RNA–Protein interactions for RNA: ENST00000535659.6

CNN1-202, Transcript of calponin 1, humanhuman

TSL 2 BASIC

Gene CNN1, Length 1,527 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN1-202ENST00000535659 RASGRF1Q13972 1273 aa19.01■□□□□ 0.63
CNN1-202ENST00000535659 SCARF1Q14162 830 aa19.01■□□□□ 0.63
CNN1-202ENST00000535659 TSHZ3Q63HK5 1081 aa19.01■□□□□ 0.63
CNN1-202ENST00000535659 TTLL5Q6EMB2 1281 aa19.01■□□□□ 0.63
CNN1-202ENST00000535659 SPATA5Q8NB90 893 aa19.01■□□□□ 0.63
CNN1-202ENST00000535659 BOLA2Q9H3K6 86 aa19.01■□□□□ 0.63
CNN1-202ENST00000535659 HMG20BQ9P0W2 317 aa19.01■□□□□ 0.63
CNN1-202ENST00000535659 GLRX3O76003 335 aaKnown RBP19■□□□□ 0.63
CNN1-202ENST00000535659 GTF2IP78347 998 aa19■□□□□ 0.63
CNN1-202ENST00000535659 SKAP1Q86WV1 359 aa19■□□□□ 0.63
CNN1-202ENST00000535659 PI4K2BQ8TCG2 481 aa19■□□□□ 0.63
CNN1-202ENST00000535659 USP17L3A6NCW0 530 aa19■□□□□ 0.63
CNN1-202ENST00000535659 USP17L4A6NCW7 530 aa19■□□□□ 0.63
CNN1-202ENST00000535659 EIF6P56537 245 aaKnown RBP19■□□□□ 0.63
CNN1-202ENST00000535659 CXCL9Q07325 125 aa19■□□□□ 0.63
CNN1-202ENST00000535659 CHAF1AQ13111 956 aaPredicted RBP19■□□□□ 0.63
CNN1-202ENST00000535659 STRIP1Q5VSL9 837 aa19■□□□□ 0.63
CNN1-202ENST00000535659 USP17L1Q7RTZ2 530 aa19■□□□□ 0.63
CNN1-202ENST00000535659 SNRKQ9NRH2 765 aa19■□□□□ 0.63
CNN1-202ENST00000535659 FAM205AQ6ZU69 1335 aa18.99■□□□□ 0.63
CNN1-202ENST00000535659 RAD17O75943 681 aa18.99■□□□□ 0.63
CNN1-202ENST00000535659 PI16Q6UXB8 463 aa18.99■□□□□ 0.63
CNN1-202ENST00000535659 WDR66Q8TBY9 1149 aa18.99■□□□□ 0.63
CNN1-202ENST00000535659 HAUS7Q99871 368 aa18.99■□□□□ 0.63
CNN1-202ENST00000535659 AOX1Q06278 1338 aa18.99■□□□□ 0.63
CNN1-202ENST00000535659 PDS5AQ29RF7 1337 aaKnown RBP18.99■□□□□ 0.63
CNN1-202ENST00000535659 SBF1O95248 1867 aa18.98■□□□□ 0.63
CNN1-202ENST00000535659 ZAP70P43403 619 aa18.98■□□□□ 0.63
CNN1-202ENST00000535659 TNIP1Q15025 636 aa18.98■□□□□ 0.63
CNN1-202ENST00000535659 CIAPIN1Q6FI81 312 aa18.98■□□□□ 0.63
CNN1-202ENST00000535659 FBXW7Q969H0 707 aa18.98■□□□□ 0.63
CNN1-202ENST00000535659 JAG2Q9Y219 1238 aa18.98■□□□□ 0.63
CNN1-202ENST00000535659 CCDC88AQ3V6T2 1871 aa18.97■□□□□ 0.63
CNN1-202ENST00000535659 VIL1P09327 827 aaKnown RBP18.97■□□□□ 0.63
CNN1-202ENST00000535659 RGS3P49796 1198 aa18.97■□□□□ 0.63
CNN1-202ENST00000535659 DACT2Q5SW24 774 aa18.97■□□□□ 0.63
CNN1-202ENST00000535659 PSMD14O00487 310 aa18.96■□□□□ 0.63
CNN1-202ENST00000535659 CYP2E1P05181 493 aaPredicted RBP18.96■□□□□ 0.63
CNN1-202ENST00000535659 TBC1D22AQ8WUA7 517 aa18.96■□□□□ 0.63
CNN1-202ENST00000535659 DNAJC2Q99543 621 aaKnown RBP18.96■□□□□ 0.63
CNN1-202ENST00000535659 NDUFB9Q9Y6M9 179 aa18.96■□□□□ 0.63
CNN1-202ENST00000535659 COL1A1P02452 1464 aaPredicted RBP18.96■□□□□ 0.63
CNN1-202ENST00000535659 FKBP1AP62942 108 aaKnown RBP18.95■□□□□ 0.62
CNN1-202ENST00000535659 SALL1Q9NSC2 1324 aa18.95■□□□□ 0.62
CNN1-202ENST00000535659 ZC3H4Q9UPT8 1303 aaKnown RBP18.95■□□□□ 0.62
CNN1-202ENST00000535659 MFSD14BQ5SR56 506 aa18.95■□□□□ 0.62
CNN1-202ENST00000535659 TBC1D9Q6ZT07 1266 aa18.95■□□□□ 0.62
CNN1-202ENST00000535659 ZGPATQ8N5A5 531 aaKnown RBP18.95■□□□□ 0.62
CNN1-202ENST00000535659 MXD3Q9BW11 206 aa18.95■□□□□ 0.62
CNN1-202ENST00000535659 ANTXR1Q9H6X2 564 aa18.95■□□□□ 0.62
CNN1-202ENST00000535659 PAG1Q9NWQ8 432 aa18.95■□□□□ 0.62
CNN1-202ENST00000535659 DICER1Q9UPY3 1922 aaKnown RBP18.94■□□□□ 0.62
CNN1-202ENST00000535659 GOLIM4O00461 696 aa18.94■□□□□ 0.62
CNN1-202ENST00000535659 MAP4K4O95819 1239 aaPredicted RBP18.94■□□□□ 0.62
CNN1-202ENST00000535659 TTF1Q15361 905 aaPredicted RBP18.94■□□□□ 0.62
CNN1-202ENST00000535659 TTC22Q5TAA0 569 aa18.94■□□□□ 0.62
CNN1-202ENST00000535659 DPY19L2Q6NUT2 758 aa18.94■□□□□ 0.62
CNN1-202ENST00000535659 RSBN1LQ6PCB5 846 aaPredicted RBP18.94■□□□□ 0.62
CNN1-202ENST00000535659 ABCF2Q9UG63 623 aa18.94■□□□□ 0.62
CNN1-202ENST00000535659 GJA3Q9Y6H8 435 aa18.94■□□□□ 0.62
CNN1-202ENST00000535659 TIAM2Q8IVF5 1701 aa18.93■□□□□ 0.62
CNN1-202ENST00000535659 ZNF541Q9H0D2 1346 aa18.93■□□□□ 0.62
CNN1-202ENST00000535659 SPTY2D1Q68D10 685 aaPredicted RBP18.93■□□□□ 0.62
CNN1-202ENST00000535659 GPC2Q8N158 579 aa18.93■□□□□ 0.62
CNN1-202ENST00000535659 CERS5Q8N5B7 392 aa18.93■□□□□ 0.62
CNN1-202ENST00000535659 EDC3Q96F86 508 aaKnown RBP18.93■□□□□ 0.62
CNN1-202ENST00000535659 AGBL3Q8NEM8 1001 aa18.92■□□□□ 0.62
CNN1-202ENST00000535659 PIH1D3Q9NQM4 214 aaKnown RBP18.92■□□□□ 0.62
CNN1-202ENST00000535659 LRP2BPQ9P2M1 347 aa18.92■□□□□ 0.62
CNN1-202ENST00000535659 SUGT1Q9Y2Z0 365 aa18.92■□□□□ 0.62
CNN1-202ENST00000535659 ZBTB12Q9Y330 459 aaPredicted RBP18.92■□□□□ 0.62
CNN1-202ENST00000535659 SCN9AQ15858 1988 aa18.92■□□□□ 0.62
CNN1-202ENST00000535659 AKAP11Q9UKA4 1901 aa18.92■□□□□ 0.62
CNN1-202ENST00000535659 MYH13Q9UKX3 1938 aa18.92■□□□□ 0.62
CNN1-202ENST00000535659 MYO3BQ8WXR4 1341 aa18.91■□□□□ 0.62
CNN1-202ENST00000535659 ERICH6Q7L0X2 663 aa18.91■□□□□ 0.62
CNN1-202ENST00000535659 EVI5LQ96CN4 794 aa18.91■□□□□ 0.62
CNN1-202ENST00000535659 GMLQ99445 158 aa18.91■□□□□ 0.62
CNN1-202ENST00000535659 TRIM6-TRIM34B2RNG4 842 aa18.9■□□□□ 0.62
CNN1-202ENST00000535659 IGSF3O75054 1194 aa18.9■□□□□ 0.62
CNN1-202ENST00000535659 DDNO94850 711 aaPredicted RBP18.9■□□□□ 0.62
CNN1-202ENST00000535659 LDHBP07195 334 aaKnown RBP18.9■□□□□ 0.62
CNN1-202ENST00000535659 RPS12P25398 132 aaKnown RBP18.9■□□□□ 0.62
CNN1-202ENST00000535659 GRIK5Q16478 980 aa18.9■□□□□ 0.62
CNN1-202ENST00000535659 GLTPD2A6NH11 291 aa18.9■□□□□ 0.62
CNN1-202ENST00000535659 GSPT1P15170 499 aaKnown RBP18.9■□□□□ 0.62
CNN1-202ENST00000535659 PRDX5P30044 214 aa18.9■□□□□ 0.62
CNN1-202ENST00000535659 CNTROBQ8N137 903 aa18.9■□□□□ 0.62
CNN1-202ENST00000535659 KBTBD3Q8NAB2 608 aa18.9■□□□□ 0.62
CNN1-202ENST00000535659 DPF2Q92785 391 aa18.9■□□□□ 0.62
CNN1-202ENST00000535659 RILPL2Q969X0 211 aa18.9■□□□□ 0.62
CNN1-202ENST00000535659 RAI14Q9P0K7 980 aa18.9■□□□□ 0.62
CNN1-202ENST00000535659 ZNF646O15015 1829 aaPredicted RBP18.89■□□□□ 0.61
CNN1-202ENST00000535659 IDH1O75874 414 aaKnown RBP18.89■□□□□ 0.61
CNN1-202ENST00000535659 GMPSP49915 693 aaPredicted RBP18.89■□□□□ 0.61
CNN1-202ENST00000535659 MAP3K12Q12852 859 aa18.89■□□□□ 0.61
CNN1-202ENST00000535659 KIAA0825Q8IV33 1275 aa18.89■□□□□ 0.61
CNN1-202ENST00000535659 PSME4Q14997 1843 aa18.88■□□□□ 0.61
CNN1-202ENST00000535659 F8W031 263 aaPredicted RBP18.88■□□□□ 0.61
CNN1-202ENST00000535659 USP17L8P0C7I0 530 aa18.88■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms