RNA–Protein interactions for RNA: ENST00000538077.2

LINC00346-201, long intergenic non-protein coding RNA 346, humanhuman

BASIC

Gene LINC00346, Length 6,265 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00346-201ENST00000538077 ANKRD2Q9GZV1 360 aa12.73□□□□□ -0.37
LINC00346-201ENST00000538077 A0A1W2PRG0 241 aa12.72□□□□□ -0.37
LINC00346-201ENST00000538077 FSD2A1L4K1 749 aa12.72□□□□□ -0.37
LINC00346-201ENST00000538077 ITGA6P23229 1130 aa12.72□□□□□ -0.37
LINC00346-201ENST00000538077 ZNF165P49910 485 aa12.72□□□□□ -0.37
LINC00346-201ENST00000538077 DCAF17Q5H9S7 520 aaPredicted RBP12.72□□□□□ -0.37
LINC00346-201ENST00000538077 TRERF1Q96PN7 1200 aa12.72□□□□□ -0.37
LINC00346-201ENST00000538077 A2MP01023 1474 aa12.72□□□□□ -0.37
LINC00346-201ENST00000538077 AKR1B10O60218 316 aa12.72□□□□□ -0.37
LINC00346-201ENST00000538077 MYCLP12524 364 aaPredicted RBP12.72□□□□□ -0.37
LINC00346-201ENST00000538077 FCHSD1Q86WN1 690 aa12.72□□□□□ -0.37
LINC00346-201ENST00000538077 TEX11Q8IYF3 940 aa12.72□□□□□ -0.37
LINC00346-201ENST00000538077 TMOD4Q9NZQ9 345 aa12.72□□□□□ -0.37
LINC00346-201ENST00000538077 DNM1Q05193 864 aaKnown RBP12.72□□□□□ -0.37
LINC00346-201ENST00000538077 BMP2KLQ5H9B9 411 aa12.72□□□□□ -0.37
LINC00346-201ENST00000538077 KLHDC4Q8TBB5 520 aa12.72□□□□□ -0.37
LINC00346-201ENST00000538077 PYM1Q9BRP8 204 aaKnown RBP12.72□□□□□ -0.37
LINC00346-201ENST00000538077 GINS2Q9Y248 185 aa12.72□□□□□ -0.37
LINC00346-201ENST00000538077 KIAA0753Q2KHM9 967 aa12.72□□□□□ -0.37
LINC00346-201ENST00000538077 EYA1Q99502 592 aa12.72□□□□□ -0.37
LINC00346-201ENST00000538077 NAA15Q9BXJ9 866 aaKnown RBP12.72□□□□□ -0.37
LINC00346-201ENST00000538077 FERP16591 822 aa12.72□□□□□ -0.37
LINC00346-201ENST00000538077 ZNF174Q15697 407 aa12.72□□□□□ -0.37
LINC00346-201ENST00000538077 KRT5P13647 590 aa12.71□□□□□ -0.37
LINC00346-201ENST00000538077 KCNA6P17658 529 aa12.71□□□□□ -0.37
LINC00346-201ENST00000538077 GNG11P61952 73 aa12.71□□□□□ -0.37
LINC00346-201ENST00000538077 ZSCAN30Q86W11 494 aa12.71□□□□□ -0.37
LINC00346-201ENST00000538077 POLKQ9UBT6 870 aa12.71□□□□□ -0.37
LINC00346-201ENST00000538077 PTPDC1A2A3K4 754 aa12.71□□□□□ -0.37
LINC00346-201ENST00000538077 UBE2HP62256 183 aa12.71□□□□□ -0.37
LINC00346-201ENST00000538077 APBB1IPQ7Z5R6 666 aaPredicted RBP12.71□□□□□ -0.37
LINC00346-201ENST00000538077 CAPZA3Q96KX2 299 aa12.71□□□□□ -0.37
LINC00346-201ENST00000538077 IMPG2Q9BZV3 1241 aa12.71□□□□□ -0.37
LINC00346-201ENST00000538077 APBA3O96018 575 aa12.71□□□□□ -0.37
LINC00346-201ENST00000538077 USH1GQ495M9 461 aa12.71□□□□□ -0.37
LINC00346-201ENST00000538077 LRSAM1Q6UWE0 723 aa12.71□□□□□ -0.37
LINC00346-201ENST00000538077 TMTC2Q8N394 836 aa12.71□□□□□ -0.37
LINC00346-201ENST00000538077 ZSCAN16Q9H4T2 348 aaPredicted RBP12.71□□□□□ -0.37
LINC00346-201ENST00000538077 AATFQ9NY61 560 aaKnown RBP eCLIP12.71□□□□□ -0.37
LINC00346-201ENST00000538077 UGGT2Q9NYU1 1516 aa12.71□□□□□ -0.38
LINC00346-201ENST00000538077 RTL1A6NKG5 1358 aa12.71□□□□□ -0.38
LINC00346-201ENST00000538077 MCM3P25205 808 aa12.71□□□□□ -0.38
LINC00346-201ENST00000538077 CEP135Q66GS9 1140 aa12.71□□□□□ -0.38
LINC00346-201ENST00000538077 CCDC63Q8NA47 563 aa12.71□□□□□ -0.38
LINC00346-201ENST00000538077 NOD1Q9Y239 953 aa12.71□□□□□ -0.38
LINC00346-201ENST00000538077 DUOX2Q9NRD8 1548 aa12.7□□□□□ -0.38
LINC00346-201ENST00000538077 ZMYND15Q9H091 742 aa12.7□□□□□ -0.38
LINC00346-201ENST00000538077 C19orf44Q9H6X5 657 aa12.7□□□□□ -0.38
LINC00346-201ENST00000538077 SMIM23A6NLE4 172 aa12.7□□□□□ -0.38
LINC00346-201ENST00000538077 DNAJC25Q9H1X3 360 aa12.7□□□□□ -0.38
LINC00346-201ENST00000538077 LETM2Q2VYF4 491 aa12.7□□□□□ -0.38
LINC00346-201ENST00000538077 NDUFB9Q9Y6M9 179 aa12.7□□□□□ -0.38
LINC00346-201ENST00000538077 CCNT1O60563 726 aaKnown RBP12.7□□□□□ -0.38
LINC00346-201ENST00000538077 ALDH1L1O75891 902 aa12.7□□□□□ -0.38
LINC00346-201ENST00000538077 CPA1P15085 419 aa12.7□□□□□ -0.38
LINC00346-201ENST00000538077 UBXN1Q04323 297 aa12.7□□□□□ -0.38
LINC00346-201ENST00000538077 KRT79Q5XKE5 535 aa12.7□□□□□ -0.38
LINC00346-201ENST00000538077 GPIHBP1Q8IV16 184 aa12.7□□□□□ -0.38
LINC00346-201ENST00000538077 DCAF5Q96JK2 942 aa12.7□□□□□ -0.38
LINC00346-201ENST00000538077 PCDHB15Q9Y5E8 787 aa12.7□□□□□ -0.38
LINC00346-201ENST00000538077 KRT9P35527 623 aa12.69□□□□□ -0.38
LINC00346-201ENST00000538077 GNAQP50148 359 aa12.69□□□□□ -0.38
LINC00346-201ENST00000538077 RAPGEF1Q13905 1077 aa12.69□□□□□ -0.38
LINC00346-201ENST00000538077 PHACTR3Q96KR7 559 aa12.69□□□□□ -0.38
LINC00346-201ENST00000538077 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP12.69□□□□□ -0.38
LINC00346-201ENST00000538077 GNAT2P19087 354 aa12.69□□□□□ -0.38
LINC00346-201ENST00000538077 CTDSPL2Q05D32 466 aa12.69□□□□□ -0.38
LINC00346-201ENST00000538077 CREB3L3Q68CJ9 461 aa12.69□□□□□ -0.38
LINC00346-201ENST00000538077 RALGAPBQ86X10 1494 aa12.69□□□□□ -0.38
LINC00346-201ENST00000538077 IL16Q14005 1332 aa12.69□□□□□ -0.38
LINC00346-201ENST00000538077 DTNBO60941 627 aa12.69□□□□□ -0.38
LINC00346-201ENST00000538077 CCDC172P0C7W6 258 aa12.69□□□□□ -0.38
LINC00346-201ENST00000538077 GSDMDP57764 484 aa12.69□□□□□ -0.38
LINC00346-201ENST00000538077 ORAI2Q96SN7 254 aa12.69□□□□□ -0.38
LINC00346-201ENST00000538077 GGA1Q9UJY5 639 aa12.69□□□□□ -0.38
LINC00346-201ENST00000538077 FLT4P35916 1363 aa12.69□□□□□ -0.38
LINC00346-201ENST00000538077 CCDC169A6NNP5 214 aa12.69□□□□□ -0.38
LINC00346-201ENST00000538077 USP21Q9UK80 565 aa12.69□□□□□ -0.38
LINC00346-201ENST00000538077 GPATCH8Q9UKJ3 1502 aaKnown RBP12.69□□□□□ -0.38
LINC00346-201ENST00000538077 B4E1Z4 1266 aa12.69□□□□□ -0.38
LINC00346-201ENST00000538077 PLCG2P16885 1265 aa12.69□□□□□ -0.38
LINC00346-201ENST00000538077 PRIM1P49642 420 aaKnown RBP12.69□□□□□ -0.38
LINC00346-201ENST00000538077 PLCB3Q01970 1234 aa12.69□□□□□ -0.38
LINC00346-201ENST00000538077 PPP4R3BQ5MIZ7 849 aa12.69□□□□□ -0.38
LINC00346-201ENST00000538077 USP37Q86T82 979 aa12.69□□□□□ -0.38
LINC00346-201ENST00000538077 LARGE2Q8N3Y3 721 aa12.69□□□□□ -0.38
LINC00346-201ENST00000538077 KIF2AO00139 706 aaPredicted RBP12.68□□□□□ -0.38
LINC00346-201ENST00000538077 CTNND2Q9UQB3 1225 aa12.68□□□□□ -0.38
LINC00346-201ENST00000538077 H0YIN7 160 aa12.68□□□□□ -0.38
LINC00346-201ENST00000538077 AK2P54819 239 aa12.68□□□□□ -0.38
LINC00346-201ENST00000538077 TIMM10P62072 90 aa12.68□□□□□ -0.38
LINC00346-201ENST00000538077 MRPS27Q92552 414 aaKnown RBP12.68□□□□□ -0.38
LINC00346-201ENST00000538077 SLTMQ9NWH9 1034 aaKnown RBP eCLIP12.68□□□□□ -0.38
LINC00346-201ENST00000538077 VWA3AA6NCI4 1184 aa12.68□□□□□ -0.38
LINC00346-201ENST00000538077 HIBADHP31937 336 aaKnown RBP12.68□□□□□ -0.38
LINC00346-201ENST00000538077 IFI16Q16666 785 aaKnown RBP12.68□□□□□ -0.38
LINC00346-201ENST00000538077 DPP8Q6V1X1 898 aaPredicted RBP12.68□□□□□ -0.38
LINC00346-201ENST00000538077 KAT6BQ8WYB5 2073 aa12.68□□□□□ -0.38
LINC00346-201ENST00000538077 HSF2BPO75031 334 aa12.68□□□□□ -0.38
LINC00346-201ENST00000538077 KCNG4Q8TDN1 519 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms