RNA–Protein interactions for RNA: ENST00000533870.1

SOX6-217, Transcript of SRY-box 6, humanhuman

TSL 5

Gene SOX6, Length 7,224 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6-217ENST00000533870 NEO1Q92859 1461 aa4.6□□□□□ -1.67
SOX6-217ENST00000533870 LMTK2Q8IWU2 1503 aa4.6□□□□□ -1.67
SOX6-217ENST00000533870 MLH3Q9UHC1 1453 aa4.6□□□□□ -1.67
SOX6-217ENST00000533870 MYO1CO00159 1063 aa4.6□□□□□ -1.67
SOX6-217ENST00000533870 MAP2K2P36507 400 aa4.6□□□□□ -1.67
SOX6-217ENST00000533870 ST5P78524 1137 aa4.6□□□□□ -1.67
SOX6-217ENST00000533870 KIF5AQ12840 1032 aa4.6□□□□□ -1.67
SOX6-217ENST00000533870 RRP12Q5JTH9 1297 aaKnown RBP4.6□□□□□ -1.67
SOX6-217ENST00000533870 CERS3Q8IU89 383 aa4.6□□□□□ -1.67
SOX6-217ENST00000533870 FBXO18Q8NFZ0 1043 aa4.6□□□□□ -1.67
SOX6-217ENST00000533870 SUDS3Q9H7L9 328 aaPredicted RBP4.6□□□□□ -1.67
SOX6-217ENST00000533870 DAAM1Q9Y4D1 1078 aa4.6□□□□□ -1.67
SOX6-217ENST00000533870 CDK12Q9NYV4 1490 aaPredicted RBP4.6□□□□□ -1.67
SOX6-217ENST00000533870 AKR1B10O60218 316 aa4.6□□□□□ -1.67
SOX6-217ENST00000533870 ANXA13P27216 316 aa4.6□□□□□ -1.67
SOX6-217ENST00000533870 AIMP1Q12904 312 aaKnown RBP4.6□□□□□ -1.67
SOX6-217ENST00000533870 NEDD9Q14511 834 aa4.6□□□□□ -1.67
SOX6-217ENST00000533870 SYT10Q6XYQ8 523 aa4.6□□□□□ -1.67
SOX6-217ENST00000533870 LRRC8AQ8IWT6 810 aa4.6□□□□□ -1.67
SOX6-217ENST00000533870 AOPEPQ8N6M6 819 aa4.6□□□□□ -1.67
SOX6-217ENST00000533870 NAP1L3Q99457 506 aaPredicted RBP4.6□□□□□ -1.67
SOX6-217ENST00000533870 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP4.6□□□□□ -1.67
SOX6-217ENST00000533870 JRKLQ9Y4A0 524 aa4.6□□□□□ -1.67
SOX6-217ENST00000533870 RPAP1Q9BWH6 1393 aaPredicted RBP4.6□□□□□ -1.67
SOX6-217ENST00000533870 HSF2BPO75031 334 aa4.6□□□□□ -1.67
SOX6-217ENST00000533870 PCP11498 1178 aaKnown RBP4.6□□□□□ -1.67
SOX6-217ENST00000533870 TATP17735 454 aaPredicted RBP4.6□□□□□ -1.67
SOX6-217ENST00000533870 POLA2Q14181 598 aa4.6□□□□□ -1.67
SOX6-217ENST00000533870 ANO1Q5XXA6 986 aa4.6□□□□□ -1.67
SOX6-217ENST00000533870 HOOK3Q86VS8 718 aa4.6□□□□□ -1.67
SOX6-217ENST00000533870 OTUD6BQ8N6M0 293 aa4.6□□□□□ -1.67
SOX6-217ENST00000533870 KBTBD3Q8NAB2 608 aa4.6□□□□□ -1.67
SOX6-217ENST00000533870 ANKRD27Q96NW4 1050 aa4.6□□□□□ -1.67
SOX6-217ENST00000533870 UBAC1Q9BSL1 405 aa4.6□□□□□ -1.67
SOX6-217ENST00000533870 CHUKO15111 745 aa4.6□□□□□ -1.67
SOX6-217ENST00000533870 PPP1R12BO60237 982 aaPredicted RBP4.6□□□□□ -1.67
SOX6-217ENST00000533870 BUB1BO60566 1050 aaPredicted RBP4.6□□□□□ -1.67
SOX6-217ENST00000533870 HSPA6P17066 643 aa4.6□□□□□ -1.67
SOX6-217ENST00000533870 SLC39A14Q15043 492 aa4.6□□□□□ -1.67
SOX6-217ENST00000533870 NBPF14Q5TI25 921 aa4.6□□□□□ -1.67
SOX6-217ENST00000533870 CCDC121Q6ZUS5 278 aa4.6□□□□□ -1.67
SOX6-217ENST00000533870 OSCARQ8IYS5 282 aa4.6□□□□□ -1.67
SOX6-217ENST00000533870 BATF3Q9NR55 127 aa4.6□□□□□ -1.67
SOX6-217ENST00000533870 TOMM22Q9NS69 142 aa4.6□□□□□ -1.67
SOX6-217ENST00000533870 GEMIN8Q9NWZ8 242 aaKnown RBP4.6□□□□□ -1.67
SOX6-217ENST00000533870 HDAC9Q9UKV0 1011 aa4.6□□□□□ -1.67
SOX6-217ENST00000533870 PNMA6AP0CW24 399 aaPredicted RBP4.59□□□□□ -1.67
SOX6-217ENST00000533870 ITIH3Q06033 890 aa4.59□□□□□ -1.67
SOX6-217ENST00000533870 ELF2Q15723 593 aa4.59□□□□□ -1.67
SOX6-217ENST00000533870 RAI14Q9P0K7 980 aa4.59□□□□□ -1.67
SOX6-217ENST00000533870 CARMIL3Q8ND23 1372 aa4.59□□□□□ -1.67
SOX6-217ENST00000533870 EIF2S2P20042 333 aaKnown RBP4.59□□□□□ -1.67
SOX6-217ENST00000533870 AKAP4Q5JQC9 854 aa4.59□□□□□ -1.67
SOX6-217ENST00000533870 NYAP1Q6ZVC0 841 aa4.59□□□□□ -1.67
SOX6-217ENST00000533870 PPIL4Q8WUA2 492 aaKnown RBP eCLIP4.59□□□□□ -1.67
SOX6-217ENST00000533870 STAG1Q8WVM7 1258 aa4.59□□□□□ -1.67
SOX6-217ENST00000533870 KIF2CQ99661 725 aa4.59□□□□□ -1.67
SOX6-217ENST00000533870 GLT8D2Q9H1C3 349 aa4.59□□□□□ -1.67
SOX6-217ENST00000533870 CUEDC2Q9H467 287 aa4.59□□□□□ -1.67
SOX6-217ENST00000533870 SWAP70Q9UH65 585 aa4.59□□□□□ -1.67
SOX6-217ENST00000533870 WWC3Q9ULE0 1092 aa4.59□□□□□ -1.67
SOX6-217ENST00000533870 MRVI1Q9Y6F6 885 aa4.59□□□□□ -1.67
SOX6-217ENST00000533870 USH1CQ9Y6N9 552 aa4.59□□□□□ -1.67
SOX6-217ENST00000533870 RNF113AO15541 343 aaKnown RBP4.59□□□□□ -1.67
SOX6-217ENST00000533870 U2AF2P26368 475 aaKnown RBP eCLIP4.59□□□□□ -1.67
SOX6-217ENST00000533870 KIF5BP33176 963 aa4.59□□□□□ -1.67
SOX6-217ENST00000533870 ABCC1P33527 1531 aa4.59□□□□□ -1.67
SOX6-217ENST00000533870 FOXD4L6Q3SYB3 417 aaPredicted RBP4.59□□□□□ -1.67
SOX6-217ENST00000533870 CYP26C1Q6V0L0 522 aa4.59□□□□□ -1.67
SOX6-217ENST00000533870 FOXD4L3Q6VB84 417 aaPredicted RBP4.59□□□□□ -1.67
SOX6-217ENST00000533870 GBP7Q8N8V2 638 aaPredicted RBP4.59□□□□□ -1.67
SOX6-217ENST00000533870 RTL9Q8NET4 1388 aa4.59□□□□□ -1.67
SOX6-217ENST00000533870 PCMTD1Q96MG8 357 aaPredicted RBP4.59□□□□□ -1.67
SOX6-217ENST00000533870 PANX2Q96RD6 677 aa4.59□□□□□ -1.67
SOX6-217ENST00000533870 LSG1Q9H089 658 aaKnown RBP4.59□□□□□ -1.67
SOX6-217ENST00000533870 ATG3Q9NT62 314 aa4.59□□□□□ -1.67
SOX6-217ENST00000533870 CHMP3Q9Y3E7 222 aa4.59□□□□□ -1.67
SOX6-217ENST00000533870 ERICH4A6NGS2 130 aa4.59□□□□□ -1.67
SOX6-217ENST00000533870 PPP6R2O75170 966 aa4.59□□□□□ -1.67
SOX6-217ENST00000533870 GUCY2CP25092 1073 aa4.59□□□□□ -1.67
SOX6-217ENST00000533870 OAS2P29728 719 aaKnown RBP4.59□□□□□ -1.67
SOX6-217ENST00000533870 ANKS4BQ8N8V4 417 aa4.59□□□□□ -1.67
SOX6-217ENST00000533870 GDPD2Q9HCC8 539 aa4.59□□□□□ -1.67
SOX6-217ENST00000533870 SNRKQ9NRH2 765 aa4.59□□□□□ -1.67
SOX6-217ENST00000533870 STK24Q9Y6E0 443 aa4.59□□□□□ -1.67
SOX6-217ENST00000533870 LUC7L3O95232 432 aaKnown RBP4.59□□□□□ -1.68
SOX6-217ENST00000533870 LIG1P18858 919 aa4.59□□□□□ -1.68
SOX6-217ENST00000533870 LONRF2Q1L5Z9 754 aa4.59□□□□□ -1.68
SOX6-217ENST00000533870 VSTM4Q8IW00 320 aa4.59□□□□□ -1.68
SOX6-217ENST00000533870 TRIM58Q8NG06 486 aa4.59□□□□□ -1.68
SOX6-217ENST00000533870 TSG101Q99816 390 aa4.59□□□□□ -1.68
SOX6-217ENST00000533870 PRDM10Q9NQV6 1147 aa4.59□□□□□ -1.68
SOX6-217ENST00000533870 GOLGA8BA8MQT2 603 aa4.58□□□□□ -1.68
SOX6-217ENST00000533870 NDUFAB1O14561 156 aa4.58□□□□□ -1.68
SOX6-217ENST00000533870 NEFHP12036 1026 aa4.58□□□□□ -1.68
SOX6-217ENST00000533870 EEF1GP26641 437 aaKnown RBP4.58□□□□□ -1.68
SOX6-217ENST00000533870 CACTINQ8WUQ7 758 aaKnown RBP4.58□□□□□ -1.68
SOX6-217ENST00000533870 RBM33Q96EV2 1170 aaKnown RBP4.58□□□□□ -1.68
SOX6-217ENST00000533870 CALR3Q96L12 384 aaKnown RBP4.58□□□□□ -1.68
SOX6-217ENST00000533870 TRIM34Q9BYJ4 488 aa4.58□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms