RNA–Protein interactions for RNA: ENST00000538744.5

DDX55-205, Transcript of DEAD-box helicase 55, humanhuman

TSL 5 BASIC

Gene DDX55, Length 1,735 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-205ENST00000538744 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP24.24■■□□□ 1.47
DDX55-205ENST00000538744 E7EWF7 191 aa24.24■■□□□ 1.47
DDX55-205ENST00000538744 NPHP1O15259 732 aa24.24■■□□□ 1.47
DDX55-205ENST00000538744 RPS8P62241 208 aaKnown RBP24.24■■□□□ 1.47
DDX55-205ENST00000538744 IMMTQ16891 758 aaKnown RBP24.24■■□□□ 1.47
DDX55-205ENST00000538744 WWC3Q9ULE0 1092 aa24.24■■□□□ 1.47
DDX55-205ENST00000538744 ST3GAL1Q11201 340 aa24.23■■□□□ 1.47
DDX55-205ENST00000538744 NFIXQ14938 502 aa24.23■■□□□ 1.47
DDX55-205ENST00000538744 FOXD4L5Q5VV16 416 aaPredicted RBP24.23■■□□□ 1.47
DDX55-205ENST00000538744 Q6ZUG5 572 aa24.23■■□□□ 1.47
DDX55-205ENST00000538744 DHX32Q7L7V1 743 aaKnown RBP24.23■■□□□ 1.47
DDX55-205ENST00000538744 NECAB1Q8N987 351 aa24.23■■□□□ 1.47
DDX55-205ENST00000538744 FOXD4L4Q8WXT5 416 aaPredicted RBP24.23■■□□□ 1.47
DDX55-205ENST00000538744 ZNF804BA4D1E1 1349 aa24.22■■□□□ 1.47
DDX55-205ENST00000538744 TCRBV5S4A2TA0A5A2 114 aa24.22■■□□□ 1.47
DDX55-205ENST00000538744 HMGB2P26583 209 aaKnown RBP24.22■■□□□ 1.47
DDX55-205ENST00000538744 TTLL5Q6EMB2 1281 aa24.22■■□□□ 1.47
DDX55-205ENST00000538744 GNL3LQ9NVN8 582 aaKnown RBP24.22■■□□□ 1.47
DDX55-205ENST00000538744 FGAP02671 866 aa24.21■■□□□ 1.47
DDX55-205ENST00000538744 GJB2P29033 226 aa24.21■■□□□ 1.47
DDX55-205ENST00000538744 ZNF772Q68DY9 489 aaPredicted RBP24.21■■□□□ 1.47
DDX55-205ENST00000538744 A0A0G2JLW4 131 aa24.21■■□□□ 1.47
DDX55-205ENST00000538744 RBM6P78332 1123 aaKnown RBP24.21■■□□□ 1.47
DDX55-205ENST00000538744 CCDC24Q8N4L8 307 aa24.21■■□□□ 1.47
DDX55-205ENST00000538744 FGD1P98174 961 aa24.2■■□□□ 1.46
DDX55-205ENST00000538744 CNBD1Q8NA66 436 aa24.2■■□□□ 1.46
DDX55-205ENST00000538744 ANKRD2Q9GZV1 360 aa24.2■■□□□ 1.46
DDX55-205ENST00000538744 STX6O43752 255 aa24.19■■□□□ 1.46
DDX55-205ENST00000538744 SYT1P21579 422 aa24.19■■□□□ 1.46
DDX55-205ENST00000538744 EXOSC10Q01780 885 aaKnown RBP24.19■■□□□ 1.46
DDX55-205ENST00000538744 CAVIN4Q5BKX8 364 aa24.19■■□□□ 1.46
DDX55-205ENST00000538744 MAGEB6Q8N7X4 407 aa24.19■■□□□ 1.46
DDX55-205ENST00000538744 AIDAQ96BJ3 306 aa24.18■■□□□ 1.46
DDX55-205ENST00000538744 LMBRD1Q9NUN5 540 aa24.18■■□□□ 1.46
DDX55-205ENST00000538744 MYH13Q9UKX3 1938 aa24.18■■□□□ 1.46
DDX55-205ENST00000538744 ZSCAN22P10073 491 aaPredicted RBP24.18■■□□□ 1.46
DDX55-205ENST00000538744 TM4SF1P30408 202 aa24.18■■□□□ 1.46
DDX55-205ENST00000538744 GYG1P46976 350 aa24.18■■□□□ 1.46
DDX55-205ENST00000538744 GZF1Q9H116 711 aaPredicted RBP24.18■■□□□ 1.46
DDX55-205ENST00000538744 PDIA4P13667 645 aaKnown RBP24.17■■□□□ 1.46
DDX55-205ENST00000538744 GYS1P13807 737 aa24.17■■□□□ 1.46
DDX55-205ENST00000538744 BRF1Q92994 677 aa24.17■■□□□ 1.46
DDX55-205ENST00000538744 AGXT2Q9BYV1 514 aa24.17■■□□□ 1.46
DDX55-205ENST00000538744 ZNF213O14771 459 aa24.16■■□□□ 1.46
DDX55-205ENST00000538744 HAND2P61296 217 aa24.16■■□□□ 1.46
DDX55-205ENST00000538744 KLHL40Q2TBA0 621 aa24.16■■□□□ 1.46
DDX55-205ENST00000538744 VPS37DQ86XT2 251 aa24.16■■□□□ 1.46
DDX55-205ENST00000538744 GTF3C6Q969F1 213 aa24.16■■□□□ 1.46
DDX55-205ENST00000538744 STRBPQ96SI9 672 aaKnown RBP24.16■■□□□ 1.46
DDX55-205ENST00000538744 DDX49Q9Y6V7 483 aaKnown RBP24.16■■□□□ 1.46
DDX55-205ENST00000538744 STK3Q13188 491 aa24.15■■□□□ 1.46
DDX55-205ENST00000538744 TXNRD1Q16881 649 aa24.15■■□□□ 1.46
DDX55-205ENST00000538744 LRRC2Q9BYS8 371 aa24.15■■□□□ 1.46
DDX55-205ENST00000538744 LRP2BPQ9P2M1 347 aa24.15■■□□□ 1.46
DDX55-205ENST00000538744 FAM84BQ96KN1 310 aaPredicted RBP24.15■■□□□ 1.46
DDX55-205ENST00000538744 DENND2AQ9ULE3 1009 aa24.15■■□□□ 1.46
DDX55-205ENST00000538744 ZMYM6O95789 1325 aa24.15■■□□□ 1.46
DDX55-205ENST00000538744 WTIPA6NIX2 430 aaPredicted RBP24.14■■□□□ 1.45
DDX55-205ENST00000538744 MBD4O95243 580 aa24.14■■□□□ 1.45
DDX55-205ENST00000538744 APPP05067 770 aa24.14■■□□□ 1.45
DDX55-205ENST00000538744 PDCP20941 246 aa24.14■■□□□ 1.45
DDX55-205ENST00000538744 ALX1Q15699 326 aa24.14■■□□□ 1.45
DDX55-205ENST00000538744 PRR5LQ6MZQ0 368 aa24.14■■□□□ 1.45
DDX55-205ENST00000538744 IQSEC3Q9UPP2 1182 aaPredicted RBP24.14■■□□□ 1.45
DDX55-205ENST00000538744 COL1A1P02452 1464 aaPredicted RBP24.14■■□□□ 1.45
DDX55-205ENST00000538744 SEMA3EO15041 775 aa24.13■■□□□ 1.45
DDX55-205ENST00000538744 PRPF40AO75400 957 aaKnown RBP24.13■■□□□ 1.45
DDX55-205ENST00000538744 FBXO33Q7Z6M2 555 aa24.13■■□□□ 1.45
DDX55-205ENST00000538744 FBXL16Q8N461 479 aa24.13■■□□□ 1.45
DDX55-205ENST00000538744 PFKFB2O60825 505 aa24.13■■□□□ 1.45
DDX55-205ENST00000538744 F13A1P00488 732 aa24.13■■□□□ 1.45
DDX55-205ENST00000538744 ST5P78524 1137 aa24.13■■□□□ 1.45
DDX55-205ENST00000538744 GRAPQ13588 217 aa24.13■■□□□ 1.45
DDX55-205ENST00000538744 NCOA7Q8NI08 942 aa24.13■■□□□ 1.45
DDX55-205ENST00000538744 GRAPLQ8TC17 118 aaPredicted RBP24.13■■□□□ 1.45
DDX55-205ENST00000538744 ATP6V1DQ9Y5K8 247 aa24.13■■□□□ 1.45
DDX55-205ENST00000538744 RALYLQ86SE5 291 aaKnown RBP24.12■■□□□ 1.45
DDX55-205ENST00000538744 CHAMP1Q96JM3 812 aa24.12■■□□□ 1.45
DDX55-205ENST00000538744 MTMR6Q9Y217 621 aa24.12■■□□□ 1.45
DDX55-205ENST00000538744 CHD4Q14839 1912 aa24.12■■□□□ 1.45
DDX55-205ENST00000538744 PDS5AQ29RF7 1337 aaKnown RBP24.11■■□□□ 1.45
DDX55-205ENST00000538744 PNPLA7Q6ZV29 1317 aa24.11■■□□□ 1.45
DDX55-205ENST00000538744 WDR19Q8NEZ3 1342 aa24.11■■□□□ 1.45
DDX55-205ENST00000538744 PATL2C9JE40 543 aaKnown RBP24.11■■□□□ 1.45
DDX55-205ENST00000538744 GNAT2P19087 354 aa24.11■■□□□ 1.45
DDX55-205ENST00000538744 MCM5P33992 734 aa24.11■■□□□ 1.45
DDX55-205ENST00000538744 APOBRQ0VD83 1088 aa24.11■■□□□ 1.45
DDX55-205ENST00000538744 MB21D2Q8IYB1 491 aaPredicted RBP24.11■■□□□ 1.45
DDX55-205ENST00000538744 PROM2Q8N271 834 aa24.11■■□□□ 1.45
DDX55-205ENST00000538744 SERPINB2P05120 415 aa24.1■■□□□ 1.45
DDX55-205ENST00000538744 LARP1BQ659C4 914 aaKnown RBP24.1■■□□□ 1.45
DDX55-205ENST00000538744 ARMT1Q9H993 441 aa24.1■■□□□ 1.45
DDX55-205ENST00000538744 ZNF274Q96GC6 653 aaPredicted RBP24.1■■□□□ 1.45
DDX55-205ENST00000538744 LLPHQ9BRT6 129 aaKnown RBP24.1■■□□□ 1.45
DDX55-205ENST00000538744 RAI14Q9P0K7 980 aa24.1■■□□□ 1.45
DDX55-205ENST00000538744 ABCF2Q9UG63 623 aa24.1■■□□□ 1.45
DDX55-205ENST00000538744 CACNA1SQ13698 1873 aa24.1■■□□□ 1.45
DDX55-205ENST00000538744 VPS37CA5D8V6 355 aaPredicted RBP24.09■■□□□ 1.45
DDX55-205ENST00000538744 HIBADHP31937 336 aaKnown RBP24.09■■□□□ 1.45
DDX55-205ENST00000538744 TRDNQ13061 729 aa24.09■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms