RNA–Protein interactions for RNA: ENST00000537606.5

SNX17-210, Transcript of sorting nexin 17, humanhuman

TSL 2 BASIC

Gene SNX17, Length 2,400 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-210ENST00000537606 RC3H1Q5TC82 1133 aaKnown RBP20.7■□□□□ 0.9
SNX17-210ENST00000537606 LARP1BQ659C4 914 aaKnown RBP20.7■□□□□ 0.9
SNX17-210ENST00000537606 ARHGEF1Q92888 912 aaKnown RBP20.7■□□□□ 0.9
SNX17-210ENST00000537606 SETDB2Q96T68 719 aa20.7■□□□□ 0.9
SNX17-210ENST00000537606 CNPY2Q9Y2B0 182 aa20.7■□□□□ 0.9
SNX17-210ENST00000537606 TCHHQ07283 1943 aa20.7■□□□□ 0.9
SNX17-210ENST00000537606 JAK2O60674 1132 aa20.69■□□□□ 0.9
SNX17-210ENST00000537606 ZNF445P59923 1031 aa20.69■□□□□ 0.9
SNX17-210ENST00000537606 APOBRQ0VD83 1088 aa20.69■□□□□ 0.9
SNX17-210ENST00000537606 USP48Q86UV5 1035 aa20.69■□□□□ 0.9
SNX17-210ENST00000537606 CDC5LQ99459 802 aaKnown RBP20.69■□□□□ 0.9
SNX17-210ENST00000537606 THSD7AQ9UPZ6 1657 aa20.69■□□□□ 0.9
SNX17-210ENST00000537606 PDE6AP16499 860 aa20.69■□□□□ 0.9
SNX17-210ENST00000537606 ANKRD18AQ8IVF6 992 aa20.69■□□□□ 0.9
SNX17-210ENST00000537606 NAP1L2Q9ULW6 460 aaPredicted RBP20.69■□□□□ 0.9
SNX17-210ENST00000537606 BCORQ6W2J9 1755 aa20.69■□□□□ 0.9
SNX17-210ENST00000537606 ZSCAN25Q6NSZ9 544 aa20.68■□□□□ 0.9
SNX17-210ENST00000537606 CELF1Q92879 486 aaKnown RBP20.68■□□□□ 0.9
SNX17-210ENST00000537606 HMGB1P09429 215 aaKnown RBP20.68■□□□□ 0.9
SNX17-210ENST00000537606 EXOSC10Q01780 885 aaKnown RBP20.68■□□□□ 0.9
SNX17-210ENST00000537606 IMMTQ16891 758 aaKnown RBP20.68■□□□□ 0.9
SNX17-210ENST00000537606 NBPF5PQ86XG9 351 aaPredicted RBP20.68■□□□□ 0.9
SNX17-210ENST00000537606 GTF3C6Q969F1 213 aa20.68■□□□□ 0.9
SNX17-210ENST00000537606 GPHNQ9NQX3 736 aaPredicted RBP20.68■□□□□ 0.9
SNX17-210ENST00000537606 RTL9Q8NET4 1388 aa20.68■□□□□ 0.9
SNX17-210ENST00000537606 SYCE3A1L190 88 aa20.67■□□□□ 0.9
SNX17-210ENST00000537606 APPP05067 770 aa20.67■□□□□ 0.9
SNX17-210ENST00000537606 SF3B3Q15393 1217 aaKnown RBP20.67■□□□□ 0.9
SNX17-210ENST00000537606 FERMT3Q86UX7 667 aa20.67■□□□□ 0.9
SNX17-210ENST00000537606 CTNNA3Q9UI47 895 aa20.67■□□□□ 0.9
SNX17-210ENST00000537606 LAMA4Q16363 1823 aa20.67■□□□□ 0.9
SNX17-210ENST00000537606 PPFIA3O75145 1194 aa20.67■□□□□ 0.9
SNX17-210ENST00000537606 SCRN1Q12765 414 aa20.67■□□□□ 0.9
SNX17-210ENST00000537606 MAGEB6Q8N7X4 407 aa20.67■□□□□ 0.9
SNX17-210ENST00000537606 DDX11Q96FC9 970 aa20.67■□□□□ 0.9
SNX17-210ENST00000537606 CCT2P78371 535 aaKnown RBP20.66■□□□□ 0.9
SNX17-210ENST00000537606 CDC37L1Q7L3B6 337 aa20.66■□□□□ 0.9
SNX17-210ENST00000537606 RRAGDQ9NQL2 400 aaPredicted RBP20.66■□□□□ 0.9
SNX17-210ENST00000537606 MYH7P12883 1935 aa20.66■□□□□ 0.9
SNX17-210ENST00000537606 ZNF831Q5JPB2 1677 aa20.66■□□□□ 0.9
SNX17-210ENST00000537606 TCRBV5S4A2TA0A5A2 114 aa20.66■□□□□ 0.9
SNX17-210ENST00000537606 GYG1P46976 350 aa20.66■□□□□ 0.9
SNX17-210ENST00000537606 NASPP49321 788 aaPredicted RBP20.66■□□□□ 0.9
SNX17-210ENST00000537606 UBE3CQ15386 1083 aa20.66■□□□□ 0.9
SNX17-210ENST00000537606 TRPC5Q9UL62 973 aaPredicted RBP20.66■□□□□ 0.9
SNX17-210ENST00000537606 DNM1Q05193 864 aaKnown RBP20.65■□□□□ 0.9
SNX17-210ENST00000537606 FAM196AQ6ZSG2 479 aa20.65■□□□□ 0.9
SNX17-210ENST00000537606 RBSNQ9H1K0 784 aa20.65■□□□□ 0.9
SNX17-210ENST00000537606 LRRC4BQ9NT99 713 aa20.65■□□□□ 0.9
SNX17-210ENST00000537606 DENND2AQ9ULE3 1009 aa20.65■□□□□ 0.9
SNX17-210ENST00000537606 ZNF213O14771 459 aa20.65■□□□□ 0.9
SNX17-210ENST00000537606 FIBPO43427 364 aa20.65■□□□□ 0.9
SNX17-210ENST00000537606 FAM173BQ6P4H8 233 aa20.65■□□□□ 0.9
SNX17-210ENST00000537606 QTRT2Q9H974 415 aaKnown RBP20.65■□□□□ 0.9
SNX17-210ENST00000537606 NHSQ6T4R5 1651 aa20.64■□□□□ 0.9
SNX17-210ENST00000537606 FAM43AQ8N2R8 423 aa20.64■□□□□ 0.89
SNX17-210ENST00000537606 MINPP1Q9UNW1 487 aa20.64■□□□□ 0.89
SNX17-210ENST00000537606 MBD3O95983 291 aa20.64■□□□□ 0.89
SNX17-210ENST00000537606 RFC4P35249 363 aa20.64■□□□□ 0.89
SNX17-210ENST00000537606 SLC10A5Q5PT55 438 aa20.64■□□□□ 0.89
SNX17-210ENST00000537606 AIDAQ96BJ3 306 aa20.64■□□□□ 0.89
SNX17-210ENST00000537606 NLRP3Q96P20 1036 aa20.64■□□□□ 0.89
SNX17-210ENST00000537606 NCOA5Q9HCD5 579 aaKnown RBP20.64■□□□□ 0.89
SNX17-210ENST00000537606 BSDC1Q9NW68 430 aaPredicted RBP20.64■□□□□ 0.89
SNX17-210ENST00000537606 NPHP1O15259 732 aa20.63■□□□□ 0.89
SNX17-210ENST00000537606 ONECUT3O60422 494 aaPredicted RBP20.63■□□□□ 0.89
SNX17-210ENST00000537606 MAP3K12Q12852 859 aa20.63■□□□□ 0.89
SNX17-210ENST00000537606 NKX2-3Q8TAU0 364 aa20.63■□□□□ 0.89
SNX17-210ENST00000537606 NYXQ9GZU5 481 aa20.63■□□□□ 0.89
SNX17-210ENST00000537606 LAMB2P55268 1798 aa20.62■□□□□ 0.89
SNX17-210ENST00000537606 TRAPPC3LQ5T215 181 aa20.62■□□□□ 0.89
SNX17-210ENST00000537606 TPTE2Q6XPS3 522 aa20.62■□□□□ 0.89
SNX17-210ENST00000537606 STRBPQ96SI9 672 aaKnown RBP20.62■□□□□ 0.89
SNX17-210ENST00000537606 ARMT1Q9H993 441 aa20.62■□□□□ 0.89
SNX17-210ENST00000537606 PFKFB2O60825 505 aa20.62■□□□□ 0.89
SNX17-210ENST00000537606 FOSBP53539 338 aa20.62■□□□□ 0.89
SNX17-210ENST00000537606 AGXT2Q9BYV1 514 aa20.62■□□□□ 0.89
SNX17-210ENST00000537606 NBPF3Q9H094 633 aa20.62■□□□□ 0.89
SNX17-210ENST00000537606 ABCF2Q9UG63 623 aa20.62■□□□□ 0.89
SNX17-210ENST00000537606 ATP6V1DQ9Y5K8 247 aa20.62■□□□□ 0.89
SNX17-210ENST00000537606 MBD4O95243 580 aa20.61■□□□□ 0.89
SNX17-210ENST00000537606 AEBP2Q6ZN18 517 aaPredicted RBP20.61■□□□□ 0.89
SNX17-210ENST00000537606 LRP2BPQ9P2M1 347 aa20.61■□□□□ 0.89
SNX17-210ENST00000537606 PDCP20941 246 aa20.61■□□□□ 0.89
SNX17-210ENST00000537606 RAB11FIP4Q86YS3 637 aa20.61■□□□□ 0.89
SNX17-210ENST00000537606 INCENPQ9NQS7 918 aa20.61■□□□□ 0.89
SNX17-210ENST00000537606 ARAP2Q8WZ64 1704 aa20.6■□□□□ 0.89
SNX17-210ENST00000537606 SCN7AQ01118 1682 aa20.6■□□□□ 0.89
SNX17-210ENST00000537606 ATRNO75882 1429 aa20.6■□□□□ 0.89
SNX17-210ENST00000537606 PRC1O43663 620 aa20.6■□□□□ 0.89
SNX17-210ENST00000537606 CTDNEP1O95476 244 aa20.6■□□□□ 0.89
SNX17-210ENST00000537606 KLRK1P26718 216 aa20.6■□□□□ 0.89
SNX17-210ENST00000537606 PDIA3P30101 505 aaKnown RBP20.6■□□□□ 0.89
SNX17-210ENST00000537606 RPS8P62241 208 aaKnown RBP20.6■□□□□ 0.89
SNX17-210ENST00000537606 SLC51AQ86UW1 340 aa20.6■□□□□ 0.89
SNX17-210ENST00000537606 TBC1D10CQ8IV04 446 aa20.6■□□□□ 0.89
SNX17-210ENST00000537606 MIGA1Q8NAN2 632 aa20.6■□□□□ 0.89
SNX17-210ENST00000537606 PRKAB2O43741 272 aa20.59■□□□□ 0.89
SNX17-210ENST00000537606 LRSAM1Q6UWE0 723 aa20.59■□□□□ 0.89
SNX17-210ENST00000537606 RALYLQ86SE5 291 aaKnown RBP20.59■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms