RNA–Protein interactions for RNA: ENST00000534579.5

CTNND1-237, Transcript of catenin delta 1, humanhuman

TSL 5 BASIC

Gene CTNND1, Length 6,024 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-237ENST00000534579 CEP135Q66GS9 1140 aa10.04□□□□□ -0.8
CTNND1-237ENST00000534579 USP37Q86T82 979 aa10.04□□□□□ -0.8
CTNND1-237ENST00000534579 TCHPQ9BT92 498 aa10.04□□□□□ -0.8
CTNND1-237ENST00000534579 JAG2Q9Y219 1238 aa10.04□□□□□ -0.8
CTNND1-237ENST00000534579 NPC1L1Q9UHC9 1359 aa10.04□□□□□ -0.8
CTNND1-237ENST00000534579 KLF18A0A0U1RQI7 1052 aa10.04□□□□□ -0.8
CTNND1-237ENST00000534579 NPHP4O75161 1426 aaPredicted RBP10.04□□□□□ -0.8
CTNND1-237ENST00000534579 MCM3P25205 808 aa10.04□□□□□ -0.8
CTNND1-237ENST00000534579 MAP7D1Q3KQU3 841 aa10.04□□□□□ -0.8
CTNND1-237ENST00000534579 ERMNQ8TAM6 284 aa10.04□□□□□ -0.8
CTNND1-237ENST00000534579 LRRC2Q9BYS8 371 aa10.04□□□□□ -0.8
CTNND1-237ENST00000534579 BABAM1Q9NWV8 329 aa10.04□□□□□ -0.8
CTNND1-237ENST00000534579 RBM8AQ9Y5S9 174 aaKnown RBP10.04□□□□□ -0.8
CTNND1-237ENST00000534579 PARP10Q53GL7 1025 aa10.03□□□□□ -0.8
CTNND1-237ENST00000534579 BRF1Q92994 677 aa10.03□□□□□ -0.8
CTNND1-237ENST00000534579 HECW2Q9P2P5 1572 aa10.03□□□□□ -0.8
CTNND1-237ENST00000534579 PLEKHG1Q9ULL1 1385 aa10.03□□□□□ -0.8
CTNND1-237ENST00000534579 ERICH4A6NGS2 130 aa10.03□□□□□ -0.8
CTNND1-237ENST00000534579 HCLS1P14317 486 aaPredicted RBP10.03□□□□□ -0.8
CTNND1-237ENST00000534579 TERF1P54274 439 aa10.03□□□□□ -0.8
CTNND1-237ENST00000534579 IMPG2Q9BZV3 1241 aa10.03□□□□□ -0.8
CTNND1-237ENST00000534579 CNNM2Q9H8M5 875 aa10.03□□□□□ -0.8
CTNND1-237ENST00000534579 ANAPC4Q9UJX5 808 aa10.03□□□□□ -0.8
CTNND1-237ENST00000534579 MAGI2Q86UL8 1455 aa10.03□□□□□ -0.8
CTNND1-237ENST00000534579 KIF4BQ2VIQ3 1234 aa10.03□□□□□ -0.8
CTNND1-237ENST00000534579 MAGEB6Q8N7X4 407 aa10.03□□□□□ -0.8
CTNND1-237ENST00000534579 METTL22Q9BUU2 404 aaPredicted RBP10.03□□□□□ -0.8
CTNND1-237ENST00000534579 TTC12Q9H892 705 aaPredicted RBP10.03□□□□□ -0.8
CTNND1-237ENST00000534579 CCDC87Q9NVE4 849 aa10.03□□□□□ -0.8
CTNND1-237ENST00000534579 NOC2LQ9Y3T9 749 aaKnown RBP10.03□□□□□ -0.8
CTNND1-237ENST00000534579 SH3TC1Q8TE82 1336 aa10.03□□□□□ -0.8
CTNND1-237ENST00000534579 KRT13P13646 458 aa10.03□□□□□ -0.8
CTNND1-237ENST00000534579 NMIQ13287 307 aaPredicted RBP10.03□□□□□ -0.8
CTNND1-237ENST00000534579 FAM114A1Q8IWE2 563 aa10.03□□□□□ -0.8
CTNND1-237ENST00000534579 MIGA1Q8NAN2 632 aa10.03□□□□□ -0.8
CTNND1-237ENST00000534579 ESYT1Q9BSJ8 1104 aa10.03□□□□□ -0.8
CTNND1-237ENST00000534579 KDM5AP29375 1690 aaKnown RBP10.03□□□□□ -0.8
CTNND1-237ENST00000534579 PAIP2Q9BPZ3 127 aaKnown RBP10.03□□□□□ -0.8
CTNND1-237ENST00000534579 NAA15Q9BXJ9 866 aaKnown RBP10.03□□□□□ -0.8
CTNND1-237ENST00000534579 METP08581 1390 aa10.03□□□□□ -0.8
CTNND1-237ENST00000534579 TTC41PQ6P2S7 1318 aa10.02□□□□□ -0.8
CTNND1-237ENST00000534579 ZSCAN12O43309 604 aa10.02□□□□□ -0.8
CTNND1-237ENST00000534579 MLH3Q9UHC1 1453 aa10.02□□□□□ -0.8
CTNND1-237ENST00000534579 PREX2Q70Z35 1606 aa10.02□□□□□ -0.8
CTNND1-237ENST00000534579 ITGA6P23229 1130 aa10.02□□□□□ -0.81
CTNND1-237ENST00000534579 MAATS1Q7Z4T9 603 aa10.02□□□□□ -0.81
CTNND1-237ENST00000534579 DNAJC10Q8IXB1 793 aa10.02□□□□□ -0.81
CTNND1-237ENST00000534579 DDX12PQ92771 950 aa10.02□□□□□ -0.81
CTNND1-237ENST00000534579 TCEANC2Q96MN5 208 aa10.02□□□□□ -0.81
CTNND1-237ENST00000534579 LRRC27Q9C0I9 530 aa10.02□□□□□ -0.81
CTNND1-237ENST00000534579 RIOK3O14730 519 aaKnown RBP10.02□□□□□ -0.81
CTNND1-237ENST00000534579 ZBTB43O43298 467 aa10.02□□□□□ -0.81
CTNND1-237ENST00000534579 CRCPO75575 148 aa10.02□□□□□ -0.81
CTNND1-237ENST00000534579 LDHBP07195 334 aaKnown RBP10.02□□□□□ -0.81
CTNND1-237ENST00000534579 CCDC172P0C7W6 258 aa10.02□□□□□ -0.81
CTNND1-237ENST00000534579 SSFA2P28290 1259 aa10.02□□□□□ -0.81
CTNND1-237ENST00000534579 PFDN4Q9NQP4 134 aa10.02□□□□□ -0.81
CTNND1-237ENST00000534579 GJA3Q9Y6H8 435 aa10.02□□□□□ -0.81
CTNND1-237ENST00000534579 HOXB7P09629 217 aa10.02□□□□□ -0.81
CTNND1-237ENST00000534579 TOP1P11387 765 aaKnown RBP10.02□□□□□ -0.81
CTNND1-237ENST00000534579 SMC1BQ8NDV3 1235 aa10.02□□□□□ -0.81
CTNND1-237ENST00000534579 RNF113AO15541 343 aaKnown RBP10.02□□□□□ -0.81
CTNND1-237ENST00000534579 CCDC14Q49A88 953 aa10.02□□□□□ -0.81
CTNND1-237ENST00000534579 CFAP58Q5T655 872 aa10.02□□□□□ -0.81
CTNND1-237ENST00000534579 CNNM3Q8NE01 707 aa10.02□□□□□ -0.81
CTNND1-237ENST00000534579 SMARCC2Q8TAQ2 1214 aa10.02□□□□□ -0.81
CTNND1-237ENST00000534579 APBA3O96018 575 aa10.01□□□□□ -0.81
CTNND1-237ENST00000534579 EEF2P13639 858 aaKnown RBP10.01□□□□□ -0.81
CTNND1-237ENST00000534579 GSTA5Q7RTV2 222 aa10.01□□□□□ -0.81
CTNND1-237ENST00000534579 GTPBP4Q9BZE4 634 aaKnown RBP10.01□□□□□ -0.81
CTNND1-237ENST00000534579 DCTPP1Q9H773 170 aa10.01□□□□□ -0.81
CTNND1-237ENST00000534579 TFIP11Q9UBB9 837 aaKnown RBP10.01□□□□□ -0.81
CTNND1-237ENST00000534579 FAM13AO94988 1023 aa10.01□□□□□ -0.81
CTNND1-237ENST00000534579 GAS8O95995 478 aa10.01□□□□□ -0.81
CTNND1-237ENST00000534579 XRCC6P12956 609 aaKnown RBP eCLIP10.01□□□□□ -0.812e-8■□□□□ 8.5
CTNND1-237ENST00000534579 BBXQ8WY36 941 aaPredicted RBP10.01□□□□□ -0.81
CTNND1-237ENST00000534579 CCT6BQ92526 530 aa10.01□□□□□ -0.81
CTNND1-237ENST00000534579 MCM9Q9NXL9 1143 aa10.01□□□□□ -0.81
CTNND1-237ENST00000534579 NLRP1Q9C000 1473 aa10.01□□□□□ -0.81
CTNND1-237ENST00000534579 TMEM110-MUSTN1A8MSY1 372 aa10.01□□□□□ -0.81
CTNND1-237ENST00000534579 CHL1O00533 1208 aa10.01□□□□□ -0.81
CTNND1-237ENST00000534579 UFL1O94874 794 aa10.01□□□□□ -0.81
CTNND1-237ENST00000534579 CALM1P0DP23 149 aa10.01□□□□□ -0.81
CTNND1-237ENST00000534579 CALM2P0DP24 149 aa10.01□□□□□ -0.81
CTNND1-237ENST00000534579 CALM3P0DP25 149 aa10.01□□□□□ -0.81
CTNND1-237ENST00000534579 PLCG2P16885 1265 aa10.01□□□□□ -0.81
CTNND1-237ENST00000534579 C8orf34Q49A92 452 aa10.01□□□□□ -0.81
CTNND1-237ENST00000534579 AKNAD1Q5T1N1 836 aa10.01□□□□□ -0.81
CTNND1-237ENST00000534579 TMTC2Q8N394 836 aa10.01□□□□□ -0.81
CTNND1-237ENST00000534579 UBXN4Q92575 508 aa10.01□□□□□ -0.81
CTNND1-237ENST00000534579 RNF34Q969K3 372 aa10.01□□□□□ -0.81
CTNND1-237ENST00000534579 TRIM35Q9UPQ4 493 aa10.01□□□□□ -0.81
CTNND1-237ENST00000534579 PDE8AO60658 829 aa10.01□□□□□ -0.81
CTNND1-237ENST00000534579 KIAA0753Q2KHM9 967 aa10.01□□□□□ -0.81
CTNND1-237ENST00000534579 PPP4R3BQ5MIZ7 849 aa10.01□□□□□ -0.81
CTNND1-237ENST00000534579 NECAB1Q8N987 351 aa10.01□□□□□ -0.81
CTNND1-237ENST00000534579 ZBTB40Q9NUA8 1239 aa10.01□□□□□ -0.81
CTNND1-237ENST00000534579 EXOC1Q9NV70 894 aa10.01□□□□□ -0.81
CTNND1-237ENST00000534579 GNAT2P19087 354 aa10.01□□□□□ -0.81
CTNND1-237ENST00000534579 GABPAQ06546 454 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms