RNA–Protein interactions for RNA: ENST00000538492.5

RAB40C-204, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RAB40C, Length 2,569 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-204ENST00000538492 PDE8BO95263 885 aa29.25■■■□□ 2.27
RAB40C-204ENST00000538492 FAM177BA6PVY3 158 aa29.25■■■□□ 2.27
RAB40C-204ENST00000538492 CLSTN2Q9H4D0 955 aa29.25■■■□□ 2.27
RAB40C-204ENST00000538492 MYO5AQ9Y4I1 1855 aaKnown RBP29.25■■■□□ 2.27
RAB40C-204ENST00000538492 IDH1O75874 414 aaKnown RBP29.24■■■□□ 2.27
RAB40C-204ENST00000538492 IL6STP40189 918 aaPredicted RBP29.24■■■□□ 2.27
RAB40C-204ENST00000538492 RAB11FIP4Q86YS3 637 aa29.24■■■□□ 2.27
RAB40C-204ENST00000538492 MYH15Q9Y2K3 1946 aa29.24■■■□□ 2.27
RAB40C-204ENST00000538492 ZNF213O14771 459 aa29.24■■■□□ 2.27
RAB40C-204ENST00000538492 PIH1D3Q9NQM4 214 aaKnown RBP29.24■■■□□ 2.27
RAB40C-204ENST00000538492 CARMIL3Q8ND23 1372 aa29.24■■■□□ 2.27
RAB40C-204ENST00000538492 PHKA1P46020 1223 aa29.23■■■□□ 2.27
RAB40C-204ENST00000538492 FDPSP14324 419 aaKnown RBP29.23■■■□□ 2.27
RAB40C-204ENST00000538492 ADD2P35612 726 aa29.23■■■□□ 2.27
RAB40C-204ENST00000538492 MB21D2Q8IYB1 491 aaPredicted RBP29.23■■■□□ 2.27
RAB40C-204ENST00000538492 FAM200AQ8TCP9 573 aa29.23■■■□□ 2.27
RAB40C-204ENST00000538492 ERVV-1B6SEH8 477 aa29.22■■■□□ 2.27
RAB40C-204ENST00000538492 CCDC102BQ68D86 513 aa29.22■■■□□ 2.27
RAB40C-204ENST00000538492 TTC12Q9H892 705 aaPredicted RBP29.22■■■□□ 2.27
RAB40C-204ENST00000538492 KLF18A0A0U1RQI7 1052 aa29.22■■■□□ 2.27
RAB40C-204ENST00000538492 RALYLQ86SE5 291 aaKnown RBP29.22■■■□□ 2.27
RAB40C-204ENST00000538492 LUZP1Q86V48 1076 aa29.22■■■□□ 2.27
RAB40C-204ENST00000538492 FBXL16Q8N461 479 aa29.22■■■□□ 2.27
RAB40C-204ENST00000538492 NCOA7Q8NI08 942 aa29.22■■■□□ 2.27
RAB40C-204ENST00000538492 USP28Q96RU2 1077 aa29.22■■■□□ 2.27
RAB40C-204ENST00000538492 R3HCC1Q9Y3T6 440 aaKnown RBP29.22■■■□□ 2.27
RAB40C-204ENST00000538492 EVCP57679 992 aa29.21■■■□□ 2.27
RAB40C-204ENST00000538492 ANTXR2P58335 489 aa29.21■■■□□ 2.27
RAB40C-204ENST00000538492 ANO6Q4KMQ2 910 aa29.21■■■□□ 2.27
RAB40C-204ENST00000538492 ZNF34Q8IZ26 560 aa29.21■■■□□ 2.27
RAB40C-204ENST00000538492 DENND2AQ9ULE3 1009 aa29.2■■■□□ 2.27
RAB40C-204ENST00000538492 DOT1LQ8TEK3 1739 aa29.2■■■□□ 2.27
RAB40C-204ENST00000538492 GOLGA8BA8MQT2 603 aa29.2■■■□□ 2.26
RAB40C-204ENST00000538492 KIAA2012Q0VF49 1180 aa29.2■■■□□ 2.26
RAB40C-204ENST00000538492 ZSCAN25Q6NSZ9 544 aa29.2■■■□□ 2.26
RAB40C-204ENST00000538492 COL16A1Q07092 1604 aaPredicted RBP29.2■■■□□ 2.26
RAB40C-204ENST00000538492 SNAP23O00161 211 aa29.19■■■□□ 2.26
RAB40C-204ENST00000538492 APPP05067 770 aa29.19■■■□□ 2.26
RAB40C-204ENST00000538492 TTF1Q15361 905 aaPredicted RBP29.19■■■□□ 2.26
RAB40C-204ENST00000538492 OTUD7BQ6GQQ9 843 aa29.19■■■□□ 2.26
RAB40C-204ENST00000538492 ACSBG1Q96GR2 724 aa29.19■■■□□ 2.26
RAB40C-204ENST00000538492 ZNF512BQ96KM6 892 aaPredicted RBP29.19■■■□□ 2.26
RAB40C-204ENST00000538492 SLIT2O94813 1529 aa29.19■■■□□ 2.26
RAB40C-204ENST00000538492 RBM43Q6ZSC3 357 aaKnown RBP29.19■■■□□ 2.26
RAB40C-204ENST00000538492 ILDR1Q86SU0 546 aaPredicted RBP29.19■■■□□ 2.26
RAB40C-204ENST00000538492 RCOR1Q9UKL0 485 aa29.19■■■□□ 2.26
RAB40C-204ENST00000538492 PLCH1Q4KWH8 1693 aa29.18■■■□□ 2.26
RAB40C-204ENST00000538492 ZNF532Q9HCE3 1301 aa29.18■■■□□ 2.26
RAB40C-204ENST00000538492 SUSD4Q5VX71 490 aa29.18■■■□□ 2.26
RAB40C-204ENST00000538492 NBPF3Q9H094 633 aa29.18■■■□□ 2.26
RAB40C-204ENST00000538492 WWC3Q9ULE0 1092 aa29.18■■■□□ 2.26
RAB40C-204ENST00000538492 HPS5Q9UPZ3 1129 aa29.18■■■□□ 2.26
RAB40C-204ENST00000538492 ROBO1Q9Y6N7 1651 aa29.17■■■□□ 2.26
RAB40C-204ENST00000538492 ADAMTS2O95450 1211 aa29.17■■■□□ 2.26
RAB40C-204ENST00000538492 PUM3Q15397 648 aaKnown RBP29.17■■■□□ 2.26
RAB40C-204ENST00000538492 SASS6Q6UVJ0 657 aa29.17■■■□□ 2.26
RAB40C-204ENST00000538492 CCAR1Q8IX12 1150 aaKnown RBP29.17■■■□□ 2.26
RAB40C-204ENST00000538492 CBX8Q9HC52 389 aa29.17■■■□□ 2.26
RAB40C-204ENST00000538492 SPC24Q8NBT2 197 aa29.16■■■□□ 2.26
RAB40C-204ENST00000538492 NKX2-3Q8TAU0 364 aa29.16■■■□□ 2.26
RAB40C-204ENST00000538492 CHMP4CQ96CF2 233 aa29.16■■■□□ 2.26
RAB40C-204ENST00000538492 ZNF396Q96N95 335 aaPredicted RBP29.16■■■□□ 2.26
RAB40C-204ENST00000538492 PDE6AP16499 860 aa29.16■■■□□ 2.26
RAB40C-204ENST00000538492 EIF5P55010 431 aaKnown RBP29.16■■■□□ 2.26
RAB40C-204ENST00000538492 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP29.15■■■□□ 2.26
RAB40C-204ENST00000538492 ARID4AP29374 1257 aaPredicted RBP29.15■■■□□ 2.26
RAB40C-204ENST00000538492 LPIN2Q92539 896 aa29.15■■■□□ 2.26
RAB40C-204ENST00000538492 GOLPH3LQ9H4A5 285 aa29.15■■■□□ 2.26
RAB40C-204ENST00000538492 ATP6V1AP38606 617 aa29.15■■■□□ 2.26
RAB40C-204ENST00000538492 INTS5Q6P9B9 1019 aaKnown RBP29.15■■■□□ 2.26
RAB40C-204ENST00000538492 TBC1D10CQ8IV04 446 aa29.15■■■□□ 2.26
RAB40C-204ENST00000538492 SEC31BQ9NQW1 1179 aa29.15■■■□□ 2.26
RAB40C-204ENST00000538492 UBE3CQ15386 1083 aa29.14■■■□□ 2.26
RAB40C-204ENST00000538492 TPM2P07951 284 aa29.14■■■□□ 2.26
RAB40C-204ENST00000538492 TRDNQ13061 729 aa29.14■■■□□ 2.26
RAB40C-204ENST00000538492 DNAJC25Q9H1X3 360 aa29.14■■■□□ 2.26
RAB40C-204ENST00000538492 GJB4Q9NTQ9 266 aa29.14■■■□□ 2.26
RAB40C-204ENST00000538492 MROH5Q6ZUA9 1318 aa29.14■■■□□ 2.25
RAB40C-204ENST00000538492 CPLX1O14810 134 aa29.13■■■□□ 2.25
RAB40C-204ENST00000538492 CRKLP46109 303 aaKnown RBP29.13■■■□□ 2.25
RAB40C-204ENST00000538492 ME1P48163 572 aa29.13■■■□□ 2.25
RAB40C-204ENST00000538492 DDB1Q16531 1140 aa29.13■■■□□ 2.25
RAB40C-204ENST00000538492 C8orf76Q96K31 380 aa29.13■■■□□ 2.25
RAB40C-204ENST00000538492 CCDC87Q9NVE4 849 aa29.13■■■□□ 2.25
RAB40C-204ENST00000538492 ORC3Q9UBD5 711 aaPredicted RBP29.13■■■□□ 2.25
RAB40C-204ENST00000538492 DHX16O60231 1041 aaKnown RBP29.13■■■□□ 2.25
RAB40C-204ENST00000538492 UQCRFS1P1P0C7P4 283 aa29.13■■■□□ 2.25
RAB40C-204ENST00000538492 FGFR2P21802 821 aa29.13■■■□□ 2.25
RAB40C-204ENST00000538492 WNK3Q9BYP7 1800 aa29.13■■■□□ 2.25
RAB40C-204ENST00000538492 ATRNO75882 1429 aa29.12■■■□□ 2.25
RAB40C-204ENST00000538492 C17orf53Q8N3J3 647 aaPredicted RBP29.12■■■□□ 2.25
RAB40C-204ENST00000538492 MPHOSPH8Q99549 860 aa29.12■■■□□ 2.25
RAB40C-204ENST00000538492 POLR3DP05423 398 aaPredicted RBP29.11■■■□□ 2.25
RAB40C-204ENST00000538492 CYB5R4Q7L1T6 521 aa29.11■■■□□ 2.25
RAB40C-204ENST00000538492 SPATA5Q8NB90 893 aa29.11■■■□□ 2.25
RAB40C-204ENST00000538492 AIDAQ96BJ3 306 aa29.11■■■□□ 2.25
RAB40C-204ENST00000538492 TCRBV5S4A2TA0A5A2 114 aa29.11■■■□□ 2.25
RAB40C-204ENST00000538492 ATL3Q6DD88 541 aa29.11■■■□□ 2.25
RAB40C-204ENST00000538492 DDX60Q8IY21 1712 aaKnown RBP29.11■■■□□ 2.25
RAB40C-204ENST00000538492 ZNF165P49910 485 aa29.1■■■□□ 2.25
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms