RNA–Protein interactions for RNA: ENST00000533333.5

PAX6-228, Transcript of paired box 6, humanhuman

TSL 2

Gene PAX6, Length 6,173 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX6-228ENST00000533333 ATP6V1AP38606 617 aa19.91■□□□□ 0.78
PAX6-228ENST00000533333 GABPB2Q8TAK5 448 aaPredicted RBP19.91■□□□□ 0.78
PAX6-228ENST00000533333 LACTBP83111 547 aaPredicted RBP19.9■□□□□ 0.78
PAX6-228ENST00000533333 CLSTN2Q9H4D0 955 aa19.9■□□□□ 0.78
PAX6-228ENST00000533333 LRPPRCP42704 1394 aaKnown RBP19.9■□□□□ 0.78
PAX6-228ENST00000533333 PTPRCP08575 1304 aa19.9■□□□□ 0.78
PAX6-228ENST00000533333 ITIH3Q06033 890 aa19.9■□□□□ 0.78
PAX6-228ENST00000533333 NME9Q86XW9 330 aa19.9■□□□□ 0.78
PAX6-228ENST00000533333 AOPEPQ8N6M6 819 aa19.9■□□□□ 0.78
PAX6-228ENST00000533333 GPR161Q8N6U8 529 aaKnown RBP19.9■□□□□ 0.78
PAX6-228ENST00000533333 SBNO2Q9Y2G9 1366 aa19.9■□□□□ 0.78
PAX6-228ENST00000533333 SBDSQ9Y3A5 250 aaKnown RBP eCLIP19.9■□□□□ 0.78
PAX6-228ENST00000533333 STK10O94804 968 aaKnown RBP19.9■□□□□ 0.78
PAX6-228ENST00000533333 TSHZ3Q63HK5 1081 aa19.9■□□□□ 0.78
PAX6-228ENST00000533333 MRPS27Q92552 414 aaKnown RBP19.9■□□□□ 0.78
PAX6-228ENST00000533333 CSRNP2Q9H175 543 aa19.9■□□□□ 0.78
PAX6-228ENST00000533333 SYT1P21579 422 aa19.89■□□□□ 0.78
PAX6-228ENST00000533333 KIFAP3Q92845 792 aa19.89■□□□□ 0.78
PAX6-228ENST00000533333 FRMD4BQ9Y2L6 1034 aa19.89■□□□□ 0.78
PAX6-228ENST00000533333 NEDD9Q14511 834 aa19.89■□□□□ 0.77
PAX6-228ENST00000533333 SDCCAG8Q86SQ7 713 aaPredicted RBP19.89■□□□□ 0.77
PAX6-228ENST00000533333 RAB3IPQ96QF0 476 aaPredicted RBP19.89■□□□□ 0.77
PAX6-228ENST00000533333 WDR46O15213 610 aaKnown RBP19.89■□□□□ 0.77
PAX6-228ENST00000533333 KRT2P35908 639 aa19.89■□□□□ 0.77
PAX6-228ENST00000533333 TNNC1P63316 161 aa19.89■□□□□ 0.77
PAX6-228ENST00000533333 POLA1P09884 1462 aaPredicted RBP19.89■□□□□ 0.77
PAX6-228ENST00000533333 CAPN2P17655 700 aa19.89■□□□□ 0.77
PAX6-228ENST00000533333 GBP7Q8N8V2 638 aaPredicted RBP19.89■□□□□ 0.77
PAX6-228ENST00000533333 PARP3Q9Y6F1 533 aa19.89■□□□□ 0.77
PAX6-228ENST00000533333 BRDTQ58F21 947 aaPredicted RBP19.88■□□□□ 0.77
PAX6-228ENST00000533333 SPOUT1Q5T280 376 aaKnown RBP19.88■□□□□ 0.77
PAX6-228ENST00000533333 KRT28Q7Z3Y7 464 aa19.88■□□□□ 0.77
PAX6-228ENST00000533333 NOC2LQ9Y3T9 749 aaKnown RBP19.88■□□□□ 0.77
PAX6-228ENST00000533333 RIMBP2O15034 1052 aa19.88■□□□□ 0.77
PAX6-228ENST00000533333 HCLS1P14317 486 aaPredicted RBP19.88■□□□□ 0.77
PAX6-228ENST00000533333 FYB2Q5VWT5 728 aa19.88■□□□□ 0.77
PAX6-228ENST00000533333 GKAP1Q5VSY0 366 aaPredicted RBP19.88■□□□□ 0.77
PAX6-228ENST00000533333 TRIM75PA6NK02 468 aa19.88■□□□□ 0.77
PAX6-228ENST00000533333 SNRPA1P09661 255 aaKnown RBP19.88■□□□□ 0.77
PAX6-228ENST00000533333 PLIN2Q99541 437 aa19.88■□□□□ 0.77
PAX6-228ENST00000533333 VCX3BQ9H321 246 aa19.88■□□□□ 0.77
PAX6-228ENST00000533333 SWAP70Q9UH65 585 aa19.88■□□□□ 0.77
PAX6-228ENST00000533333 ZC3H12CQ9C0D7 883 aaKnown RBP19.88■□□□□ 0.77
PAX6-228ENST00000533333 ANKFY1Q9P2R3 1169 aa19.88■□□□□ 0.77
PAX6-228ENST00000533333 EBAG9O00559 213 aa19.87■□□□□ 0.77
PAX6-228ENST00000533333 RAPGEF3O95398 923 aa19.87■□□□□ 0.77
PAX6-228ENST00000533333 NSMCE1Q8WV22 266 aa19.87■□□□□ 0.77
PAX6-228ENST00000533333 CALML3P27482 149 aa19.87■□□□□ 0.77
PAX6-228ENST00000533333 ARID4AP29374 1257 aaPredicted RBP19.87■□□□□ 0.77
PAX6-228ENST00000533333 ATP5DP30049 168 aa19.87■□□□□ 0.77
PAX6-228ENST00000533333 TRPC3Q13507 836 aa19.87■□□□□ 0.77
PAX6-228ENST00000533333 TRIM6Q9C030 488 aaPredicted RBP19.87■□□□□ 0.77
PAX6-228ENST00000533333 VPS18Q9P253 973 aa19.87■□□□□ 0.77
PAX6-228ENST00000533333 RTL9Q8NET4 1388 aa19.87■□□□□ 0.77
PAX6-228ENST00000533333 VIMP08670 466 aaKnown RBP19.87■□□□□ 0.77
PAX6-228ENST00000533333 VAV2P52735 878 aa19.87■□□□□ 0.77
PAX6-228ENST00000533333 STX17P56962 302 aa19.87■□□□□ 0.77
PAX6-228ENST00000533333 KARSQ15046 597 aaKnown RBP19.87■□□□□ 0.77
PAX6-228ENST00000533333 EP400NLQ6ZTU2 488 aa19.87■□□□□ 0.77
PAX6-228ENST00000533333 ZNF408Q9H9D4 720 aa19.87■□□□□ 0.77
PAX6-228ENST00000533333 FAM160A1Q05DH4 1040 aa19.87■□□□□ 0.77
PAX6-228ENST00000533333 ZNF830Q96NB3 372 aaPredicted RBP19.87■□□□□ 0.77
PAX6-228ENST00000533333 SPOPO43791 374 aa19.86■□□□□ 0.77
PAX6-228ENST00000533333 ZSCAN22P10073 491 aaPredicted RBP19.86■□□□□ 0.77
PAX6-228ENST00000533333 FMNL3Q8IVF7 1028 aa19.86■□□□□ 0.77
PAX6-228ENST00000533333 BEGAINQ9BUH8 593 aa19.86■□□□□ 0.77
PAX6-228ENST00000533333 GINS2Q9Y248 185 aa19.86■□□□□ 0.77
PAX6-228ENST00000533333 PI4KAP2A4QPH2 592 aa19.86■□□□□ 0.77
PAX6-228ENST00000533333 RPL13P26373 211 aaKnown RBP19.86■□□□□ 0.77
PAX6-228ENST00000533333 CCDC125Q86Z20 511 aa19.86■□□□□ 0.77
PAX6-228ENST00000533333 ARFGAP2Q8N6H7 521 aa19.86■□□□□ 0.77
PAX6-228ENST00000533333 PI4KAP1Q8N8J0 262 aa19.86■□□□□ 0.77
PAX6-228ENST00000533333 NCAPGQ9BPX3 1015 aa19.86■□□□□ 0.77
PAX6-228ENST00000533333 GJA3Q9Y6H8 435 aa19.86■□□□□ 0.77
PAX6-228ENST00000533333 CCDC169A6NNP5 214 aa19.85■□□□□ 0.77
PAX6-228ENST00000533333 MCM9Q9NXL9 1143 aa19.85■□□□□ 0.77
PAX6-228ENST00000533333 ZNF569Q5MCW4 686 aa19.85■□□□□ 0.77
PAX6-228ENST00000533333 RHOXF2BP0C7M4 288 aa19.85■□□□□ 0.77
PAX6-228ENST00000533333 Q6ZUG5 572 aa19.85■□□□□ 0.77
PAX6-228ENST00000533333 RHOXF2Q9BQY4 288 aa19.85■□□□□ 0.77
PAX6-228ENST00000533333 EMILIN1Q9Y6C2 1016 aa19.85■□□□□ 0.77
PAX6-228ENST00000533333 SYNJ2O15056 1496 aa19.85■□□□□ 0.77
PAX6-228ENST00000533333 RARSP54136 660 aaKnown RBP19.85■□□□□ 0.77
PAX6-228ENST00000533333 RSRC1Q96IZ7 334 aaKnown RBP19.85■□□□□ 0.77
PAX6-228ENST00000533333 EPB41P11171 864 aaKnown RBP19.85■□□□□ 0.77
PAX6-228ENST00000533333 SLC9C2Q5TAH2 1124 aa19.85■□□□□ 0.77
PAX6-228ENST00000533333 ANKRD13DQ6ZTN6 518 aa19.85■□□□□ 0.77
PAX6-228ENST00000533333 DACT3Q96B18 629 aaPredicted RBP19.85■□□□□ 0.77
PAX6-228ENST00000533333 PRIMPOLQ96LW4 560 aa19.85■□□□□ 0.77
PAX6-228ENST00000533333 NIP7Q9Y221 180 aaKnown RBP eCLIP19.85■□□□□ 0.77
PAX6-228ENST00000533333 CCT6AP40227 531 aaKnown RBP19.84■□□□□ 0.77
PAX6-228ENST00000533333 ATP11AP98196 1134 aa19.84■□□□□ 0.77
PAX6-228ENST00000533333 LZTFL1Q9NQ48 299 aa19.84■□□□□ 0.77
PAX6-228ENST00000533333 PIK3R4Q99570 1358 aa19.84■□□□□ 0.77
PAX6-228ENST00000533333 CCDC170Q8IYT3 715 aa19.84■□□□□ 0.77
PAX6-228ENST00000533333 PLCG2P16885 1265 aa19.84■□□□□ 0.77
PAX6-228ENST00000533333 TBC1D9Q6ZT07 1266 aa19.84■□□□□ 0.77
PAX6-228ENST00000533333 NBPF11Q86T75 865 aa19.84■□□□□ 0.77
PAX6-228ENST00000533333 CACNA2D3Q8IZS8 1091 aa19.84■□□□□ 0.77
PAX6-228ENST00000533333 CCDC26Q8TAB7 109 aa19.84■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms