RNA–Protein interactions for RNA: ENST00000535493.5

HDAC4-214, Transcript of histone deacetylase 4, humanhuman

TSL 2

Gene HDAC4, Length 2,743 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-214ENST00000535493 C8orf76Q96K31 380 aa15.57■□□□□ 0.08
HDAC4-214ENST00000535493 OSBPL5Q9H0X9 879 aaPredicted RBP15.57■□□□□ 0.08
HDAC4-214ENST00000535493 ZCCHC17Q9NP64 241 aaKnown RBP15.57■□□□□ 0.08
HDAC4-214ENST00000535493 MAST3O60307 1309 aa15.56■□□□□ 0.08
HDAC4-214ENST00000535493 SALL1Q9NSC2 1324 aa15.56■□□□□ 0.08
HDAC4-214ENST00000535493 MED1Q15648 1581 aaPredicted RBP15.56■□□□□ 0.08
HDAC4-214ENST00000535493 TMEM232C9JQI7 657 aa15.56■□□□□ 0.08
HDAC4-214ENST00000535493 SPTLC2O15270 562 aa15.56■□□□□ 0.08
HDAC4-214ENST00000535493 WDHD1O75717 1129 aaPredicted RBP15.56■□□□□ 0.08
HDAC4-214ENST00000535493 URI1O94763 535 aaPredicted RBP15.56■□□□□ 0.08
HDAC4-214ENST00000535493 GSDMDP57764 484 aa15.56■□□□□ 0.08
HDAC4-214ENST00000535493 NCAPHQ15003 741 aa15.56■□□□□ 0.08
HDAC4-214ENST00000535493 BBXQ8WY36 941 aaPredicted RBP15.56■□□□□ 0.08
HDAC4-214ENST00000535493 OSBP2Q969R2 916 aa15.56■□□□□ 0.08
HDAC4-214ENST00000535493 FHOD1Q9Y613 1164 aa15.56■□□□□ 0.08
HDAC4-214ENST00000535493 KDM3BQ7LBC6 1761 aa15.56■□□□□ 0.08
HDAC4-214ENST00000535493 MARF1Q9Y4F3 1742 aaKnown RBP15.56■□□□□ 0.08
HDAC4-214ENST00000535493 FANCCQ00597 558 aa15.56■□□□□ 0.08
HDAC4-214ENST00000535493 WASHC4Q2M389 1173 aa15.56■□□□□ 0.08
HDAC4-214ENST00000535493 NKX2-3Q8TAU0 364 aa15.56■□□□□ 0.08
HDAC4-214ENST00000535493 PUS3Q9BZE2 481 aaKnown RBP15.56■□□□□ 0.08
HDAC4-214ENST00000535493 ORC3Q9UBD5 711 aaPredicted RBP15.56■□□□□ 0.08
HDAC4-214ENST00000535493 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP15.56■□□□□ 0.08
HDAC4-214ENST00000535493 KLF18A0A0U1RQI7 1052 aa15.55■□□□□ 0.08
HDAC4-214ENST00000535493 SPECC1Q5M775 1068 aa15.55■□□□□ 0.08
HDAC4-214ENST00000535493 NLRP2Q9NX02 1062 aa15.55■□□□□ 0.08
HDAC4-214ENST00000535493 RTEL1Q9NZ71 1219 aa15.55■□□□□ 0.08
HDAC4-214ENST00000535493 LTN1O94822 1766 aa15.55■□□□□ 0.08
HDAC4-214ENST00000535493 UBE2Q2LH0YL09 131 aa15.55■□□□□ 0.08
HDAC4-214ENST00000535493 HMGB1P09429 215 aaKnown RBP15.55■□□□□ 0.08
HDAC4-214ENST00000535493 PFKFB1P16118 471 aa15.55■□□□□ 0.08
HDAC4-214ENST00000535493 PNOCQ13519 176 aa15.55■□□□□ 0.08
HDAC4-214ENST00000535493 PI16Q6UXB8 463 aa15.55■□□□□ 0.08
HDAC4-214ENST00000535493 ARHGEF25Q86VW2 580 aa15.55■□□□□ 0.08
HDAC4-214ENST00000535493 CLIC6Q96NY7 704 aa15.55■□□□□ 0.08
HDAC4-214ENST00000535493 MROH7-TTC4A0A0A0MT08 1334 aa15.55■□□□□ 0.08
HDAC4-214ENST00000535493 GOLGA8BA8MQT2 603 aa15.54■□□□□ 0.08
HDAC4-214ENST00000535493 SERPINC1P01008 464 aa15.54■□□□□ 0.08
HDAC4-214ENST00000535493 CFAP100Q494V2 611 aa15.54■□□□□ 0.08
HDAC4-214ENST00000535493 NOL10Q9BSC4 688 aaKnown RBP15.54■□□□□ 0.08
HDAC4-214ENST00000535493 CARD6Q9BX69 1037 aa15.54■□□□□ 0.08
HDAC4-214ENST00000535493 HSD3B7Q9H2F3 369 aa15.54■□□□□ 0.08
HDAC4-214ENST00000535493 IFIT1P09914 478 aaKnown RBP15.54■□□□□ 0.08
HDAC4-214ENST00000535493 H2AFXP16104 143 aaPredicted RBP15.54■□□□□ 0.08
HDAC4-214ENST00000535493 CCDC93Q567U6 631 aa15.54■□□□□ 0.08
HDAC4-214ENST00000535493 MYSM1Q5VVJ2 828 aa15.54■□□□□ 0.08
HDAC4-214ENST00000535493 SYNE3Q6ZMZ3 975 aa15.54■□□□□ 0.08
HDAC4-214ENST00000535493 L2HGDHQ9H9P8 463 aa15.54■□□□□ 0.08
HDAC4-214ENST00000535493 PALLDQ8WX93 1383 aa15.54■□□□□ 0.08
HDAC4-214ENST00000535493 PNMA6AP0CW24 399 aaPredicted RBP15.53■□□□□ 0.08
HDAC4-214ENST00000535493 ATG9AQ7Z3C6 839 aa15.53■□□□□ 0.08
HDAC4-214ENST00000535493 KCNH5Q8NCM2 988 aa15.53■□□□□ 0.08
HDAC4-214ENST00000535493 FAM53CQ9NYF3 392 aa15.53■□□□□ 0.08
HDAC4-214ENST00000535493 CPLX1O14810 134 aa15.53■□□□□ 0.08
HDAC4-214ENST00000535493 PLA2G4AP47712 749 aa15.53■□□□□ 0.08
HDAC4-214ENST00000535493 UBASH3AP57075 661 aa15.53■□□□□ 0.08
HDAC4-214ENST00000535493 ZMYM1Q5SVZ6 1142 aa15.53■□□□□ 0.08
HDAC4-214ENST00000535493 THEMISQ8N1K5 641 aaPredicted RBP15.52■□□□□ 0.08
HDAC4-214ENST00000535493 FBXO18Q8NFZ0 1043 aa15.52■□□□□ 0.08
HDAC4-214ENST00000535493 UBXN4Q92575 508 aa15.52■□□□□ 0.08
HDAC4-214ENST00000535493 AGXT2Q9BYV1 514 aa15.52■□□□□ 0.08
HDAC4-214ENST00000535493 SLC52A2Q9HAB3 445 aa15.52■□□□□ 0.08
HDAC4-214ENST00000535493 FOXN1O15353 648 aa15.52■□□□□ 0.08
HDAC4-214ENST00000535493 PRC1O43663 620 aa15.52■□□□□ 0.08
HDAC4-214ENST00000535493 GYS2P54840 703 aa15.52■□□□□ 0.08
HDAC4-214ENST00000535493 ETF1P62495 437 aaKnown RBP15.52■□□□□ 0.08
HDAC4-214ENST00000535493 BMS1Q14692 1282 aaKnown RBP15.52■□□□□ 0.08
HDAC4-214ENST00000535493 AXDND1Q5T1B0 1012 aaPredicted RBP15.52■□□□□ 0.08
HDAC4-214ENST00000535493 NEK11Q8NG66 645 aa15.52■□□□□ 0.08
HDAC4-214ENST00000535493 PHKBQ93100 1093 aa15.52■□□□□ 0.08
HDAC4-214ENST00000535493 ZNF274Q96GC6 653 aaPredicted RBP15.52■□□□□ 0.08
HDAC4-214ENST00000535493 CCDC34Q96HJ3 373 aa15.52■□□□□ 0.08
HDAC4-214ENST00000535493 ZSWIM4Q9H7M6 989 aa15.52■□□□□ 0.08
HDAC4-214ENST00000535493 TMEM51Q9NW97 253 aa15.52■□□□□ 0.08
HDAC4-214ENST00000535493 SH3TC1Q8TE82 1336 aa15.52■□□□□ 0.07
HDAC4-214ENST00000535493 NLRP12P59046 1061 aa15.52■□□□□ 0.07
HDAC4-214ENST00000535493 LRP10Q7Z4F1 713 aa15.52■□□□□ 0.07
HDAC4-214ENST00000535493 PDILTQ8N807 584 aa15.52■□□□□ 0.07
HDAC4-214ENST00000535493 DSCC1Q9BVC3 393 aa15.52■□□□□ 0.07
HDAC4-214ENST00000535493 IMPACTQ9P2X3 320 aa15.52■□□□□ 0.07
HDAC4-214ENST00000535493 HPS5Q9UPZ3 1129 aa15.52■□□□□ 0.07
HDAC4-214ENST00000535493 ANKARQ7Z5J8 1434 aa15.51■□□□□ 0.07
HDAC4-214ENST00000535493 A0A1B0GUL7 405 aa15.51■□□□□ 0.07
HDAC4-214ENST00000535493 FOXP2O15409 715 aa15.51■□□□□ 0.07
HDAC4-214ENST00000535493 FGAP02671 866 aa15.51■□□□□ 0.07
HDAC4-214ENST00000535493 ADORA1P30542 326 aa15.51■□□□□ 0.07
HDAC4-214ENST00000535493 IRX5P78411 483 aaPredicted RBP15.51■□□□□ 0.07
HDAC4-214ENST00000535493 TRIM65Q6PJ69 517 aa15.51■□□□□ 0.07
HDAC4-214ENST00000535493 TTLL7Q6ZT98 887 aa15.51■□□□□ 0.07
HDAC4-214ENST00000535493 CCDC150Q8NCX0 1101 aa15.51■□□□□ 0.07
HDAC4-214ENST00000535493 MNS1Q8NEH6 495 aa15.51■□□□□ 0.07
HDAC4-214ENST00000535493 FANCLQ9NW38 375 aa15.51■□□□□ 0.07
HDAC4-214ENST00000535493 ZNF330Q9Y3S2 320 aaPredicted RBP15.51■□□□□ 0.07
HDAC4-214ENST00000535493 NCAPD2Q15021 1401 aa15.51■□□□□ 0.07
HDAC4-214ENST00000535493 RNF113AO15541 343 aaKnown RBP15.51■□□□□ 0.07
HDAC4-214ENST00000535493 GNL2Q13823 731 aaKnown RBP15.51■□□□□ 0.07
HDAC4-214ENST00000535493 SCARF1Q14162 830 aa15.51■□□□□ 0.07
HDAC4-214ENST00000535493 RABL6Q3YEC7 729 aaPredicted RBP15.51■□□□□ 0.07
HDAC4-214ENST00000535493 ANO1Q5XXA6 986 aa15.51■□□□□ 0.07
HDAC4-214ENST00000535493 TTC5Q8N0Z6 440 aa15.51■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms