RNA–Protein interactions for RNA: ENST00000536871.6

SMG6-203, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 2 BASIC

Gene SMG6, Length 1,865 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-203ENST00000536871 RPS6KA4O75676 772 aa16■□□□□ 0.15
SMG6-203ENST00000536871 FGAP02671 866 aa16■□□□□ 0.15
SMG6-203ENST00000536871 CHGBP05060 677 aa16■□□□□ 0.15
SMG6-203ENST00000536871 TMED8Q6PL24 325 aaPredicted RBP16■□□□□ 0.15
SMG6-203ENST00000536871 GNL3LQ9NVN8 582 aaKnown RBP16■□□□□ 0.15
SMG6-203ENST00000536871 CNPY2Q9Y2B0 182 aa16■□□□□ 0.15
SMG6-203ENST00000536871 KCNQ2O43526 872 aa15.99■□□□□ 0.15
SMG6-203ENST00000536871 IGSF3O75054 1194 aa15.99■□□□□ 0.15
SMG6-203ENST00000536871 PHKA1P46020 1223 aa15.99■□□□□ 0.15
SMG6-203ENST00000536871 ANKRD18AQ8IVF6 992 aa15.99■□□□□ 0.15
SMG6-203ENST00000536871 LINC00116Q8NCU8 138 aa15.99■□□□□ 0.15
SMG6-203ENST00000536871 PUS7LQ9H0K6 701 aaKnown RBP15.99■□□□□ 0.15
SMG6-203ENST00000536871 NARFQ9UHQ1 456 aa15.99■□□□□ 0.15
SMG6-203ENST00000536871 USP21Q9UK80 565 aa15.99■□□□□ 0.15
SMG6-203ENST00000536871 CARMIL3Q8ND23 1372 aa15.99■□□□□ 0.15
SMG6-203ENST00000536871 H3BQV1 296 aa15.99■□□□□ 0.15
SMG6-203ENST00000536871 IDH1O75874 414 aaKnown RBP15.99■□□□□ 0.15
SMG6-203ENST00000536871 PDE6AP16499 860 aa15.99■□□□□ 0.15
SMG6-203ENST00000536871 STK3Q13188 491 aa15.99■□□□□ 0.15
SMG6-203ENST00000536871 UBE4AQ14139 1066 aa15.99■□□□□ 0.15
SMG6-203ENST00000536871 IFFO2Q5TF58 517 aa15.99■□□□□ 0.15
SMG6-203ENST00000536871 ZBTB22O15209 634 aa15.98■□□□□ 0.15
SMG6-203ENST00000536871 SCRN1Q12765 414 aa15.98■□□□□ 0.15
SMG6-203ENST00000536871 AIDAQ96BJ3 306 aa15.98■□□□□ 0.15
SMG6-203ENST00000536871 TRIM44Q96DX7 344 aaPredicted RBP15.98■□□□□ 0.15
SMG6-203ENST00000536871 PPP1R9BQ96SB3 815 aa15.98■□□□□ 0.15
SMG6-203ENST00000536871 BSDC1Q9NW68 430 aaPredicted RBP15.98■□□□□ 0.15
SMG6-203ENST00000536871 CFAP45Q9UL16 551 aa15.98■□□□□ 0.15
SMG6-203ENST00000536871 DDX60Q8IY21 1712 aaKnown RBP15.98■□□□□ 0.15
SMG6-203ENST00000536871 THSD7AQ9UPZ6 1657 aa15.97■□□□□ 0.15
SMG6-203ENST00000536871 FIBPO43427 364 aa15.97■□□□□ 0.15
SMG6-203ENST00000536871 DNM1Q05193 864 aaKnown RBP15.97■□□□□ 0.15
SMG6-203ENST00000536871 PANK2Q9BZ23 570 aa15.97■□□□□ 0.15
SMG6-203ENST00000536871 TSPY26PQ9H489 355 aa15.97■□□□□ 0.15
SMG6-203ENST00000536871 PIH1D3Q9NQM4 214 aaKnown RBP15.97■□□□□ 0.15
SMG6-203ENST00000536871 ZNF532Q9HCE3 1301 aa15.97■□□□□ 0.15
SMG6-203ENST00000536871 MYH7P12883 1935 aa15.97■□□□□ 0.15
SMG6-203ENST00000536871 SYCE3A1L190 88 aa15.97■□□□□ 0.15
SMG6-203ENST00000536871 RRP9O43818 475 aaKnown RBP15.97■□□□□ 0.15
SMG6-203ENST00000536871 GTF2E1P29083 439 aaPredicted RBP15.97■□□□□ 0.15
SMG6-203ENST00000536871 CHRNDQ07001 517 aa15.97■□□□□ 0.15
SMG6-203ENST00000536871 CDC37L1Q7L3B6 337 aa15.97■□□□□ 0.15
SMG6-203ENST00000536871 MB21D2Q8IYB1 491 aaPredicted RBP15.97■□□□□ 0.15
SMG6-203ENST00000536871 NSUN7Q8NE18 718 aaKnown RBP15.97■□□□□ 0.15
SMG6-203ENST00000536871 SEC31BQ9NQW1 1179 aa15.97■□□□□ 0.15
SMG6-203ENST00000536871 RBM27Q9P2N5 1060 aaKnown RBP15.97■□□□□ 0.15
SMG6-203ENST00000536871 AKAP11Q9UKA4 1901 aa15.97■□□□□ 0.15
SMG6-203ENST00000536871 SCN7AQ01118 1682 aa15.96■□□□□ 0.15
SMG6-203ENST00000536871 NHSQ6T4R5 1651 aa15.96■□□□□ 0.15
SMG6-203ENST00000536871 MYH14Q7Z406 1995 aaKnown RBP15.96■□□□□ 0.15
SMG6-203ENST00000536871 TCRBV5S4A2TA0A5A2 114 aa15.96■□□□□ 0.15
SMG6-203ENST00000536871 PATL2C9JE40 543 aaKnown RBP15.96■□□□□ 0.15
SMG6-203ENST00000536871 SEMA3EO15041 775 aa15.96■□□□□ 0.15
SMG6-203ENST00000536871 FOXP2O15409 715 aa15.96■□□□□ 0.15
SMG6-203ENST00000536871 PDIA3P30101 505 aaKnown RBP15.96■□□□□ 0.15
SMG6-203ENST00000536871 SLFNL1Q499Z3 407 aa15.96■□□□□ 0.15
SMG6-203ENST00000536871 PI16Q6UXB8 463 aa15.96■□□□□ 0.15
SMG6-203ENST00000536871 MTA3Q9BTC8 594 aa15.96■□□□□ 0.15
SMG6-203ENST00000536871 NACAP1Q9BZK3 213 aa15.96■□□□□ 0.15
SMG6-203ENST00000536871 FAM177BA6PVY3 158 aa15.95■□□□□ 0.14
SMG6-203ENST00000536871 PRC1O43663 620 aa15.95■□□□□ 0.14
SMG6-203ENST00000536871 GADD45BO75293 160 aaPredicted RBP15.95■□□□□ 0.14
SMG6-203ENST00000536871 ZPR1O75312 459 aa15.95■□□□□ 0.14
SMG6-203ENST00000536871 APOBRQ0VD83 1088 aa15.95■□□□□ 0.14
SMG6-203ENST00000536871 RASGRF1Q13972 1273 aa15.95■□□□□ 0.14
SMG6-203ENST00000536871 UVSSAQ2YD98 709 aa15.95■□□□□ 0.14
SMG6-203ENST00000536871 FOXD4L6Q3SYB3 417 aaPredicted RBP15.95■□□□□ 0.14
SMG6-203ENST00000536871 HS1BP3Q53T59 392 aa15.95■□□□□ 0.14
SMG6-203ENST00000536871 FOXD4L3Q6VB84 417 aaPredicted RBP15.95■□□□□ 0.14
SMG6-203ENST00000536871 PNPLA7Q6ZV29 1317 aa15.95■□□□□ 0.14
SMG6-203ENST00000536871 TMEM87BQ96K49 555 aa15.95■□□□□ 0.14
SMG6-203ENST00000536871 STRBPQ96SI9 672 aaKnown RBP15.95■□□□□ 0.14
SMG6-203ENST00000536871 SETDB2Q96T68 719 aa15.95■□□□□ 0.14
SMG6-203ENST00000536871 CNNM2Q9H8M5 875 aa15.95■□□□□ 0.14
SMG6-203ENST00000536871 GDPD2Q9HCC8 539 aa15.95■□□□□ 0.14
SMG6-203ENST00000536871 NSFL1CQ9UNZ2 370 aaKnown RBP15.95■□□□□ 0.14
SMG6-203ENST00000536871 RTCBQ9Y3I0 505 aaKnown RBP15.95■□□□□ 0.14
SMG6-203ENST00000536871 ZNF804BA4D1E1 1349 aa15.95■□□□□ 0.14
SMG6-203ENST00000536871 PTPDC1A2A3K4 754 aa15.95■□□□□ 0.14
SMG6-203ENST00000536871 GOLGA6L4A6NEF3 574 aa15.95■□□□□ 0.14
SMG6-203ENST00000536871 COL9A3Q14050 684 aaPredicted RBP15.95■□□□□ 0.14
SMG6-203ENST00000536871 CAVIN4Q5BKX8 364 aa15.95■□□□□ 0.14
SMG6-203ENST00000536871 TTLL5Q6EMB2 1281 aa15.95■□□□□ 0.14
SMG6-203ENST00000536871 HELBQ8NG08 1087 aaPredicted RBP15.95■□□□□ 0.14
SMG6-203ENST00000536871 CHAMP1Q96JM3 812 aa15.95■□□□□ 0.14
SMG6-203ENST00000536871 PDS5AQ29RF7 1337 aaKnown RBP15.94■□□□□ 0.14
SMG6-203ENST00000536871 SALL1Q9NSC2 1324 aa15.94■□□□□ 0.14
SMG6-203ENST00000536871 TPTE2Q6XPS3 522 aa15.94■□□□□ 0.14
SMG6-203ENST00000536871 NLRP3Q96P20 1036 aa15.94■□□□□ 0.14
SMG6-203ENST00000536871 ANKRD2Q9GZV1 360 aa15.94■□□□□ 0.14
SMG6-203ENST00000536871 CDKL5O76039 1030 aa15.93■□□□□ 0.14
SMG6-203ENST00000536871 APPP05067 770 aa15.93■□□□□ 0.14
SMG6-203ENST00000536871 RESTQ13127 1097 aa15.93■□□□□ 0.14
SMG6-203ENST00000536871 ERFEQ4G0M1 354 aa15.93■□□□□ 0.14
SMG6-203ENST00000536871 CPLX2Q6PUV4 134 aaKnown RBP15.93■□□□□ 0.14
SMG6-203ENST00000536871 SPATA32Q96LK8 384 aa15.93■□□□□ 0.14
SMG6-203ENST00000536871 ZNF396Q96N95 335 aaPredicted RBP15.93■□□□□ 0.14
SMG6-203ENST00000536871 CCNL1Q9UK58 526 aaPredicted RBP15.93■□□□□ 0.14
SMG6-203ENST00000536871 DENND2AQ9ULE3 1009 aa15.93■□□□□ 0.14
SMG6-203ENST00000536871 JAK2O60674 1132 aa15.93■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms