RNA–Protein interactions for RNA: ENST00000538596.6

CPNE8-203, Transcript of copine 8, humanhuman

TSL 1 (best) BASIC

Gene CPNE8, Length 2,875 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE8-203ENST00000538596 PCDHA7Q9UN72 937 aa14.01□□□□□ -0.17
CPNE8-203ENST00000538596 KIF3AQ9Y496 699 aa14.01□□□□□ -0.17
CPNE8-203ENST00000538596 PARP4Q9UKK3 1724 aaKnown RBP14□□□□□ -0.17
CPNE8-203ENST00000538596 PRC1O43663 620 aa14□□□□□ -0.17
CPNE8-203ENST00000538596 GPTP24298 496 aa14□□□□□ -0.17
CPNE8-203ENST00000538596 DNAJC10Q8IXB1 793 aa14□□□□□ -0.17
CPNE8-203ENST00000538596 ZMYND15Q9H091 742 aa14□□□□□ -0.17
CPNE8-203ENST00000538596 CLIC4Q9Y696 253 aa14□□□□□ -0.17
CPNE8-203ENST00000538596 DCCP43146 1447 aa14□□□□□ -0.17
CPNE8-203ENST00000538596 KLF18A0A0U1RQI7 1052 aa14□□□□□ -0.17
CPNE8-203ENST00000538596 GOLGA6L19H0YKK7 550 aa14□□□□□ -0.17
CPNE8-203ENST00000538596 KINO60870 393 aaKnown RBP14□□□□□ -0.17
CPNE8-203ENST00000538596 ANTXR2P58335 489 aa14□□□□□ -0.17
CPNE8-203ENST00000538596 ZNF396Q96N95 335 aaPredicted RBP14□□□□□ -0.17
CPNE8-203ENST00000538596 BCL2L12Q9HB09 334 aa14□□□□□ -0.17
CPNE8-203ENST00000538596 ATG3Q9NT62 314 aa14□□□□□ -0.17
CPNE8-203ENST00000538596 FAM160A1Q05DH4 1040 aa13.99□□□□□ -0.17
CPNE8-203ENST00000538596 IMMTQ16891 758 aaKnown RBP13.99□□□□□ -0.17
CPNE8-203ENST00000538596 HPS5Q9UPZ3 1129 aa13.99□□□□□ -0.17
CPNE8-203ENST00000538596 GOLGA8BA8MQT2 603 aa13.99□□□□□ -0.17
CPNE8-203ENST00000538596 NKX1-1Q15270 411 aaPredicted RBP13.99□□□□□ -0.17
CPNE8-203ENST00000538596 STX1AQ16623 288 aa13.99□□□□□ -0.17
CPNE8-203ENST00000538596 DHX40Q8IX18 779 aaKnown RBP13.99□□□□□ -0.17
CPNE8-203ENST00000538596 HLFQ16534 295 aa13.98□□□□□ -0.17
CPNE8-203ENST00000538596 MB21D2Q8IYB1 491 aaPredicted RBP13.98□□□□□ -0.17
CPNE8-203ENST00000538596 BCL11BQ9C0K0 894 aaPredicted RBP13.98□□□□□ -0.17
CPNE8-203ENST00000538596 COL5A2P05997 1499 aaPredicted RBP13.98□□□□□ -0.17
CPNE8-203ENST00000538596 GPAA1O43292 621 aa13.98□□□□□ -0.17
CPNE8-203ENST00000538596 MCAMP43121 646 aa13.98□□□□□ -0.17
CPNE8-203ENST00000538596 NDUFA8P51970 172 aa13.98□□□□□ -0.17
CPNE8-203ENST00000538596 IFIT5Q13325 482 aaKnown RBP13.98□□□□□ -0.17
CPNE8-203ENST00000538596 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.98□□□□□ -0.17
CPNE8-203ENST00000538596 KAT6BQ8WYB5 2073 aa13.98□□□□□ -0.17
CPNE8-203ENST00000538596 KIF28PB7ZC32 967 aa13.97□□□□□ -0.17
CPNE8-203ENST00000538596 RXRAP19793 462 aa13.97□□□□□ -0.17
CPNE8-203ENST00000538596 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.97□□□□□ -0.17
CPNE8-203ENST00000538596 C8orf76Q96K31 380 aa13.97□□□□□ -0.17
CPNE8-203ENST00000538596 AIFM3Q96NN9 605 aa13.97□□□□□ -0.17
CPNE8-203ENST00000538596 TMOD3Q9NYL9 352 aa13.97□□□□□ -0.17
CPNE8-203ENST00000538596 ORC3Q9UBD5 711 aaPredicted RBP13.97□□□□□ -0.17
CPNE8-203ENST00000538596 AKAP2Q9Y2D5 859 aa13.97□□□□□ -0.17
CPNE8-203ENST00000538596 PLEKHG2Q9H7P9 1386 aa13.97□□□□□ -0.17
CPNE8-203ENST00000538596 BECN2A8MW95 431 aa13.97□□□□□ -0.17
CPNE8-203ENST00000538596 EVCP57679 992 aa13.97□□□□□ -0.17
CPNE8-203ENST00000538596 FMR1NBQ8N0W7 255 aaPredicted RBP13.97□□□□□ -0.17
CPNE8-203ENST00000538596 AOPEPQ8N6M6 819 aa13.97□□□□□ -0.17
CPNE8-203ENST00000538596 APPBP2Q92624 585 aa13.97□□□□□ -0.17
CPNE8-203ENST00000538596 GREM2Q9H772 168 aa13.97□□□□□ -0.17
CPNE8-203ENST00000538596 CTNNA3Q9UI47 895 aa13.97□□□□□ -0.17
CPNE8-203ENST00000538596 CTAGE5O15320 804 aa13.97□□□□□ -0.17
CPNE8-203ENST00000538596 CHAF1AQ13111 956 aaPredicted RBP13.97□□□□□ -0.17
CPNE8-203ENST00000538596 METTL24Q5JXM2 366 aa13.97□□□□□ -0.17
CPNE8-203ENST00000538596 FILIP1Q7Z7B0 1213 aa13.97□□□□□ -0.17
CPNE8-203ENST00000538596 LINC00301Q8NCQ3 95 aa13.97□□□□□ -0.17
CPNE8-203ENST00000538596 MRPS27Q92552 414 aaKnown RBP13.97□□□□□ -0.17
CPNE8-203ENST00000538596 SDF4Q9BRK5 362 aa13.97□□□□□ -0.17
CPNE8-203ENST00000538596 NBPF3Q9H094 633 aa13.97□□□□□ -0.17
CPNE8-203ENST00000538596 STK38Q15208 465 aa13.96□□□□□ -0.17
CPNE8-203ENST00000538596 ATP2B3Q16720 1220 aa13.96□□□□□ -0.17
CPNE8-203ENST00000538596 PIGBQ92521 554 aa13.96□□□□□ -0.17
CPNE8-203ENST00000538596 RTEL1Q9NZ71 1219 aa13.96□□□□□ -0.17
CPNE8-203ENST00000538596 TNS2Q63HR2 1409 aa13.96□□□□□ -0.17
CPNE8-203ENST00000538596 USP27XA6NNY8 438 aa13.96□□□□□ -0.18
CPNE8-203ENST00000538596 ZNF213O14771 459 aa13.96□□□□□ -0.18
CPNE8-203ENST00000538596 PCCAP05165 728 aaPredicted RBP13.96□□□□□ -0.18
CPNE8-203ENST00000538596 CSF1RP07333 972 aa13.96□□□□□ -0.18
CPNE8-203ENST00000538596 ITGA6P23229 1130 aa13.96□□□□□ -0.18
CPNE8-203ENST00000538596 EVA1CP58658 441 aa13.96□□□□□ -0.18
CPNE8-203ENST00000538596 SF3A1Q15459 793 aaKnown RBP13.96□□□□□ -0.18
CPNE8-203ENST00000538596 LDHAL6AQ6ZMR3 332 aa13.96□□□□□ -0.18
CPNE8-203ENST00000538596 ZBTB38Q8NAP3 1195 aaPredicted RBP13.96□□□□□ -0.18
CPNE8-203ENST00000538596 FBXO18Q8NFZ0 1043 aa13.96□□□□□ -0.18
CPNE8-203ENST00000538596 CARD10Q9BWT7 1032 aa13.96□□□□□ -0.18
CPNE8-203ENST00000538596 SENP2Q9HC62 589 aa13.96□□□□□ -0.18
CPNE8-203ENST00000538596 CPLX1O14810 134 aa13.95□□□□□ -0.18
CPNE8-203ENST00000538596 KIF6Q6ZMV9 814 aa13.95□□□□□ -0.18
CPNE8-203ENST00000538596 MTERF4Q7Z6M4 381 aaKnown RBP13.95□□□□□ -0.18
CPNE8-203ENST00000538596 RALYLQ86SE5 291 aaKnown RBP13.95□□□□□ -0.18
CPNE8-203ENST00000538596 NCOA7Q8NI08 942 aa13.95□□□□□ -0.18
CPNE8-203ENST00000538596 INCENPQ9NQS7 918 aa13.95□□□□□ -0.18
CPNE8-203ENST00000538596 RIPOR2Q9Y4F9 1068 aa13.95□□□□□ -0.18
CPNE8-203ENST00000538596 RIC1Q4ADV7 1423 aa13.95□□□□□ -0.18
CPNE8-203ENST00000538596 PAPPAQ13219 1627 aa13.95□□□□□ -0.18
CPNE8-203ENST00000538596 SPEF2Q9C093 1822 aa13.95□□□□□ -0.18
CPNE8-203ENST00000538596 BIN1O00499 593 aa13.95□□□□□ -0.18
CPNE8-203ENST00000538596 CAVIN2O95810 425 aa13.95□□□□□ -0.18
CPNE8-203ENST00000538596 ZFYP08048 801 aaPredicted RBP13.95□□□□□ -0.18
CPNE8-203ENST00000538596 TNNT1P13805 278 aa13.95□□□□□ -0.18
CPNE8-203ENST00000538596 SLC9C2Q5TAH2 1124 aa13.95□□□□□ -0.18
CPNE8-203ENST00000538596 ATL3Q6DD88 541 aa13.95□□□□□ -0.18
CPNE8-203ENST00000538596 ADALQ6DHV7 355 aa13.95□□□□□ -0.18
CPNE8-203ENST00000538596 SARM1Q6SZW1 724 aa13.95□□□□□ -0.18
CPNE8-203ENST00000538596 LRRC8AQ8IWT6 810 aa13.95□□□□□ -0.18
CPNE8-203ENST00000538596 FBXL16Q8N461 479 aa13.95□□□□□ -0.18
CPNE8-203ENST00000538596 SHANK3Q9BYB0 1731 aa13.95□□□□□ -0.18
CPNE8-203ENST00000538596 ANO10Q9NW15 660 aa13.95□□□□□ -0.18
CPNE8-203ENST00000538596 DPCR1Q3MIW9 517 aa13.94□□□□□ -0.18
CPNE8-203ENST00000538596 TBC1D10CQ8IV04 446 aa13.94□□□□□ -0.18
CPNE8-203ENST00000538596 TTLL11Q8NHH1 800 aa13.94□□□□□ -0.18
CPNE8-203ENST00000538596 MYO5AQ9Y4I1 1855 aaKnown RBP13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms