RNA–Protein interactions for RNA: ENST00000538654.5

SNHG1-209, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 2,768 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-209ENST00000538654 IVLP07476 585 aa10.43□□□□□ -0.74
SNHG1-209ENST00000538654 NBPF7P0C2Y1 421 aaPredicted RBP10.43□□□□□ -0.74
SNHG1-209ENST00000538654 POLD1P28340 1107 aa10.43□□□□□ -0.74
SNHG1-209ENST00000538654 ADD1P35611 737 aaKnown RBP10.43□□□□□ -0.74
SNHG1-209ENST00000538654 EVCP57679 992 aa10.43□□□□□ -0.74
SNHG1-209ENST00000538654 SMARCC2Q8TAQ2 1214 aa10.43□□□□□ -0.74
SNHG1-209ENST00000538654 DNAAF4Q8WXU2 420 aa10.43□□□□□ -0.74
SNHG1-209ENST00000538654 MRPS27Q92552 414 aaKnown RBP10.43□□□□□ -0.74
SNHG1-209ENST00000538654 IGSF1Q8N6C5 1336 aa10.42□□□□□ -0.74
SNHG1-209ENST00000538654 NUTM2FA1L443 756 aa10.42□□□□□ -0.74
SNHG1-209ENST00000538654 ME1P48163 572 aa10.42□□□□□ -0.74
SNHG1-209ENST00000538654 BEND3Q5T5X7 828 aa10.42□□□□□ -0.74
SNHG1-209ENST00000538654 NUTM2GQ5VZR2 741 aa10.42□□□□□ -0.74
SNHG1-209ENST00000538654 AACSQ86V21 672 aa10.42□□□□□ -0.74
SNHG1-209ENST00000538654 TECPR2O15040 1411 aa10.42□□□□□ -0.74
SNHG1-209ENST00000538654 A0A1W2PQ27 194 aa10.42□□□□□ -0.74
SNHG1-209ENST00000538654 A0A1W2PQ64 194 aa10.42□□□□□ -0.74
SNHG1-209ENST00000538654 A0A1W2PQD8 194 aa10.42□□□□□ -0.74
SNHG1-209ENST00000538654 SH3BP5O60239 455 aa10.42□□□□□ -0.74
SNHG1-209ENST00000538654 HOXB7P09629 217 aa10.42□□□□□ -0.74
SNHG1-209ENST00000538654 ST5P78524 1137 aa10.42□□□□□ -0.74
SNHG1-209ENST00000538654 CEBPZQ03701 1054 aaKnown RBP10.42□□□□□ -0.74
SNHG1-209ENST00000538654 C9orf131Q5VYM1 1079 aa10.42□□□□□ -0.74
SNHG1-209ENST00000538654 USPL1Q5W0Q7 1092 aa10.42□□□□□ -0.74
SNHG1-209ENST00000538654 RINLQ6ZS11 566 aa10.42□□□□□ -0.74
SNHG1-209ENST00000538654 TCEANC2Q96MN5 208 aa10.42□□□□□ -0.74
SNHG1-209ENST00000538654 NEK1Q96PY6 1258 aa10.42□□□□□ -0.74
SNHG1-209ENST00000538654 FSD1Q9BTV5 496 aa10.42□□□□□ -0.74
SNHG1-209ENST00000538654 CARD6Q9BX69 1037 aa10.42□□□□□ -0.74
SNHG1-209ENST00000538654 MYO1BO43795 1136 aa10.41□□□□□ -0.74
SNHG1-209ENST00000538654 ZNF16P17020 682 aaPredicted RBP10.41□□□□□ -0.74
SNHG1-209ENST00000538654 TRIM65Q6PJ69 517 aa10.41□□□□□ -0.74
SNHG1-209ENST00000538654 LEKR1Q6ZMV7 388 aa10.41□□□□□ -0.74
SNHG1-209ENST00000538654 FMR1NBQ8N0W7 255 aaPredicted RBP10.41□□□□□ -0.74
SNHG1-209ENST00000538654 RABGGTAQ92696 567 aa10.41□□□□□ -0.74
SNHG1-209ENST00000538654 PHAXQ9H814 394 aaKnown RBP10.41□□□□□ -0.74
SNHG1-209ENST00000538654 KIAA1468Q9P260 1216 aa10.41□□□□□ -0.74
SNHG1-209ENST00000538654 A2ML1A8K2U0 1454 aa10.41□□□□□ -0.74
SNHG1-209ENST00000538654 RBM47A0AV96 593 aaKnown RBP10.41□□□□□ -0.74
SNHG1-209ENST00000538654 IKBKBO14920 756 aa10.41□□□□□ -0.74
SNHG1-209ENST00000538654 ADALQ6DHV7 355 aa10.41□□□□□ -0.74
SNHG1-209ENST00000538654 SRLQ86TD4 932 aa10.41□□□□□ -0.74
SNHG1-209ENST00000538654 DDX11Q96FC9 970 aa10.41□□□□□ -0.74
SNHG1-209ENST00000538654 PARP3Q9Y6F1 533 aa10.41□□□□□ -0.74
SNHG1-209ENST00000538654 A0A0D9SFI3 127 aa10.4□□□□□ -0.74
SNHG1-209ENST00000538654 PFKFB2O60825 505 aa10.4□□□□□ -0.74
SNHG1-209ENST00000538654 ALDH1L1O75891 902 aa10.4□□□□□ -0.74
SNHG1-209ENST00000538654 SEC31AO94979 1220 aaKnown RBP10.4□□□□□ -0.74
SNHG1-209ENST00000538654 ACTN2P35609 894 aa10.4□□□□□ -0.74
SNHG1-209ENST00000538654 NLRP12P59046 1061 aa10.4□□□□□ -0.74
SNHG1-209ENST00000538654 C10orf67Q8IYJ2 551 aa10.4□□□□□ -0.74
SNHG1-209ENST00000538654 G3BP2Q9UN86 482 aaKnown RBP10.4□□□□□ -0.74
SNHG1-209ENST00000538654 U3KPZ7 1027 aaPredicted RBP10.4□□□□□ -0.74
SNHG1-209ENST00000538654 TOPAZ1Q8N9V7 1692 aa10.4□□□□□ -0.74
SNHG1-209ENST00000538654 NCKAP5LQ9HCH0 1330 aa10.4□□□□□ -0.74
SNHG1-209ENST00000538654 NOP2P46087 812 aaKnown RBP10.4□□□□□ -0.74
SNHG1-209ENST00000538654 TUBB4BP68371 445 aa10.4□□□□□ -0.74
SNHG1-209ENST00000538654 BRD3Q15059 726 aa10.4□□□□□ -0.74
SNHG1-209ENST00000538654 Q6ZUG5 572 aa10.4□□□□□ -0.74
SNHG1-209ENST00000538654 ARMCX6Q7L4S7 300 aa10.4□□□□□ -0.74
SNHG1-209ENST00000538654 USP28Q96RU2 1077 aa10.4□□□□□ -0.74
SNHG1-209ENST00000538654 RRP15Q9Y3B9 282 aaKnown RBP10.4□□□□□ -0.74
SNHG1-209ENST00000538654 USP6P35125 1406 aa10.4□□□□□ -0.75
SNHG1-209ENST00000538654 CCDC151A5D8V7 595 aa10.39□□□□□ -0.75
SNHG1-209ENST00000538654 POM121CA8CG34 1229 aa10.39□□□□□ -0.75
SNHG1-209ENST00000538654 MLLT3P42568 568 aaPredicted RBP10.39□□□□□ -0.75
SNHG1-209ENST00000538654 MAP3K9P80192 1104 aa10.39□□□□□ -0.75
SNHG1-209ENST00000538654 NAALADL2Q58DX5 795 aa10.39□□□□□ -0.75
SNHG1-209ENST00000538654 MSL3Q8N5Y2 521 aaKnown RBP10.39□□□□□ -0.75
SNHG1-209ENST00000538654 GOLGA1Q92805 767 aa10.39□□□□□ -0.75
SNHG1-209ENST00000538654 MTA3Q9BTC8 594 aa10.39□□□□□ -0.75
SNHG1-209ENST00000538654 TMX1Q9H3N1 280 aa10.39□□□□□ -0.75
SNHG1-209ENST00000538654 BRMS1Q9HCU9 246 aa10.39□□□□□ -0.75
SNHG1-209ENST00000538654 GEMIN8Q9NWZ8 242 aaKnown RBP10.39□□□□□ -0.75
SNHG1-209ENST00000538654 ADAM21Q9UKJ8 722 aa10.39□□□□□ -0.75
SNHG1-209ENST00000538654 ZNF330Q9Y3S2 320 aaPredicted RBP10.39□□□□□ -0.75
SNHG1-209ENST00000538654 RICTORQ6R327 1708 aa10.39□□□□□ -0.75
SNHG1-209ENST00000538654 ABCC6O95255 1503 aa10.39□□□□□ -0.75
SNHG1-209ENST00000538654 A0A1B0GUL7 405 aa10.39□□□□□ -0.75
SNHG1-209ENST00000538654 POTEB2H3BUK9 544 aa10.39□□□□□ -0.75
SNHG1-209ENST00000538654 ARHGAP6O43182 974 aa10.39□□□□□ -0.75
SNHG1-209ENST00000538654 DHX16O60231 1041 aaKnown RBP10.39□□□□□ -0.75
SNHG1-209ENST00000538654 TAF5LO75529 589 aa10.39□□□□□ -0.75
SNHG1-209ENST00000538654 SASH3O75995 380 aa10.39□□□□□ -0.75
SNHG1-209ENST00000538654 FANCCQ00597 558 aa10.39□□□□□ -0.75
SNHG1-209ENST00000538654 DPCR1Q3MIW9 517 aa10.39□□□□□ -0.75
SNHG1-209ENST00000538654 RSRC2Q7L4I2 434 aaKnown RBP10.39□□□□□ -0.75
SNHG1-209ENST00000538654 FUT8Q9BYC5 575 aa10.39□□□□□ -0.75
SNHG1-209ENST00000538654 RTEL1Q9NZ71 1219 aa10.39□□□□□ -0.75
SNHG1-209ENST00000538654 RFX7Q2KHR2 1363 aa10.39□□□□□ -0.75
SNHG1-209ENST00000538654 NRXN3Q9Y4C0 1643 aa10.39□□□□□ -0.75
SNHG1-209ENST00000538654 PRR36Q9H6K5 1346 aa10.39□□□□□ -0.75
SNHG1-209ENST00000538654 PI4KAP2A4QPH2 592 aa10.38□□□□□ -0.75
SNHG1-209ENST00000538654 EIF3JO75822 258 aaKnown RBP10.38□□□□□ -0.75
SNHG1-209ENST00000538654 SLC3A2P08195 630 aaKnown RBP10.38□□□□□ -0.75
SNHG1-209ENST00000538654 LMAN1P49257 510 aa10.38□□□□□ -0.75
SNHG1-209ENST00000538654 PPP2R3AQ06190 1150 aa10.38□□□□□ -0.75
SNHG1-209ENST00000538654 SCRN1Q12765 414 aa10.38□□□□□ -0.75
SNHG1-209ENST00000538654 G3BP1Q13283 466 aaKnown RBP eCLIP10.38□□□□□ -0.75
SNHG1-209ENST00000538654 GNL2Q13823 731 aaKnown RBP10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms