RNA–Protein interactions for RNA: ENST00000533145.5

HIF3A-215, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 4

Gene HIF3A, Length 573 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-215ENST00000533145 DNAJC2Q99543 621 aaKnown RBP17.11■□□□□ 0.33
HIF3A-215ENST00000533145 RFX7Q2KHR2 1363 aa17.11■□□□□ 0.33
HIF3A-215ENST00000533145 GOLIM4O00461 696 aa17.1■□□□□ 0.33
HIF3A-215ENST00000533145 PI16Q6UXB8 463 aa17.1■□□□□ 0.33
HIF3A-215ENST00000533145 EDC3Q96F86 508 aaKnown RBP17.1■□□□□ 0.33
HIF3A-215ENST00000533145 ANTXR1Q9H6X2 564 aa17.1■□□□□ 0.33
HIF3A-215ENST00000533145 SNRKQ9NRH2 765 aa17.1■□□□□ 0.33
HIF3A-215ENST00000533145 FAM205AQ6ZU69 1335 aa17.1■□□□□ 0.33
HIF3A-215ENST00000533145 SALL1Q9NSC2 1324 aa17.1■□□□□ 0.33
HIF3A-215ENST00000533145 PSME4Q14997 1843 aa17.1■□□□□ 0.33
HIF3A-215ENST00000533145 CCDC88AQ3V6T2 1871 aa17.1■□□□□ 0.33
HIF3A-215ENST00000533145 NFKBIEO00221 500 aa17.09■□□□□ 0.33
HIF3A-215ENST00000533145 HIP1O00291 1037 aa17.09■□□□□ 0.33
HIF3A-215ENST00000533145 CDC45O75419 566 aa17.09■□□□□ 0.33
HIF3A-215ENST00000533145 FRAT2O75474 233 aaPredicted RBP17.09■□□□□ 0.33
HIF3A-215ENST00000533145 C8orf34Q49A92 452 aa17.09■□□□□ 0.33
HIF3A-215ENST00000533145 WDR66Q8TBY9 1149 aa17.09■□□□□ 0.33
HIF3A-215ENST00000533145 TAOK3Q9H2K8 898 aa17.09■□□□□ 0.33
HIF3A-215ENST00000533145 NDUFB9Q9Y6M9 179 aa17.09■□□□□ 0.33
HIF3A-215ENST00000533145 COL1A1P02452 1464 aaPredicted RBP17.09■□□□□ 0.33
HIF3A-215ENST00000533145 PPIP5K2O43314 1243 aa17.08■□□□□ 0.32
HIF3A-215ENST00000533145 AOC3Q16853 763 aa17.08■□□□□ 0.32
HIF3A-215ENST00000533145 LRRFIP1Q32MZ4 808 aaKnown RBP17.08■□□□□ 0.32
HIF3A-215ENST00000533145 IQSEC3Q9UPP2 1182 aaPredicted RBP17.08■□□□□ 0.32
HIF3A-215ENST00000533145 DICER1Q9UPY3 1922 aaKnown RBP17.08■□□□□ 0.32
HIF3A-215ENST00000533145 SBF1O95248 1867 aa17.07■□□□□ 0.32
HIF3A-215ENST00000533145 ZNF646O15015 1829 aaPredicted RBP17.07■□□□□ 0.32
HIF3A-215ENST00000533145 CHMLP26374 656 aa17.07■□□□□ 0.32
HIF3A-215ENST00000533145 IARSP41252 1262 aaKnown RBP17.07■□□□□ 0.32
HIF3A-215ENST00000533145 TMED8Q6PL24 325 aaPredicted RBP17.07■□□□□ 0.32
HIF3A-215ENST00000533145 ZGPATQ8N5A5 531 aaKnown RBP17.07■□□□□ 0.32
HIF3A-215ENST00000533145 FSD1Q9BTV5 496 aa17.07■□□□□ 0.32
HIF3A-215ENST00000533145 WWC3Q9ULE0 1092 aa17.07■□□□□ 0.32
HIF3A-215ENST00000533145 SCN9AQ15858 1988 aa17.07■□□□□ 0.32
HIF3A-215ENST00000533145 G3V3G9 751 aa17.06■□□□□ 0.32
HIF3A-215ENST00000533145 ECE2O60344 883 aa17.06■□□□□ 0.32
HIF3A-215ENST00000533145 ZFYP08048 801 aaPredicted RBP17.06■□□□□ 0.32
HIF3A-215ENST00000533145 FKBP1AP62942 108 aaKnown RBP17.06■□□□□ 0.32
HIF3A-215ENST00000533145 DOK7Q18PE1 504 aa17.06■□□□□ 0.32
HIF3A-215ENST00000533145 DCAF8Q5TAQ9 597 aa17.06■□□□□ 0.32
HIF3A-215ENST00000533145 TBC1D9Q6ZT07 1266 aa17.06■□□□□ 0.32
HIF3A-215ENST00000533145 TBC1D22AQ8WUA7 517 aa17.06■□□□□ 0.32
HIF3A-215ENST00000533145 BACH2Q9BYV9 841 aa17.06■□□□□ 0.32
HIF3A-215ENST00000533145 PIH1D3Q9NQM4 214 aaKnown RBP17.06■□□□□ 0.32
HIF3A-215ENST00000533145 ZNF277Q9NRM2 450 aaPredicted RBP17.06■□□□□ 0.32
HIF3A-215ENST00000533145 EIF5BO60841 1220 aaKnown RBP17.05■□□□□ 0.32
HIF3A-215ENST00000533145 SPTY2D1Q68D10 685 aaPredicted RBP17.05■□□□□ 0.32
HIF3A-215ENST00000533145 ZSCAN25Q6NSZ9 544 aa17.05■□□□□ 0.32
HIF3A-215ENST00000533145 CASC1Q6TDU7 716 aa17.05■□□□□ 0.32
HIF3A-215ENST00000533145 LARGE2Q8N3Y3 721 aa17.05■□□□□ 0.32
HIF3A-215ENST00000533145 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.05■□□□□ 0.32
HIF3A-215ENST00000533145 DBNDD1Q9H9R9 158 aa17.05■□□□□ 0.32
HIF3A-215ENST00000533145 SUGT1Q9Y2Z0 365 aa17.05■□□□□ 0.32
HIF3A-215ENST00000533145 RNF113AO15541 343 aaKnown RBP17.04■□□□□ 0.32
HIF3A-215ENST00000533145 MAP3K12Q12852 859 aa17.04■□□□□ 0.32
HIF3A-215ENST00000533145 CHAF1AQ13111 956 aaPredicted RBP17.04■□□□□ 0.32
HIF3A-215ENST00000533145 STRIP1Q5VSL9 837 aa17.04■□□□□ 0.32
HIF3A-215ENST00000533145 TTLL5Q6EMB2 1281 aa17.04■□□□□ 0.32
HIF3A-215ENST00000533145 ZNF784Q8NCA9 323 aaPredicted RBP17.04■□□□□ 0.32
HIF3A-215ENST00000533145 YDJCA8MPS7 323 aa17.03■□□□□ 0.32
HIF3A-215ENST00000533145 ADD2P35612 726 aa17.03■□□□□ 0.32
HIF3A-215ENST00000533145 GTF2IP78347 998 aa17.03■□□□□ 0.32
HIF3A-215ENST00000533145 UBE3CQ15386 1083 aa17.03■□□□□ 0.32
HIF3A-215ENST00000533145 ERICH6Q7L0X2 663 aa17.03■□□□□ 0.32
HIF3A-215ENST00000533145 RUFY2Q8WXA3 655 aa17.03■□□□□ 0.32
HIF3A-215ENST00000533145 LRP2BPQ9P2M1 347 aa17.03■□□□□ 0.32
HIF3A-215ENST00000533145 COL4A5P29400 1685 aa17.03■□□□□ 0.32
HIF3A-215ENST00000533145 USP17L3A6NCW0 530 aa17.02■□□□□ 0.32
HIF3A-215ENST00000533145 USP17L4A6NCW7 530 aa17.02■□□□□ 0.32
HIF3A-215ENST00000533145 IDH1O75874 414 aaKnown RBP17.02■□□□□ 0.32
HIF3A-215ENST00000533145 YBX3P16989 372 aaKnown RBP eCLIP17.02■□□□□ 0.32
HIF3A-215ENST00000533145 ZMYM1Q5SVZ6 1142 aa17.02■□□□□ 0.32
HIF3A-215ENST00000533145 ARHGAP27Q6ZUM4 889 aa17.02■□□□□ 0.32
HIF3A-215ENST00000533145 USP17L1Q7RTZ2 530 aa17.02■□□□□ 0.32
HIF3A-215ENST00000533145 NIM1KQ8IY84 436 aa17.02■□□□□ 0.32
HIF3A-215ENST00000533145 HELLSQ9NRZ9 838 aa17.02■□□□□ 0.32
HIF3A-215ENST00000533145 DIAPH3Q9NSV4 1193 aa17.02■□□□□ 0.32
HIF3A-215ENST00000533145 ABCF2Q9UG63 623 aa17.02■□□□□ 0.32
HIF3A-215ENST00000533145 ZNRF3Q9ULT6 936 aa17.02■□□□□ 0.32
HIF3A-215ENST00000533145 MAST2Q6P0Q8 1798 aa17.02■□□□□ 0.31
HIF3A-215ENST00000533145 RAD50Q92878 1312 aa17.01■□□□□ 0.31
HIF3A-215ENST00000533145 TCRBV5S4A2TA0A5A2 114 aa17.01■□□□□ 0.31
HIF3A-215ENST00000533145 PDE6AP16499 860 aa17.01■□□□□ 0.31
HIF3A-215ENST00000533145 PRELPP51888 382 aa17.01■□□□□ 0.31
HIF3A-215ENST00000533145 RASSF7Q02833 373 aa17.01■□□□□ 0.31
HIF3A-215ENST00000533145 MFSD14BQ5SR56 506 aa17.01■□□□□ 0.31
HIF3A-215ENST00000533145 DACT2Q5SW24 774 aa17.01■□□□□ 0.31
HIF3A-215ENST00000533145 SLC9C2Q5TAH2 1124 aa17.01■□□□□ 0.31
HIF3A-215ENST00000533145 JDP2Q8WYK2 163 aa17.01■□□□□ 0.31
HIF3A-215ENST00000533145 ESYT1Q9BSJ8 1104 aa17.01■□□□□ 0.31
HIF3A-215ENST00000533145 SGSM2O43147 1006 aa17■□□□□ 0.31
HIF3A-215ENST00000533145 LDHBP07195 334 aaKnown RBP17■□□□□ 0.31
HIF3A-215ENST00000533145 VIL1P09327 827 aaKnown RBP17■□□□□ 0.31
HIF3A-215ENST00000533145 LMNB1P20700 586 aa17■□□□□ 0.31
HIF3A-215ENST00000533145 NMIQ13287 307 aaPredicted RBP17■□□□□ 0.31
HIF3A-215ENST00000533145 CWC27Q6UX04 472 aaKnown RBP17■□□□□ 0.31
HIF3A-215ENST00000533145 APPBP2Q92624 585 aa17■□□□□ 0.31
HIF3A-215ENST00000533145 NSUN4Q96CB9 384 aaKnown RBP17■□□□□ 0.31
HIF3A-215ENST00000533145 MRIQ9BWK5 157 aa17■□□□□ 0.31
HIF3A-215ENST00000533145 KCNQ5Q9NR82 932 aa17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms