RNA–Protein interactions for RNA: ENST00000533774.5

SVIP-205, Transcript of small VCP interacting protein, humanhuman

TSL 3

Gene SVIP, Length 829 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SVIP-205ENST00000533774 TMEM106CQ9BVX2 250 aa15.97■□□□□ 0.15
SVIP-205ENST00000533774 GREM2Q9H772 168 aa15.97■□□□□ 0.15
SVIP-205ENST00000533774 BSDC1Q9NW68 430 aaPredicted RBP15.97■□□□□ 0.15
SVIP-205ENST00000533774 TESPA1A2RU30 521 aaPredicted RBP15.96■□□□□ 0.15
SVIP-205ENST00000533774 USP2O75604 605 aaPredicted RBP15.96■□□□□ 0.15
SVIP-205ENST00000533774 MYCP01106 439 aaPredicted RBP15.96■□□□□ 0.15
SVIP-205ENST00000533774 CTSWP56202 376 aa15.96■□□□□ 0.15
SVIP-205ENST00000533774 GTF2IP78347 998 aa15.96■□□□□ 0.15
SVIP-205ENST00000533774 NBPF12Q5TAG4 269 aaPredicted RBP15.96■□□□□ 0.15
SVIP-205ENST00000533774 TTLL11Q8NHH1 800 aa15.96■□□□□ 0.15
SVIP-205ENST00000533774 CWC25Q9NXE8 425 aaPredicted RBP15.96■□□□□ 0.15
SVIP-205ENST00000533774 HSP90B1P14625 803 aaKnown RBP15.95■□□□□ 0.14
SVIP-205ENST00000533774 GOLGA2Q08379 1002 aa15.95■□□□□ 0.14
SVIP-205ENST00000533774 CHRDL2Q6WN34 429 aa15.95■□□□□ 0.14
SVIP-205ENST00000533774 A0A0C4DFX4 3053 aa15.95■□□□□ 0.14
SVIP-205ENST00000533774 CLRN2A0PK11 232 aa15.94■□□□□ 0.14
SVIP-205ENST00000533774 DLL1O00548 723 aa15.94■□□□□ 0.14
SVIP-205ENST00000533774 MMP14P50281 582 aa15.94■□□□□ 0.14
SVIP-205ENST00000533774 MS4A4AQ96JQ5 239 aa15.94■□□□□ 0.14
SVIP-205ENST00000533774 CDC5LQ99459 802 aaKnown RBP15.94■□□□□ 0.14
SVIP-205ENST00000533774 METTL22Q9BUU2 404 aaPredicted RBP15.94■□□□□ 0.14
SVIP-205ENST00000533774 RBM27Q9P2N5 1060 aaKnown RBP15.94■□□□□ 0.14
SVIP-205ENST00000533774 PPP1R12BO60237 982 aaPredicted RBP15.93■□□□□ 0.14
SVIP-205ENST00000533774 MKRN4PQ13434 485 aaPredicted RBP15.93■□□□□ 0.14
SVIP-205ENST00000533774 DLGAP5Q15398 846 aa15.93■□□□□ 0.14
SVIP-205ENST00000533774 SLC4A8Q2Y0W8 1093 aa15.93■□□□□ 0.14
SVIP-205ENST00000533774 SLC9C1Q4G0N8 1177 aa15.93■□□□□ 0.14
SVIP-205ENST00000533774 MTMR14Q8NCE2 650 aa15.93■□□□□ 0.14
SVIP-205ENST00000533774 MBIPQ9NS73 344 aa15.93■□□□□ 0.14
SVIP-205ENST00000533774 ZNF804BA4D1E1 1349 aa15.93■□□□□ 0.14
SVIP-205ENST00000533774 IRS2Q9Y4H2 1338 aa15.93■□□□□ 0.14
SVIP-205ENST00000533774 SNAP23O00161 211 aa15.92■□□□□ 0.14
SVIP-205ENST00000533774 IGKV5-2P06315 115 aa15.92■□□□□ 0.14
SVIP-205ENST00000533774 OTUD7BQ6GQQ9 843 aa15.92■□□□□ 0.14
SVIP-205ENST00000533774 SH3TC2Q8TF17 1288 aa15.92■□□□□ 0.14
SVIP-205ENST00000533774 BRI3BPQ8WY22 251 aa15.92■□□□□ 0.14
SVIP-205ENST00000533774 PRMT6Q96LA8 375 aaPredicted RBP15.92■□□□□ 0.14
SVIP-205ENST00000533774 ARHGAP39Q9C0H5 1083 aa15.92■□□□□ 0.14
SVIP-205ENST00000533774 ELP3Q9H9T3 547 aa15.92■□□□□ 0.14
SVIP-205ENST00000533774 LEMD3Q9Y2U8 911 aa15.92■□□□□ 0.14
SVIP-205ENST00000533774 CUL9Q8IWT3 2517 aa15.92■□□□□ 0.14
SVIP-205ENST00000533774 ARAP2Q8WZ64 1704 aa15.91■□□□□ 0.14
SVIP-205ENST00000533774 UNCXA6NJT0 531 aa15.91■□□□□ 0.14
SVIP-205ENST00000533774 ELL2O00472 640 aaPredicted RBP15.91■□□□□ 0.14
SVIP-205ENST00000533774 CDAN1Q8IWY9 1227 aa15.91■□□□□ 0.14
SVIP-205ENST00000533774 OPTNQ96CV9 577 aa15.91■□□□□ 0.14
SVIP-205ENST00000533774 SHISA4Q96DD7 197 aa15.91■□□□□ 0.14
SVIP-205ENST00000533774 CD209Q9NNX6 404 aa15.91■□□□□ 0.14
SVIP-205ENST00000533774 PPP2R3BQ9Y5P8 575 aa15.91■□□□□ 0.14
SVIP-205ENST00000533774 SPDYE2BA6NHP3 402 aa15.9■□□□□ 0.14
SVIP-205ENST00000533774 F8W031 263 aaPredicted RBP15.9■□□□□ 0.14
SVIP-205ENST00000533774 SPDYE6P0CI01 402 aa15.9■□□□□ 0.14
SVIP-205ENST00000533774 IREB2P48200 963 aaKnown RBP15.9■□□□□ 0.14
SVIP-205ENST00000533774 CFAP100Q494V2 611 aa15.9■□□□□ 0.14
SVIP-205ENST00000533774 NBPF11Q86T75 865 aa15.9■□□□□ 0.14
SVIP-205ENST00000533774 PRO3102Q9H379 93 aa15.9■□□□□ 0.14
SVIP-205ENST00000533774 ZNF853P0CG23 659 aa15.89■□□□□ 0.13
SVIP-205ENST00000533774 RASA3Q14644 834 aa15.89■□□□□ 0.13
SVIP-205ENST00000533774 TAF1CQ15572 869 aaPredicted RBP15.89■□□□□ 0.13
SVIP-205ENST00000533774 SUPT20HL1Q3ZLR7 823 aa15.89■□□□□ 0.13
SVIP-205ENST00000533774 PPP1R3FQ6ZSY5 799 aaPredicted RBP15.89■□□□□ 0.13
SVIP-205ENST00000533774 ANKRD13AQ8IZ07 590 aa15.89■□□□□ 0.13
SVIP-205ENST00000533774 FAM43AQ8N2R8 423 aa15.89■□□□□ 0.13
SVIP-205ENST00000533774 SLC17A8Q8NDX2 589 aa15.89■□□□□ 0.13
SVIP-205ENST00000533774 VEZTQ9HBM0 779 aa15.89■□□□□ 0.13
SVIP-205ENST00000533774 MAP3K2Q9Y2U5 619 aa15.89■□□□□ 0.13
SVIP-205ENST00000533774 ALPK3Q96L96 1907 aa15.89■□□□□ 0.13
SVIP-205ENST00000533774 MTFR1Q15390 333 aa15.88■□□□□ 0.13
SVIP-205ENST00000533774 MGAMO43451 1857 aa15.87■□□□□ 0.13
SVIP-205ENST00000533774 CCL15-CCL14A0A0B4J2E2 113 aa15.87■□□□□ 0.13
SVIP-205ENST00000533774 CCL15Q16663 113 aa15.87■□□□□ 0.13
SVIP-205ENST00000533774 CWF19L2Q2TBE0 894 aaKnown RBP15.87■□□□□ 0.13
SVIP-205ENST00000533774 C8orf58Q8NAV2 365 aa15.87■□□□□ 0.13
SVIP-205ENST00000533774 JAG2Q9Y219 1238 aa15.87■□□□□ 0.13
SVIP-205ENST00000533774 CTGFP29279 349 aa15.86■□□□□ 0.13
SVIP-205ENST00000533774 CHRNDQ07001 517 aa15.86■□□□□ 0.13
SVIP-205ENST00000533774 RUNDC1Q96C34 613 aa15.86■□□□□ 0.13
SVIP-205ENST00000533774 TEPSINQ96N21 525 aa15.86■□□□□ 0.13
SVIP-205ENST00000533774 ZFYVE28Q9HCC9 887 aa15.86■□□□□ 0.13
SVIP-205ENST00000533774 LAMA3Q16787 3333 aa15.86■□□□□ 0.13
SVIP-205ENST00000533774 PI4KAP2A4QPH2 592 aa15.85■□□□□ 0.13
SVIP-205ENST00000533774 H7C1W4 665 aa15.85■□□□□ 0.13
SVIP-205ENST00000533774 SOX1O00570 391 aaPredicted RBP15.85■□□□□ 0.13
SVIP-205ENST00000533774 TAF5LO75529 589 aa15.85■□□□□ 0.13
SVIP-205ENST00000533774 ITGA6P23229 1130 aa15.85■□□□□ 0.13
SVIP-205ENST00000533774 IGHMBP2P38935 993 aaKnown RBP15.85■□□□□ 0.13
SVIP-205ENST00000533774 UBE2Q1Q7Z7E8 422 aa15.85■□□□□ 0.13
SVIP-205ENST00000533774 PI4KAP1Q8N8J0 262 aa15.85■□□□□ 0.13
SVIP-205ENST00000533774 HELBQ8NG08 1087 aaPredicted RBP15.85■□□□□ 0.13
SVIP-205ENST00000533774 DPF3Q92784 378 aa15.85■□□□□ 0.13
SVIP-205ENST00000533774 ANKRD2Q9GZV1 360 aa15.85■□□□□ 0.13
SVIP-205ENST00000533774 ECM2O94769 699 aaPredicted RBP15.84■□□□□ 0.13
SVIP-205ENST00000533774 LACTBP83111 547 aaPredicted RBP15.84■□□□□ 0.13
SVIP-205ENST00000533774 VGLL4Q14135 290 aa15.84■□□□□ 0.13
SVIP-205ENST00000533774 KSR2Q6VAB6 950 aa15.84■□□□□ 0.13
SVIP-205ENST00000533774 UBE3BQ7Z3V4 1068 aa15.84■□□□□ 0.13
SVIP-205ENST00000533774 NEURL1BA8MQ27 555 aa15.83■□□□□ 0.12
SVIP-205ENST00000533774 MYO1BO43795 1136 aa15.83■□□□□ 0.12
SVIP-205ENST00000533774 IL1R1P14778 569 aa15.83■□□□□ 0.12
SVIP-205ENST00000533774 CASP7P55210 303 aa15.83■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms