RNA–Protein interactions for RNA: ENST00000533818.5

CSDE1-215, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-215ENST00000533818 SYN1P17600 705 aa13.99□□□□□ -0.17
CSDE1-215ENST00000533818 CAPN2P17655 700 aa13.99□□□□□ -0.17
CSDE1-215ENST00000533818 NBPF12Q5TAG4 269 aaPredicted RBP13.99□□□□□ -0.17
CSDE1-215ENST00000533818 HELBQ8NG08 1087 aaPredicted RBP13.99□□□□□ -0.17
CSDE1-215ENST00000533818 PNISRQ8TF01 805 aaKnown RBP13.99□□□□□ -0.17
CSDE1-215ENST00000533818 FAM89AQ96GI7 184 aa13.99□□□□□ -0.17
CSDE1-215ENST00000533818 ZBED3Q96IU2 234 aaPredicted RBP13.99□□□□□ -0.17
CSDE1-215ENST00000533818 EYSQ5T1H1 3165 aa13.99□□□□□ -0.17
CSDE1-215ENST00000533818 OSBPP22059 807 aa13.98□□□□□ -0.17
CSDE1-215ENST00000533818 CTGFP29279 349 aa13.98□□□□□ -0.17
CSDE1-215ENST00000533818 AIMP1Q12904 312 aaKnown RBP13.98□□□□□ -0.17
CSDE1-215ENST00000533818 STRIP1Q5VSL9 837 aa13.98□□□□□ -0.17
CSDE1-215ENST00000533818 NECAB2Q7Z6G3 386 aa13.98□□□□□ -0.17
CSDE1-215ENST00000533818 KIAA0825Q8IV33 1275 aa13.98□□□□□ -0.17
CSDE1-215ENST00000533818 CNKSR2Q8WXI2 1034 aa13.98□□□□□ -0.17
CSDE1-215ENST00000533818 LAMB1P07942 1786 aa13.98□□□□□ -0.17
CSDE1-215ENST00000533818 MYPNQ86TC9 1320 aa13.97□□□□□ -0.17
CSDE1-215ENST00000533818 ANXA1P04083 346 aa13.97□□□□□ -0.17
CSDE1-215ENST00000533818 MAP3K12Q12852 859 aa13.97□□□□□ -0.17
CSDE1-215ENST00000533818 PDIA6Q15084 440 aa13.97□□□□□ -0.17
CSDE1-215ENST00000533818 DLGAP5Q15398 846 aa13.97□□□□□ -0.17
CSDE1-215ENST00000533818 COPS6Q7L5N1 327 aa13.97□□□□□ -0.17
CSDE1-215ENST00000533818 DEFB118Q96PH6 123 aa13.97□□□□□ -0.17
CSDE1-215ENST00000533818 COL4A1P02462 1669 aa13.97□□□□□ -0.17
CSDE1-215ENST00000533818 XDHP47989 1333 aa13.96□□□□□ -0.17
CSDE1-215ENST00000533818 EIF2S2P20042 333 aaKnown RBP13.96□□□□□ -0.17
CSDE1-215ENST00000533818 ATP2B4P23634 1241 aa13.96□□□□□ -0.17
CSDE1-215ENST00000533818 PROSER3Q2NL68 480 aa13.96□□□□□ -0.17
CSDE1-215ENST00000533818 RTL5Q5HYW3 569 aaPredicted RBP13.96□□□□□ -0.17
CSDE1-215ENST00000533818 CDX2Q99626 313 aaPredicted RBP13.96□□□□□ -0.17
CSDE1-215ENST00000533818 SEC31BQ9NQW1 1179 aa13.96□□□□□ -0.17
CSDE1-215ENST00000533818 ZSWIM8A7E2V4 1837 aa13.96□□□□□ -0.17
CSDE1-215ENST00000533818 ZNF697Q5TEC3 545 aa13.95□□□□□ -0.18
CSDE1-215ENST00000533818 C17orf99Q6UX52 265 aa13.95□□□□□ -0.18
CSDE1-215ENST00000533818 SLAIN1Q8ND83 568 aa13.95□□□□□ -0.18
CSDE1-215ENST00000533818 ZCCHC17Q9NP64 241 aaKnown RBP13.95□□□□□ -0.18
CSDE1-215ENST00000533818 CPA4Q9UI42 421 aa13.95□□□□□ -0.18
CSDE1-215ENST00000533818 PSME4Q14997 1843 aa13.94□□□□□ -0.18
CSDE1-215ENST00000533818 ZNF804BA4D1E1 1349 aa13.94□□□□□ -0.18
CSDE1-215ENST00000533818 COL3A1P02461 1466 aaPredicted RBP13.94□□□□□ -0.18
CSDE1-215ENST00000533818 BTBD19C9JJ37 291 aa13.94□□□□□ -0.18
CSDE1-215ENST00000533818 CETPP11597 493 aa13.94□□□□□ -0.18
CSDE1-215ENST00000533818 TTLL5Q6EMB2 1281 aa13.94□□□□□ -0.18
CSDE1-215ENST00000533818 XAGE3Q8WTP9 111 aa13.94□□□□□ -0.18
CSDE1-215ENST00000533818 MUC3AQ02505 3323 aa13.94□□□□□ -0.18
CSDE1-215ENST00000533818 CLRN2A0PK11 232 aa13.93□□□□□ -0.18
CSDE1-215ENST00000533818 IRS4O14654 1257 aaPredicted RBP13.93□□□□□ -0.18
CSDE1-215ENST00000533818 PRKCZQ05513 592 aa13.93□□□□□ -0.18
CSDE1-215ENST00000533818 TJAP1Q5JTD0 557 aa13.93□□□□□ -0.18
CSDE1-215ENST00000533818 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.93□□□□□ -0.18
CSDE1-215ENST00000533818 DIS3LQ8TF46 1054 aaKnown RBP13.93□□□□□ -0.18
CSDE1-215ENST00000533818 VEZTQ9HBM0 779 aa13.93□□□□□ -0.18
CSDE1-215ENST00000533818 LAMA2P24043 3122 aaKnown RBP13.93□□□□□ -0.18
CSDE1-215ENST00000533818 FAM205AQ6ZU69 1335 aa13.92□□□□□ -0.18
CSDE1-215ENST00000533818 MYO1BO43795 1136 aa13.92□□□□□ -0.18
CSDE1-215ENST00000533818 RASA3Q14644 834 aa13.92□□□□□ -0.18
CSDE1-215ENST00000533818 CC2D1BQ5T0F9 858 aaKnown RBP13.92□□□□□ -0.18
CSDE1-215ENST00000533818 COA1Q9GZY4 146 aa13.92□□□□□ -0.18
CSDE1-215ENST00000533818 CRISPLD2Q9H0B8 497 aa13.92□□□□□ -0.18
CSDE1-215ENST00000533818 ADCY3O60266 1144 aa13.91□□□□□ -0.18
CSDE1-215ENST00000533818 MAP3K9P80192 1104 aa13.91□□□□□ -0.18
CSDE1-215ENST00000533818 VGLL4Q14135 290 aa13.91□□□□□ -0.18
CSDE1-215ENST00000533818 CSADQ9Y600 493 aa13.91□□□□□ -0.18
CSDE1-215ENST00000533818 ATP5J2-PTCD1G3V325 749 aa13.9□□□□□ -0.18
CSDE1-215ENST00000533818 INHAP05111 366 aa13.9□□□□□ -0.18
CSDE1-215ENST00000533818 MTMR14Q8NCE2 650 aa13.9□□□□□ -0.18
CSDE1-215ENST00000533818 PAK6Q9NQU5 681 aaPredicted RBP13.9□□□□□ -0.18
CSDE1-215ENST00000533818 PCDHAC2Q9Y5I4 1007 aa13.9□□□□□ -0.18
CSDE1-215ENST00000533818 MED23Q9ULK4 1368 aa13.9□□□□□ -0.18
CSDE1-215ENST00000533818 ADGRA2Q96PE1 1338 aa13.9□□□□□ -0.19
CSDE1-215ENST00000533818 SYNGAP1Q96PV0 1343 aa13.9□□□□□ -0.19
CSDE1-215ENST00000533818 U2AF1L5P0DN76 240 aaPredicted RBP13.89□□□□□ -0.19
CSDE1-215ENST00000533818 ELNP15502 786 aa13.89□□□□□ -0.19
CSDE1-215ENST00000533818 GTF2IP78347 998 aa13.89□□□□□ -0.19
CSDE1-215ENST00000533818 U2AF1Q01081 240 aaKnown RBP eCLIP13.89□□□□□ -0.19
CSDE1-215ENST00000533818 SNAPC2Q13487 334 aa13.89□□□□□ -0.19
CSDE1-215ENST00000533818 ANKRD18AQ8IVF6 992 aa13.89□□□□□ -0.19
CSDE1-215ENST00000533818 MYLIPQ8WY64 445 aa13.89□□□□□ -0.19
CSDE1-215ENST00000533818 SNX27Q96L92 541 aa13.89□□□□□ -0.19
CSDE1-215ENST00000533818 ISCA1Q9BUE6 129 aa13.89□□□□□ -0.19
CSDE1-215ENST00000533818 NBPF3Q9H094 633 aa13.89□□□□□ -0.19
CSDE1-215ENST00000533818 SEMA6BQ9H3T3 888 aa13.89□□□□□ -0.19
CSDE1-215ENST00000533818 GABRQQ9UN88 632 aa13.89□□□□□ -0.19
CSDE1-215ENST00000533818 SPDYE5A6NIY4 337 aa13.88□□□□□ -0.19
CSDE1-215ENST00000533818 FCGRTP55899 365 aa13.88□□□□□ -0.19
CSDE1-215ENST00000533818 MDM2Q00987 491 aaPredicted RBP13.88□□□□□ -0.19
CSDE1-215ENST00000533818 CCDC152Q4G0S7 254 aa13.88□□□□□ -0.19
CSDE1-215ENST00000533818 ANKLE1Q8NAG6 615 aa13.88□□□□□ -0.19
CSDE1-215ENST00000533818 PRMT6Q96LA8 375 aaPredicted RBP13.88□□□□□ -0.19
CSDE1-215ENST00000533818 NUDCQ9Y266 331 aa13.88□□□□□ -0.19
CSDE1-215ENST00000533818 SPDYE2BA6NHP3 402 aa13.87□□□□□ -0.19
CSDE1-215ENST00000533818 SPDYE6P0CI01 402 aa13.87□□□□□ -0.19
CSDE1-215ENST00000533818 CFAP100Q494V2 611 aa13.87□□□□□ -0.19
CSDE1-215ENST00000533818 CCDC85AQ96PX6 553 aaPredicted RBP13.87□□□□□ -0.19
CSDE1-215ENST00000533818 ALPK3Q96L96 1907 aa13.87□□□□□ -0.19
CSDE1-215ENST00000533818 IRF6O14896 467 aa13.86□□□□□ -0.19
CSDE1-215ENST00000533818 HSP90B1P14625 803 aaKnown RBP13.86□□□□□ -0.19
CSDE1-215ENST00000533818 FOSL2P15408 326 aa13.86□□□□□ -0.19
CSDE1-215ENST00000533818 FLT3LGP49771 235 aa13.86□□□□□ -0.19
CSDE1-215ENST00000533818 TXNRD3Q86VQ6 643 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 88.2 ms