RNA–Protein interactions for RNA: ENST00000538070.1

UBE3B-208, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 5

Gene UBE3B, Length 3,655 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-208ENST00000538070 VPS37DQ86XT2 251 aa10.21□□□□□ -0.78
UBE3B-208ENST00000538070 FSIP1Q8NA03 581 aa10.21□□□□□ -0.78
UBE3B-208ENST00000538070 TSC1Q92574 1164 aa10.21□□□□□ -0.78
UBE3B-208ENST00000538070 CTNNA3Q9UI47 895 aa10.21□□□□□ -0.78
UBE3B-208ENST00000538070 NOL7Q9UMY1 257 aaKnown RBP10.21□□□□□ -0.78
UBE3B-208ENST00000538070 CPDO75976 1380 aa10.2□□□□□ -0.78
UBE3B-208ENST00000538070 BECN2A8MW95 431 aa10.2□□□□□ -0.78
UBE3B-208ENST00000538070 HMGB1P09429 215 aaKnown RBP10.2□□□□□ -0.78
UBE3B-208ENST00000538070 USPL1Q5W0Q7 1092 aa10.2□□□□□ -0.78
UBE3B-208ENST00000538070 NUP133Q8WUM0 1156 aa10.2□□□□□ -0.78
UBE3B-208ENST00000538070 KIF3AQ9Y496 699 aa10.2□□□□□ -0.78
UBE3B-208ENST00000538070 CTDNEP1O95476 244 aa10.2□□□□□ -0.78
UBE3B-208ENST00000538070 MCM5P33992 734 aa10.2□□□□□ -0.78
UBE3B-208ENST00000538070 TDO2P48775 406 aa10.2□□□□□ -0.78
UBE3B-208ENST00000538070 SUSD4Q5VX71 490 aa10.2□□□□□ -0.78
UBE3B-208ENST00000538070 DSCC1Q9BVC3 393 aa10.2□□□□□ -0.78
UBE3B-208ENST00000538070 GOLGA6L19H0YKK7 550 aa10.2□□□□□ -0.78
UBE3B-208ENST00000538070 PRKAB2O43741 272 aa10.2□□□□□ -0.78
UBE3B-208ENST00000538070 KINO60870 393 aaKnown RBP10.2□□□□□ -0.78
UBE3B-208ENST00000538070 SYNE3Q6ZMZ3 975 aa10.2□□□□□ -0.78
UBE3B-208ENST00000538070 NCOA7Q8NI08 942 aa10.2□□□□□ -0.78
UBE3B-208ENST00000538070 APPBP2Q92624 585 aa10.2□□□□□ -0.78
UBE3B-208ENST00000538070 CFAP45Q9UL16 551 aa10.2□□□□□ -0.78
UBE3B-208ENST00000538070 SH3TC1Q8TE82 1336 aa10.2□□□□□ -0.78
UBE3B-208ENST00000538070 PFKFB2O60825 505 aa10.19□□□□□ -0.78
UBE3B-208ENST00000538070 MBD4O95243 580 aa10.19□□□□□ -0.78
UBE3B-208ENST00000538070 ZNF165P49910 485 aa10.19□□□□□ -0.78
UBE3B-208ENST00000538070 PDZRN4Q6ZMN7 1036 aaPredicted RBP10.19□□□□□ -0.78
UBE3B-208ENST00000538070 NAPBQ9H115 298 aa10.19□□□□□ -0.78
UBE3B-208ENST00000538070 SENP2Q9HC62 589 aa10.19□□□□□ -0.78
UBE3B-208ENST00000538070 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.19□□□□□ -0.78
UBE3B-208ENST00000538070 RAI14Q9P0K7 980 aa10.19□□□□□ -0.78
UBE3B-208ENST00000538070 UBE2Q2LH0YL09 131 aa10.19□□□□□ -0.78
UBE3B-208ENST00000538070 AP5Z1O43299 807 aa10.19□□□□□ -0.78
UBE3B-208ENST00000538070 RESTQ13127 1097 aa10.19□□□□□ -0.78
UBE3B-208ENST00000538070 NKX1-1Q15270 411 aaPredicted RBP10.19□□□□□ -0.78
UBE3B-208ENST00000538070 PDLIM2Q96JY6 352 aa10.19□□□□□ -0.78
UBE3B-208ENST00000538070 TRPM3Q9HCF6 1732 aaPredicted RBP10.19□□□□□ -0.78
UBE3B-208ENST00000538070 PDE8AO60658 829 aa10.19□□□□□ -0.78
UBE3B-208ENST00000538070 CRKLP46109 303 aaKnown RBP10.19□□□□□ -0.78
UBE3B-208ENST00000538070 FAM98CQ17RN3 349 aaKnown RBP10.19□□□□□ -0.78
UBE3B-208ENST00000538070 TMEM87AQ8NBN3 555 aa10.19□□□□□ -0.78
UBE3B-208ENST00000538070 CIAO1O76071 339 aa10.18□□□□□ -0.78
UBE3B-208ENST00000538070 PDE8BO95263 885 aa10.18□□□□□ -0.78
UBE3B-208ENST00000538070 CHAF1AQ13111 956 aaPredicted RBP10.18□□□□□ -0.78
UBE3B-208ENST00000538070 NKX2-3Q8TAU0 364 aa10.18□□□□□ -0.78
UBE3B-208ENST00000538070 IL17RAQ96F46 866 aa10.18□□□□□ -0.78
UBE3B-208ENST00000538070 CBX8Q9HC52 389 aa10.18□□□□□ -0.78
UBE3B-208ENST00000538070 RIPOR2Q9Y4F9 1068 aa10.18□□□□□ -0.78
UBE3B-208ENST00000538070 UQCRHLA0A096LP55 91 aa10.18□□□□□ -0.78
UBE3B-208ENST00000538070 hCG_1642624A0A1W2PR95 340 aa10.18□□□□□ -0.78
UBE3B-208ENST00000538070 UQCRHP07919 91 aa10.18□□□□□ -0.78
UBE3B-208ENST00000538070 PDE6AP16499 860 aa10.18□□□□□ -0.78
UBE3B-208ENST00000538070 PTGS1P23219 599 aa10.18□□□□□ -0.78
UBE3B-208ENST00000538070 IGHMBP2P38935 993 aaKnown RBP10.18□□□□□ -0.78
UBE3B-208ENST00000538070 HSP90AA2PQ14568 343 aaPredicted RBP10.18□□□□□ -0.78
UBE3B-208ENST00000538070 FILIP1Q7Z7B0 1213 aa10.18□□□□□ -0.78
UBE3B-208ENST00000538070 NRBP1Q9UHY1 535 aa10.18□□□□□ -0.78
UBE3B-208ENST00000538070 UBN2Q6ZU65 1347 aa10.18□□□□□ -0.78
UBE3B-208ENST00000538070 IFIT3O14879 490 aaKnown RBP10.18□□□□□ -0.78
UBE3B-208ENST00000538070 HMGN5P82970 282 aaKnown RBP10.18□□□□□ -0.78
UBE3B-208ENST00000538070 TMEM67Q5HYA8 995 aa10.18□□□□□ -0.78
UBE3B-208ENST00000538070 MRVI1Q9Y6F6 885 aa10.18□□□□□ -0.78
UBE3B-208ENST00000538070 ZNF142P52746 1687 aaPredicted RBP10.18□□□□□ -0.78
UBE3B-208ENST00000538070 PRDM1O75626 825 aa10.17□□□□□ -0.78
UBE3B-208ENST00000538070 SLC5A1P13866 664 aa10.17□□□□□ -0.78
UBE3B-208ENST00000538070 GYG1P46976 350 aa10.17□□□□□ -0.78
UBE3B-208ENST00000538070 METAP2P50579 478 aaKnown RBP eCLIP10.17□□□□□ -0.78
UBE3B-208ENST00000538070 HSP90AA4PQ58FG1 418 aa10.17□□□□□ -0.78
UBE3B-208ENST00000538070 TBC1D10CQ8IV04 446 aa10.17□□□□□ -0.78
UBE3B-208ENST00000538070 ZNF592Q92610 1267 aa10.17□□□□□ -0.78
UBE3B-208ENST00000538070 ZNF396Q96N95 335 aaPredicted RBP10.17□□□□□ -0.78
UBE3B-208ENST00000538070 C8orf37Q96NL8 207 aa10.17□□□□□ -0.78
UBE3B-208ENST00000538070 UTP14AQ9BVJ6 771 aaKnown RBP10.17□□□□□ -0.78
UBE3B-208ENST00000538070 GPR108Q9NPR9 543 aa10.17□□□□□ -0.78
UBE3B-208ENST00000538070 CLIC4Q9Y696 253 aa10.17□□□□□ -0.78
UBE3B-208ENST00000538070 TSGA10IPQ3SY00 556 aa10.17□□□□□ -0.78
UBE3B-208ENST00000538070 SPECC1Q5M775 1068 aa10.17□□□□□ -0.78
UBE3B-208ENST00000538070 CCDC186Q7Z3E2 898 aa10.17□□□□□ -0.78
UBE3B-208ENST00000538070 FAM200AQ8TCP9 573 aa10.17□□□□□ -0.78
UBE3B-208ENST00000538070 SLC26A6Q9BXS9 759 aa10.17□□□□□ -0.78
UBE3B-208ENST00000538070 GOLGB1Q14789 3259 aaKnown RBP10.17□□□□□ -0.78
UBE3B-208ENST00000538070 LOC102724428A0A0B4J2F2 783 aa10.17□□□□□ -0.78
UBE3B-208ENST00000538070 OFD1O75665 1012 aa10.17□□□□□ -0.78
UBE3B-208ENST00000538070 ZFYP08048 801 aaPredicted RBP10.17□□□□□ -0.78
UBE3B-208ENST00000538070 SIK1P57059 783 aa10.17□□□□□ -0.78
UBE3B-208ENST00000538070 EXOSC10Q01780 885 aaKnown RBP10.17□□□□□ -0.78
UBE3B-208ENST00000538070 LRMPQ12912 555 aa10.17□□□□□ -0.78
UBE3B-208ENST00000538070 SDR42E1Q8WUS8 393 aa10.17□□□□□ -0.78
UBE3B-208ENST00000538070 SLC4A4Q9Y6R1 1079 aa10.17□□□□□ -0.78
UBE3B-208ENST00000538070 KIF1AQ12756 1690 aa10.16□□□□□ -0.78
UBE3B-208ENST00000538070 MAP3K12Q12852 859 aa10.16□□□□□ -0.78
UBE3B-208ENST00000538070 RASGRF1Q13972 1273 aa10.16□□□□□ -0.78
UBE3B-208ENST00000538070 CYB5R4Q7L1T6 521 aa10.16□□□□□ -0.78
UBE3B-208ENST00000538070 SPATA5Q8NB90 893 aa10.16□□□□□ -0.78
UBE3B-208ENST00000538070 ALG1Q9BT22 464 aa10.16□□□□□ -0.78
UBE3B-208ENST00000538070 GOLPH3LQ9H4A5 285 aa10.16□□□□□ -0.78
UBE3B-208ENST00000538070 ZSCAN16Q9H4T2 348 aaPredicted RBP10.16□□□□□ -0.78
UBE3B-208ENST00000538070 DDX19AQ9NUU7 478 aaKnown RBP10.16□□□□□ -0.78
UBE3B-208ENST00000538070 CCDC87Q9NVE4 849 aa10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms