RNA–Protein interactions for RNA: ENST00000533907.1

RRP8-204, Transcript of ribosomal RNA processing 8, humanhuman

TSL 5

Gene RRP8, Length 1,989 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RRP8-204ENST00000533907 HOMER1Q86YM7 354 aa17.63■□□□□ 0.41
RRP8-204ENST00000533907 UBXN4Q92575 508 aa17.63■□□□□ 0.41
RRP8-204ENST00000533907 ERCC4Q92889 916 aaPredicted RBP17.63■□□□□ 0.41
RRP8-204ENST00000533907 SEC62Q99442 399 aaKnown RBP17.63■□□□□ 0.41
RRP8-204ENST00000533907 DNAJC2Q99543 621 aaKnown RBP17.63■□□□□ 0.41
RRP8-204ENST00000533907 PLEKHG2Q9H7P9 1386 aa17.63■□□□□ 0.41
RRP8-204ENST00000533907 A0A1B0GVL5 298 aa17.62■□□□□ 0.41
RRP8-204ENST00000533907 NEURL1BA8MQ27 555 aa17.62■□□□□ 0.41
RRP8-204ENST00000533907 TULP2O00295 520 aa17.62■□□□□ 0.41
RRP8-204ENST00000533907 IKBKBO14920 756 aa17.62■□□□□ 0.41
RRP8-204ENST00000533907 STK38Q15208 465 aa17.62■□□□□ 0.41
RRP8-204ENST00000533907 RIC3Q7Z5B4 369 aa17.62■□□□□ 0.41
RRP8-204ENST00000533907 LINC00301Q8NCQ3 95 aa17.62■□□□□ 0.41
RRP8-204ENST00000533907 TSPYL1Q9H0U9 437 aa17.62■□□□□ 0.41
RRP8-204ENST00000533907 SLC3A2P08195 630 aaKnown RBP17.62■□□□□ 0.41
RRP8-204ENST00000533907 CCT2P78371 535 aaKnown RBP17.62■□□□□ 0.41
RRP8-204ENST00000533907 GCKRQ14397 625 aa17.62■□□□□ 0.41
RRP8-204ENST00000533907 SF3A1Q15459 793 aaKnown RBP17.62■□□□□ 0.41
RRP8-204ENST00000533907 FCHSD1Q86WN1 690 aa17.62■□□□□ 0.41
RRP8-204ENST00000533907 KBTBD3Q8NAB2 608 aa17.62■□□□□ 0.41
RRP8-204ENST00000533907 MNS1Q8NEH6 495 aa17.62■□□□□ 0.41
RRP8-204ENST00000533907 LRRC59Q96AG4 307 aaKnown RBP17.62■□□□□ 0.41
RRP8-204ENST00000533907 HELLSQ9NRZ9 838 aa17.62■□□□□ 0.41
RRP8-204ENST00000533907 POLR3EQ9NVU0 708 aa17.62■□□□□ 0.41
RRP8-204ENST00000533907 ZKSCAN7Q9P0L1 754 aaPredicted RBP17.62■□□□□ 0.41
RRP8-204ENST00000533907 DNAI1Q9UI46 699 aa17.62■□□□□ 0.41
RRP8-204ENST00000533907 SPEF2Q9C093 1822 aa17.62■□□□□ 0.41
RRP8-204ENST00000533907 DDX60Q8IY21 1712 aaKnown RBP17.61■□□□□ 0.41
RRP8-204ENST00000533907 EFCAB8A8MWE9 144 aa17.61■□□□□ 0.41
RRP8-204ENST00000533907 ATF3P18847 181 aa17.61■□□□□ 0.41
RRP8-204ENST00000533907 TFCP2Q12800 502 aa17.61■□□□□ 0.41
RRP8-204ENST00000533907 NCAPHQ15003 741 aa17.61■□□□□ 0.41
RRP8-204ENST00000533907 PRAMEF22A3QJZ6 481 aa17.6■□□□□ 0.41
RRP8-204ENST00000533907 CBFA2T2O43439 604 aa17.6■□□□□ 0.41
RRP8-204ENST00000533907 TADA3O75528 432 aa17.6■□□□□ 0.41
RRP8-204ENST00000533907 PDIA3P30101 505 aaKnown RBP17.6■□□□□ 0.41
RRP8-204ENST00000533907 RFX5P48382 616 aaPredicted RBP17.6■□□□□ 0.41
RRP8-204ENST00000533907 GUCY1B3Q02153 619 aa17.6■□□□□ 0.41
RRP8-204ENST00000533907 AIMP1Q12904 312 aaKnown RBP17.6■□□□□ 0.41
RRP8-204ENST00000533907 CCDC158Q5M9N0 1113 aa17.6■□□□□ 0.41
RRP8-204ENST00000533907 NCOA5Q9HCD5 579 aaKnown RBP17.6■□□□□ 0.41
RRP8-204ENST00000533907 FANCCQ00597 558 aa17.6■□□□□ 0.41
RRP8-204ENST00000533907 PDIA6Q15084 440 aa17.6■□□□□ 0.41
RRP8-204ENST00000533907 LRRFIP1Q32MZ4 808 aaKnown RBP17.6■□□□□ 0.41
RRP8-204ENST00000533907 EPHA10Q5JZY3 1008 aa17.6■□□□□ 0.41
RRP8-204ENST00000533907 LMOD2Q6P5Q4 547 aa17.6■□□□□ 0.41
RRP8-204ENST00000533907 BRAPQ7Z569 592 aa17.6■□□□□ 0.41
RRP8-204ENST00000533907 SPTLC2O15270 562 aa17.59■□□□□ 0.41
RRP8-204ENST00000533907 FBXL16Q8N461 479 aa17.59■□□□□ 0.41
RRP8-204ENST00000533907 ALS2Q96Q42 1657 aa17.59■□□□□ 0.41
RRP8-204ENST00000533907 E7EWF7 191 aa17.59■□□□□ 0.41
RRP8-204ENST00000533907 ZBTB22O15209 634 aa17.59■□□□□ 0.41
RRP8-204ENST00000533907 MYO1BO43795 1136 aa17.59■□□□□ 0.41
RRP8-204ENST00000533907 PTPN12Q05209 780 aaKnown RBP17.59■□□□□ 0.41
RRP8-204ENST00000533907 GORABQ5T7V8 394 aa17.59■□□□□ 0.41
RRP8-204ENST00000533907 TRIM65Q6PJ69 517 aa17.59■□□□□ 0.41
RRP8-204ENST00000533907 DDX46Q7L014 1031 aaKnown RBP17.59■□□□□ 0.41
RRP8-204ENST00000533907 TXLNBQ8N3L3 684 aa17.59■□□□□ 0.41
RRP8-204ENST00000533907 DBNDD2Q9BQY9 259 aa17.59■□□□□ 0.41
RRP8-204ENST00000533907 NAP1L2Q9ULW6 460 aaPredicted RBP17.59■□□□□ 0.41
RRP8-204ENST00000533907 NDUFB9Q9Y6M9 179 aa17.59■□□□□ 0.41
RRP8-204ENST00000533907 ARFGEF2Q9Y6D5 1785 aa17.58■□□□□ 0.4
RRP8-204ENST00000533907 FDPSP14324 419 aaKnown RBP17.58■□□□□ 0.4
RRP8-204ENST00000533907 METTL22Q9BUU2 404 aaPredicted RBP17.58■□□□□ 0.4
RRP8-204ENST00000533907 TMX1Q9H3N1 280 aa17.58■□□□□ 0.4
RRP8-204ENST00000533907 CLIC4Q9Y696 253 aa17.58■□□□□ 0.4
RRP8-204ENST00000533907 ZSCAN12O43309 604 aa17.57■□□□□ 0.4
RRP8-204ENST00000533907 ZNF202O95125 648 aa17.57■□□□□ 0.4
RRP8-204ENST00000533907 CHGBP05060 677 aa17.57■□□□□ 0.4
RRP8-204ENST00000533907 EVCP57679 992 aa17.57■□□□□ 0.4
RRP8-204ENST00000533907 RABL6Q3YEC7 729 aaPredicted RBP17.57■□□□□ 0.4
RRP8-204ENST00000533907 SYTL4Q96C24 671 aaPredicted RBP17.57■□□□□ 0.4
RRP8-204ENST00000533907 UBXN6Q9BZV1 441 aa17.57■□□□□ 0.4
RRP8-204ENST00000533907 C8orf76Q96K31 380 aa17.57■□□□□ 0.4
RRP8-204ENST00000533907 MYD88Q99836 296 aa17.57■□□□□ 0.4
RRP8-204ENST00000533907 PARP3Q9Y6F1 533 aa17.57■□□□□ 0.4
RRP8-204ENST00000533907 SCN11AQ9UI33 1791 aa17.56■□□□□ 0.4
RRP8-204ENST00000533907 GOLGA6L9A6NEM1 432 aa17.56■□□□□ 0.4
RRP8-204ENST00000533907 BIN1O00499 593 aa17.56■□□□□ 0.4
RRP8-204ENST00000533907 URI1O94763 535 aaPredicted RBP17.56■□□□□ 0.4
RRP8-204ENST00000533907 C4AP0C0L4 1744 aa17.56■□□□□ 0.4
RRP8-204ENST00000533907 C4BP0C0L5 1744 aa17.56■□□□□ 0.4
RRP8-204ENST00000533907 CMA1P23946 247 aa17.56■□□□□ 0.4
RRP8-204ENST00000533907 LMOD1P29536 600 aaPredicted RBP17.56■□□□□ 0.4
RRP8-204ENST00000533907 HNRNPH2P55795 449 aaKnown RBP17.56■□□□□ 0.4
RRP8-204ENST00000533907 ZMYM1Q5SVZ6 1142 aa17.56■□□□□ 0.4
RRP8-204ENST00000533907 MYSM1Q5VVJ2 828 aa17.56■□□□□ 0.4
RRP8-204ENST00000533907 CADPS2Q86UW7 1296 aa17.56■□□□□ 0.4
RRP8-204ENST00000533907 REXO1L1PQ8IX06 675 aa17.56■□□□□ 0.4
RRP8-204ENST00000533907 FMNL2Q96PY5 1086 aa17.56■□□□□ 0.4
RRP8-204ENST00000533907 MPHOSPH8Q99549 860 aa17.56■□□□□ 0.4
RRP8-204ENST00000533907 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.56■□□□□ 0.48e-7■■■■■ 31.3
RRP8-204ENST00000533907 TMEM94Q12767 1356 aa17.56■□□□□ 0.4
RRP8-204ENST00000533907 PFKFB1P16118 471 aa17.55■□□□□ 0.4
RRP8-204ENST00000533907 MUM1L1Q5H9M0 696 aa17.55■□□□□ 0.4
RRP8-204ENST00000533907 RGS22Q8NE09 1264 aa17.55■□□□□ 0.4
RRP8-204ENST00000533907 PAG1Q9NWQ8 432 aa17.55■□□□□ 0.4
RRP8-204ENST00000533907 AXIN2Q9Y2T1 843 aa17.55■□□□□ 0.4
RRP8-204ENST00000533907 DHX16O60231 1041 aaKnown RBP17.55■□□□□ 0.4
RRP8-204ENST00000533907 UBASH3AP57075 661 aa17.55■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms