RNA–Protein interactions for RNA: ENST00000533390.5

AP004608.1-202, humanhuman

TSL 1 (best) BASIC

Gene AP004608.1, Length 1,863 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP004608.1-202ENST00000533390 HMGB1P09429 215 aaKnown RBP26■■□□□ 1.75
AP004608.1-202ENST00000533390 TFCP2L1Q9NZI6 479 aa26■■□□□ 1.75
AP004608.1-202ENST00000533390 WWC3Q9ULE0 1092 aa26■■□□□ 1.75
AP004608.1-202ENST00000533390 GYG1P46976 350 aa25.99■■□□□ 1.75
AP004608.1-202ENST00000533390 GRAPQ13588 217 aa25.98■■□□□ 1.75
AP004608.1-202ENST00000533390 GRAPLQ8TC17 118 aaPredicted RBP25.98■■□□□ 1.75
AP004608.1-202ENST00000533390 EP400Q96L91 3159 aa25.98■■□□□ 1.75
AP004608.1-202ENST00000533390 RPGRQ92834 1020 aaKnown RBP25.98■■□□□ 1.75
AP004608.1-202ENST00000533390 MYH13Q9UKX3 1938 aa25.97■■□□□ 1.75
AP004608.1-202ENST00000533390 IMMTQ16891 758 aaKnown RBP25.97■■□□□ 1.75
AP004608.1-202ENST00000533390 TCRBV5S4A2TA0A5A2 114 aa25.96■■□□□ 1.75
AP004608.1-202ENST00000533390 MAGEB6Q8N7X4 407 aa25.96■■□□□ 1.75
AP004608.1-202ENST00000533390 TCEANC2Q96MN5 208 aa25.96■■□□□ 1.75
AP004608.1-202ENST00000533390 AIDAQ96BJ3 306 aa25.96■■□□□ 1.75
AP004608.1-202ENST00000533390 LRP2BPQ9P2M1 347 aa25.96■■□□□ 1.75
AP004608.1-202ENST00000533390 DENND2AQ9ULE3 1009 aa25.96■■□□□ 1.75
AP004608.1-202ENST00000533390 LARGE1O95461 756 aa25.95■■□□□ 1.74
AP004608.1-202ENST00000533390 PKP1Q13835 747 aa25.95■■□□□ 1.74
AP004608.1-202ENST00000533390 CLEC17AQ6ZS10 378 aa25.95■■□□□ 1.74
AP004608.1-202ENST00000533390 STOX1Q6ZVD7 989 aa25.95■■□□□ 1.74
AP004608.1-202ENST00000533390 FAM84BQ96KN1 310 aaPredicted RBP25.95■■□□□ 1.74
AP004608.1-202ENST00000533390 IQSEC3Q9UPP2 1182 aaPredicted RBP25.95■■□□□ 1.74
AP004608.1-202ENST00000533390 TNS1Q9HBL0 1735 aaKnown RBP25.94■■□□□ 1.74
AP004608.1-202ENST00000533390 E7EWF7 191 aa25.94■■□□□ 1.74
AP004608.1-202ENST00000533390 FGAP02671 866 aa25.94■■□□□ 1.74
AP004608.1-202ENST00000533390 PTMSP20962 102 aa25.94■■□□□ 1.74
AP004608.1-202ENST00000533390 ZNF827Q17R98 1081 aa25.94■■□□□ 1.74
AP004608.1-202ENST00000533390 CCDC83Q8IWF9 413 aa25.94■■□□□ 1.74
AP004608.1-202ENST00000533390 FLAD1Q8NFF5 587 aa25.94■■□□□ 1.74
AP004608.1-202ENST00000533390 AKT1S1Q96B36 256 aa25.94■■□□□ 1.74
AP004608.1-202ENST00000533390 TPCN1Q9ULQ1 816 aa25.94■■□□□ 1.74
AP004608.1-202ENST00000533390 SMC3Q9UQE7 1217 aa25.94■■□□□ 1.74
AP004608.1-202ENST00000533390 GOLGA6L22H0YM25 854 aa25.94■■□□□ 1.74
AP004608.1-202ENST00000533390 SEMA3EO15041 775 aa25.94■■□□□ 1.74
AP004608.1-202ENST00000533390 FOXP2O15409 715 aa25.94■■□□□ 1.74
AP004608.1-202ENST00000533390 COL9A3Q14050 684 aaPredicted RBP25.94■■□□□ 1.74
AP004608.1-202ENST00000533390 TOB2Q14106 344 aaPredicted RBP25.94■■□□□ 1.74
AP004608.1-202ENST00000533390 ME3Q16798 604 aa25.94■■□□□ 1.74
AP004608.1-202ENST00000533390 TTLL5Q6EMB2 1281 aa25.94■■□□□ 1.74
AP004608.1-202ENST00000533390 WTIPA6NIX2 430 aaPredicted RBP25.93■■□□□ 1.74
AP004608.1-202ENST00000533390 POLRMTO00411 1230 aaKnown RBP25.93■■□□□ 1.74
AP004608.1-202ENST00000533390 DHX32Q7L7V1 743 aaKnown RBP25.93■■□□□ 1.74
AP004608.1-202ENST00000533390 RGPD3A6NKT7 1758 aaPredicted RBP25.93■■□□□ 1.74
AP004608.1-202ENST00000533390 RGPD4Q7Z3J3 1758 aa25.93■■□□□ 1.74
AP004608.1-202ENST00000533390 FGD1P98174 961 aa25.92■■□□□ 1.74
AP004608.1-202ENST00000533390 DDR1Q08345 913 aa25.92■■□□□ 1.74
AP004608.1-202ENST00000533390 Q6ZUG5 572 aa25.92■■□□□ 1.74
AP004608.1-202ENST00000533390 FBXO33Q7Z6M2 555 aa25.92■■□□□ 1.74
AP004608.1-202ENST00000533390 RBM17Q96I25 401 aaKnown RBP25.92■■□□□ 1.74
AP004608.1-202ENST00000533390 CRY2Q49AN0 593 aa25.91■■□□□ 1.74
AP004608.1-202ENST00000533390 NLGN1Q8N2Q7 840 aa25.91■■□□□ 1.74
AP004608.1-202ENST00000533390 ABCF2Q9UG63 623 aa25.91■■□□□ 1.74
AP004608.1-202ENST00000533390 ZNF213O14771 459 aa25.91■■□□□ 1.74
AP004608.1-202ENST00000533390 BAG4O95429 457 aaKnown RBP25.91■■□□□ 1.74
AP004608.1-202ENST00000533390 APPP05067 770 aa25.91■■□□□ 1.74
AP004608.1-202ENST00000533390 HIBADHP31937 336 aaKnown RBP25.91■■□□□ 1.74
AP004608.1-202ENST00000533390 ANKIB1Q9P2G1 1089 aa25.91■■□□□ 1.74
AP004608.1-202ENST00000533390 A0A0G2JLW4 131 aa25.9■■□□□ 1.74
AP004608.1-202ENST00000533390 COL23A1Q86Y22 540 aaPredicted RBP25.9■■□□□ 1.74
AP004608.1-202ENST00000533390 STRBPQ96SI9 672 aaKnown RBP25.9■■□□□ 1.74
AP004608.1-202ENST00000533390 ZDHHC9Q9Y397 364 aa25.9■■□□□ 1.74
AP004608.1-202ENST00000533390 BRD1O95696 1058 aa25.89■■□□□ 1.74
AP004608.1-202ENST00000533390 LEMD3Q9Y2U8 911 aa25.89■■□□□ 1.74
AP004608.1-202ENST00000533390 HAND2P61296 217 aa25.89■■□□□ 1.73
AP004608.1-202ENST00000533390 RAI14Q9P0K7 980 aa25.89■■□□□ 1.73
AP004608.1-202ENST00000533390 COL1A1P02452 1464 aaPredicted RBP25.89■■□□□ 1.73
AP004608.1-202ENST00000533390 XDHP47989 1333 aa25.89■■□□□ 1.73
AP004608.1-202ENST00000533390 MBD4O95243 580 aa25.88■■□□□ 1.73
AP004608.1-202ENST00000533390 KLRK1P26718 216 aa25.88■■□□□ 1.73
AP004608.1-202ENST00000533390 RGS17Q9UGC6 210 aaPredicted RBP25.88■■□□□ 1.73
AP004608.1-202ENST00000533390 PDS5AQ29RF7 1337 aaKnown RBP25.88■■□□□ 1.73
AP004608.1-202ENST00000533390 GNAT2P19087 354 aa25.87■■□□□ 1.73
AP004608.1-202ENST00000533390 NECAB1Q8N987 351 aa25.87■■□□□ 1.73
AP004608.1-202ENST00000533390 WDR33Q9C0J8 1336 aaKnown RBP25.87■■□□□ 1.73
AP004608.1-202ENST00000533390 PATL2C9JE40 543 aaKnown RBP25.87■■□□□ 1.73
AP004608.1-202ENST00000533390 EXOSC10Q01780 885 aaKnown RBP25.87■■□□□ 1.73
AP004608.1-202ENST00000533390 CYP7A1P22680 504 aa25.86■■□□□ 1.73
AP004608.1-202ENST00000533390 GJB2P29033 226 aa25.86■■□□□ 1.73
AP004608.1-202ENST00000533390 POTEAQ6S8J7 498 aa25.86■■□□□ 1.73
AP004608.1-202ENST00000533390 BRF1Q92994 677 aa25.86■■□□□ 1.73
AP004608.1-202ENST00000533390 ARMT1Q9H993 441 aa25.86■■□□□ 1.73
AP004608.1-202ENST00000533390 ZMYM6O95789 1325 aa25.86■■□□□ 1.73
AP004608.1-202ENST00000533390 TRAK2O60296 914 aa25.85■■□□□ 1.73
AP004608.1-202ENST00000533390 ST3GAL1Q11201 340 aa25.85■■□□□ 1.73
AP004608.1-202ENST00000533390 ALX1Q15699 326 aa25.85■■□□□ 1.73
AP004608.1-202ENST00000533390 NCOA7Q8NI08 942 aa25.85■■□□□ 1.73
AP004608.1-202ENST00000533390 PNPLA7Q6ZV29 1317 aa25.85■■□□□ 1.73
AP004608.1-202ENST00000533390 FOXD4L5Q5VV16 416 aaPredicted RBP25.85■■□□□ 1.73
AP004608.1-202ENST00000533390 RALYLQ86SE5 291 aaKnown RBP25.85■■□□□ 1.73
AP004608.1-202ENST00000533390 FOXD4L4Q8WXT5 416 aaPredicted RBP25.85■■□□□ 1.73
AP004608.1-202ENST00000533390 LRRC2Q9BYS8 371 aa25.85■■□□□ 1.73
AP004608.1-202ENST00000533390 NRXN2Q9P2S2 1712 aa25.84■■□□□ 1.73
AP004608.1-202ENST00000533390 BBOX1O75936 387 aa25.84■■□□□ 1.73
AP004608.1-202ENST00000533390 HOXA10P31260 410 aaPredicted RBP25.84■■□□□ 1.73
AP004608.1-202ENST00000533390 STK3Q13188 491 aa25.84■■□□□ 1.73
AP004608.1-202ENST00000533390 GSE1Q14687 1217 aa25.84■■□□□ 1.73
AP004608.1-202ENST00000533390 NAPBQ9H115 298 aa25.84■■□□□ 1.73
AP004608.1-202ENST00000533390 CCDC88AQ3V6T2 1871 aa25.83■■□□□ 1.73
AP004608.1-202ENST00000533390 ZBTB22O15209 634 aa25.83■■□□□ 1.73
AP004608.1-202ENST00000533390 TRDNQ13061 729 aa25.83■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 78.2 ms