RNA–Protein interactions for RNA: ENST00000533820.5

CAPN1-226, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,083 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-226ENST00000533820 ZRSR1Q15695 479 aaKnown RBP22.54■■□□□ 1.2
CAPN1-226ENST00000533820 CWC25Q9NXE8 425 aaPredicted RBP22.54■■□□□ 1.2
CAPN1-226ENST00000533820 RNF113AO15541 343 aaKnown RBP22.53■■□□□ 1.2
CAPN1-226ENST00000533820 HELLSQ9NRZ9 838 aa22.53■■□□□ 1.2
CAPN1-226ENST00000533820 ANO10Q9NW15 660 aa22.53■■□□□ 1.2
CAPN1-226ENST00000533820 CEP57L1Q8IYX8 460 aa22.53■■□□□ 1.2
CAPN1-226ENST00000533820 ENGASEQ8NFI3 743 aa22.53■■□□□ 1.2
CAPN1-226ENST00000533820 DSCC1Q9BVC3 393 aa22.53■■□□□ 1.2
CAPN1-226ENST00000533820 CARMIL3Q8ND23 1372 aa22.53■■□□□ 1.2
CAPN1-226ENST00000533820 DPCR1Q3MIW9 517 aa22.52■■□□□ 1.2
CAPN1-226ENST00000533820 SMC2O95347 1197 aa22.52■■□□□ 1.2
CAPN1-226ENST00000533820 RXRAP19793 462 aa22.52■■□□□ 1.2
CAPN1-226ENST00000533820 KLF18A0A0U1RQI7 1052 aa22.51■■□□□ 1.19
CAPN1-226ENST00000533820 MRPS27Q92552 414 aaKnown RBP22.51■■□□□ 1.19
CAPN1-226ENST00000533820 TRIM34Q9BYJ4 488 aa22.51■■□□□ 1.19
CAPN1-226ENST00000533820 GOLGA8BA8MQT2 603 aa22.51■■□□□ 1.19
CAPN1-226ENST00000533820 H7C1W4 665 aa22.51■■□□□ 1.19
CAPN1-226ENST00000533820 CTAGE5O15320 804 aa22.51■■□□□ 1.19
CAPN1-226ENST00000533820 BRD2P25440 801 aaKnown RBP22.51■■□□□ 1.19
CAPN1-226ENST00000533820 PTPN14Q15678 1187 aa22.51■■□□□ 1.19
CAPN1-226ENST00000533820 C8orf76Q96K31 380 aa22.51■■□□□ 1.19
CAPN1-226ENST00000533820 EYA2O00167 538 aa22.51■■□□□ 1.19
CAPN1-226ENST00000533820 DENND2AQ9ULE3 1009 aa22.51■■□□□ 1.19
CAPN1-226ENST00000533820 IL15P40933 162 aaPredicted RBP22.5■■□□□ 1.19
CAPN1-226ENST00000533820 SCARF1Q14162 830 aa22.5■■□□□ 1.19
CAPN1-226ENST00000533820 ORC3Q9UBD5 711 aaPredicted RBP22.5■■□□□ 1.19
CAPN1-226ENST00000533820 MRC1P22897 1456 aa22.5■■□□□ 1.19
CAPN1-226ENST00000533820 MARCKSP29966 332 aaPredicted RBP22.5■■□□□ 1.19
CAPN1-226ENST00000533820 PTPN21Q16825 1174 aa22.5■■□□□ 1.19
CAPN1-226ENST00000533820 CPLX1O14810 134 aa22.49■■□□□ 1.19
CAPN1-226ENST00000533820 MRFAP1L1Q96HT8 127 aa22.49■■□□□ 1.19
CAPN1-226ENST00000533820 AIFM3Q96NN9 605 aa22.49■■□□□ 1.19
CAPN1-226ENST00000533820 CEP126Q9P2H0 1117 aa22.49■■□□□ 1.19
CAPN1-226ENST00000533820 TTC39AQ5SRH9 613 aa22.49■■□□□ 1.19
CAPN1-226ENST00000533820 ZNF215Q9UL58 517 aaPredicted RBP22.49■■□□□ 1.19
CAPN1-226ENST00000533820 PRC1O43663 620 aa22.49■■□□□ 1.19
CAPN1-226ENST00000533820 FMR1NBQ8N0W7 255 aaPredicted RBP22.49■■□□□ 1.19
CAPN1-226ENST00000533820 AFDNP55196 1824 aaKnown RBP22.48■■□□□ 1.19
CAPN1-226ENST00000533820 SIPA1L3O60292 1781 aaPredicted RBP22.48■■□□□ 1.19
CAPN1-226ENST00000533820 CAVIN2O95810 425 aa22.48■■□□□ 1.19
CAPN1-226ENST00000533820 FGAP02671 866 aa22.48■■□□□ 1.19
CAPN1-226ENST00000533820 SARM1Q6SZW1 724 aa22.48■■□□□ 1.19
CAPN1-226ENST00000533820 IFNKQ9P0W0 207 aa22.48■■□□□ 1.19
CAPN1-226ENST00000533820 SLIT3O75094 1523 aa22.47■■□□□ 1.19
CAPN1-226ENST00000533820 CCZ1BP86790 482 aa22.47■■□□□ 1.19
CAPN1-226ENST00000533820 CCZ1P86791 482 aaPredicted RBP22.47■■□□□ 1.19
CAPN1-226ENST00000533820 SALL1Q9NSC2 1324 aa22.47■■□□□ 1.19
CAPN1-226ENST00000533820 TMC6Q7Z403 805 aa22.47■■□□□ 1.19
CAPN1-226ENST00000533820 ZNF274Q96GC6 653 aaPredicted RBP22.47■■□□□ 1.19
CAPN1-226ENST00000533820 PUS7LQ9H0K6 701 aaKnown RBP22.47■■□□□ 1.19
CAPN1-226ENST00000533820 PAXBP1Q9Y5B6 917 aa22.47■■□□□ 1.19
CAPN1-226ENST00000533820 PALLDQ8WX93 1383 aa22.47■■□□□ 1.19
CAPN1-226ENST00000533820 ERICH4A6NGS2 130 aa22.46■■□□□ 1.19
CAPN1-226ENST00000533820 CHRM1P11229 460 aaPredicted RBP22.46■■□□□ 1.19
CAPN1-226ENST00000533820 KIF28PB7ZC32 967 aa22.46■■□□□ 1.19
CAPN1-226ENST00000533820 CDC25BP30305 580 aa22.46■■□□□ 1.19
CAPN1-226ENST00000533820 ZAP70P43403 619 aa22.46■■□□□ 1.19
CAPN1-226ENST00000533820 SYNE4Q8N205 404 aa22.46■■□□□ 1.19
CAPN1-226ENST00000533820 LINC00301Q8NCQ3 95 aa22.46■■□□□ 1.19
CAPN1-226ENST00000533820 FAM89AQ96GI7 184 aa22.46■■□□□ 1.19
CAPN1-226ENST00000533820 AGXT2Q9BYV1 514 aa22.46■■□□□ 1.19
CAPN1-226ENST00000533820 XPO4Q9C0E2 1151 aaKnown RBP22.46■■□□□ 1.19
CAPN1-226ENST00000533820 LMOD1P29536 600 aaPredicted RBP22.46■■□□□ 1.19
CAPN1-226ENST00000533820 IMMTQ16891 758 aaKnown RBP22.46■■□□□ 1.19
CAPN1-226ENST00000533820 CCDC57Q2TAC2 916 aa22.46■■□□□ 1.19
CAPN1-226ENST00000533820 SYNE3Q6ZMZ3 975 aa22.46■■□□□ 1.19
CAPN1-226ENST00000533820 XAGE2Q96GT9 111 aa22.46■■□□□ 1.19
CAPN1-226ENST00000533820 NAT10Q9H0A0 1025 aaKnown RBP22.45■■□□□ 1.18
CAPN1-226ENST00000533820 LAMA4Q16363 1823 aa22.45■■□□□ 1.18
CAPN1-226ENST00000533820 SPTLC2O15270 562 aa22.45■■□□□ 1.18
CAPN1-226ENST00000533820 FOXP2O15409 715 aa22.45■■□□□ 1.18
CAPN1-226ENST00000533820 CCDC158Q5M9N0 1113 aa22.45■■□□□ 1.18
CAPN1-226ENST00000533820 RALYLQ86SE5 291 aaKnown RBP22.45■■□□□ 1.18
CAPN1-226ENST00000533820 RFX7Q2KHR2 1363 aa22.45■■□□□ 1.18
CAPN1-226ENST00000533820 ADALQ6DHV7 355 aa22.44■■□□□ 1.18
CAPN1-226ENST00000533820 NBPF11Q86T75 865 aa22.44■■□□□ 1.18
CAPN1-226ENST00000533820 STK11IPQ8N1F8 1099 aa22.44■■□□□ 1.18
CAPN1-226ENST00000533820 KIAA1468Q9P260 1216 aa22.44■■□□□ 1.18
CAPN1-226ENST00000533820 APPP05067 770 aa22.44■■□□□ 1.18
CAPN1-226ENST00000533820 NKX2-3Q8TAU0 364 aa22.44■■□□□ 1.18
CAPN1-226ENST00000533820 RTEL1Q9NZ71 1219 aa22.44■■□□□ 1.18
CAPN1-226ENST00000533820 SLC3A2P08195 630 aaKnown RBP22.43■■□□□ 1.18
CAPN1-226ENST00000533820 ATF3P18847 181 aa22.43■■□□□ 1.18
CAPN1-226ENST00000533820 HSP90AA4PQ58FG1 418 aa22.43■■□□□ 1.18
CAPN1-226ENST00000533820 CCAR2Q8N163 923 aaKnown RBP22.43■■□□□ 1.18
CAPN1-226ENST00000533820 MYSM1Q5VVJ2 828 aa22.43■■□□□ 1.18
CAPN1-226ENST00000533820 ZNF202O95125 648 aa22.42■■□□□ 1.18
CAPN1-226ENST00000533820 ELF2Q15723 593 aa22.42■■□□□ 1.18
CAPN1-226ENST00000533820 FBXO18Q8NFZ0 1043 aa22.42■■□□□ 1.18
CAPN1-226ENST00000533820 C19orf44Q9H6X5 657 aa22.42■■□□□ 1.18
CAPN1-226ENST00000533820 CTNNA3Q9UI47 895 aa22.42■■□□□ 1.18
CAPN1-226ENST00000533820 HPS5Q9UPZ3 1129 aa22.42■■□□□ 1.18
CAPN1-226ENST00000533820 PHRF1Q9P1Y6 1649 aaKnown RBP22.42■■□□□ 1.18
CAPN1-226ENST00000533820 CAPN2P17655 700 aa22.42■■□□□ 1.18
CAPN1-226ENST00000533820 ANTXR2P58335 489 aa22.42■■□□□ 1.18
CAPN1-226ENST00000533820 RBM6P78332 1123 aaKnown RBP22.42■■□□□ 1.18
CAPN1-226ENST00000533820 C1orf167Q5SNV9 1468 aa22.42■■□□□ 1.18
CAPN1-226ENST00000533820 PHKBQ93100 1093 aa22.42■■□□□ 1.18
CAPN1-226ENST00000533820 TIGD1Q96MW7 591 aa22.42■■□□□ 1.18
CAPN1-226ENST00000533820 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP22.42■■□□□ 1.182e-6■■□□□ 11.9
Retrieved 100 of 20,778 RNA–protein pairs in 88 ms