RNA–Protein interactions for RNA: ENST00000533048.5

NXF1-214, Transcript of nuclear RNA export factor 1, humanhuman

TSL 5

Gene NXF1, Length 922 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-214ENST00000533048 CHD4Q14839 1912 aa17.94■□□□□ 0.46
NXF1-214ENST00000533048 ZNF646O15015 1829 aaPredicted RBP17.93■□□□□ 0.46
NXF1-214ENST00000533048 HIP1O00291 1037 aa17.93■□□□□ 0.46
NXF1-214ENST00000533048 IGSF3O75054 1194 aa17.93■□□□□ 0.46
NXF1-214ENST00000533048 CHMLP26374 656 aa17.93■□□□□ 0.46
NXF1-214ENST00000533048 FSD1Q9BTV5 496 aa17.93■□□□□ 0.46
NXF1-214ENST00000533048 ANTXR1Q9H6X2 564 aa17.93■□□□□ 0.46
NXF1-214ENST00000533048 SNRKQ9NRH2 765 aa17.93■□□□□ 0.46
NXF1-214ENST00000533048 ZNF219Q9P2Y4 722 aaPredicted RBP17.93■□□□□ 0.46
NXF1-214ENST00000533048 MAST2Q6P0Q8 1798 aa17.93■□□□□ 0.46
NXF1-214ENST00000533048 LTBP3Q9NS15 1303 aa17.93■□□□□ 0.46
NXF1-214ENST00000533048 SALL1Q9NSC2 1324 aa17.93■□□□□ 0.46
NXF1-214ENST00000533048 PSME4Q14997 1843 aa17.93■□□□□ 0.46
NXF1-214ENST00000533048 CASC1Q6TDU7 716 aa17.92■□□□□ 0.46
NXF1-214ENST00000533048 SYT17Q9BSW7 474 aa17.92■□□□□ 0.46
NXF1-214ENST00000533048 PIH1D3Q9NQM4 214 aaKnown RBP17.91■□□□□ 0.46
NXF1-214ENST00000533048 IQSEC3Q9UPP2 1182 aaPredicted RBP17.91■□□□□ 0.46
NXF1-214ENST00000533048 FAM205AQ6ZU69 1335 aa17.91■□□□□ 0.46
NXF1-214ENST00000533048 EIF5BO60841 1220 aaKnown RBP17.9■□□□□ 0.46
NXF1-214ENST00000533048 ZFYP08048 801 aaPredicted RBP17.9■□□□□ 0.46
NXF1-214ENST00000533048 LRRFIP1Q32MZ4 808 aaKnown RBP17.9■□□□□ 0.46
NXF1-214ENST00000533048 TMED8Q6PL24 325 aaPredicted RBP17.9■□□□□ 0.46
NXF1-214ENST00000533048 PODNQ7Z5L7 613 aa17.9■□□□□ 0.46
NXF1-214ENST00000533048 BCS1LQ9Y276 419 aa17.9■□□□□ 0.46
NXF1-214ENST00000533048 RAD50Q92878 1312 aa17.9■□□□□ 0.46
NXF1-214ENST00000533048 SCN9AQ15858 1988 aa17.9■□□□□ 0.46
NXF1-214ENST00000533048 NFKBIEO00221 500 aa17.89■□□□□ 0.45
NXF1-214ENST00000533048 WDR66Q8TBY9 1149 aa17.89■□□□□ 0.45
NXF1-214ENST00000533048 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.89■□□□□ 0.451e-6■■■□□ 15.4
NXF1-214ENST00000533048 COL4A5P29400 1685 aa17.89■□□□□ 0.45
NXF1-214ENST00000533048 RIMBP2O15034 1052 aa17.88■□□□□ 0.45
NXF1-214ENST00000533048 FRAT2O75474 233 aaPredicted RBP17.88■□□□□ 0.45
NXF1-214ENST00000533048 AOC3Q16853 763 aa17.88■□□□□ 0.45
NXF1-214ENST00000533048 ZSCAN25Q6NSZ9 544 aa17.88■□□□□ 0.45
NXF1-214ENST00000533048 ZGPATQ8N5A5 531 aaKnown RBP17.88■□□□□ 0.45
NXF1-214ENST00000533048 ESYT1Q9BSJ8 1104 aa17.88■□□□□ 0.45
NXF1-214ENST00000533048 TAOK3Q9H2K8 898 aa17.88■□□□□ 0.45
NXF1-214ENST00000533048 DIAPH3Q9NSV4 1193 aa17.88■□□□□ 0.45
NXF1-214ENST00000533048 CCDC88AQ3V6T2 1871 aa17.88■□□□□ 0.45
NXF1-214ENST00000533048 RNF113AO15541 343 aaKnown RBP17.87■□□□□ 0.45
NXF1-214ENST00000533048 SGSM2O43147 1006 aa17.87■□□□□ 0.45
NXF1-214ENST00000533048 PPIP5K2O43314 1243 aa17.87■□□□□ 0.45
NXF1-214ENST00000533048 UBE3CQ15386 1083 aa17.87■□□□□ 0.45
NXF1-214ENST00000533048 ZMYM1Q5SVZ6 1142 aa17.87■□□□□ 0.45
NXF1-214ENST00000533048 RUFY2Q8WXA3 655 aa17.87■□□□□ 0.45
NXF1-214ENST00000533048 GOLGB1Q14789 3259 aaKnown RBP17.87■□□□□ 0.45
NXF1-214ENST00000533048 ADD2P35612 726 aa17.86■□□□□ 0.45
NXF1-214ENST00000533048 IARSP41252 1262 aaKnown RBP17.86■□□□□ 0.45
NXF1-214ENST00000533048 MAP3K12Q12852 859 aa17.86■□□□□ 0.45
NXF1-214ENST00000533048 NMIQ13287 307 aaPredicted RBP17.86■□□□□ 0.45
NXF1-214ENST00000533048 TBC1D22AQ8WUA7 517 aa17.86■□□□□ 0.45
NXF1-214ENST00000533048 A0A0D9SFI3 127 aa17.85■□□□□ 0.45
NXF1-214ENST00000533048 TCRBV5S4A2TA0A5A2 114 aa17.85■□□□□ 0.45
NXF1-214ENST00000533048 EPB41L2O43491 1005 aaKnown RBP17.85■□□□□ 0.45
NXF1-214ENST00000533048 ECE2O60344 883 aa17.85■□□□□ 0.45
NXF1-214ENST00000533048 IDH1O75874 414 aaKnown RBP17.85■□□□□ 0.45
NXF1-214ENST00000533048 SEC24BO95487 1268 aa17.85■□□□□ 0.45
NXF1-214ENST00000533048 PDE6AP16499 860 aa17.85■□□□□ 0.45
NXF1-214ENST00000533048 FKBP1AP62942 108 aaKnown RBP17.85■□□□□ 0.45
NXF1-214ENST00000533048 CHAF1AQ13111 956 aaPredicted RBP17.85■□□□□ 0.45
NXF1-214ENST00000533048 DOK7Q18PE1 504 aa17.85■□□□□ 0.45
NXF1-214ENST00000533048 FAM227BQ96M60 508 aa17.85■□□□□ 0.45
NXF1-214ENST00000533048 IL25Q9H293 177 aa17.85■□□□□ 0.45
NXF1-214ENST00000533048 ZNF277Q9NRM2 450 aaPredicted RBP17.85■□□□□ 0.45
NXF1-214ENST00000533048 HELLSQ9NRZ9 838 aa17.85■□□□□ 0.45
NXF1-214ENST00000533048 WWC3Q9ULE0 1092 aa17.85■□□□□ 0.45
NXF1-214ENST00000533048 SUGT1Q9Y2Z0 365 aa17.85■□□□□ 0.45
NXF1-214ENST00000533048 SLC9C2Q5TAH2 1124 aa17.84■□□□□ 0.45
NXF1-214ENST00000533048 SPTY2D1Q68D10 685 aaPredicted RBP17.84■□□□□ 0.45
NXF1-214ENST00000533048 CWC27Q6UX04 472 aaKnown RBP17.84■□□□□ 0.45
NXF1-214ENST00000533048 APPBP2Q92624 585 aa17.84■□□□□ 0.45
NXF1-214ENST00000533048 DBNDD1Q9H9R9 158 aa17.84■□□□□ 0.45
NXF1-214ENST00000533048 LRP2BPQ9P2M1 347 aa17.84■□□□□ 0.45
NXF1-214ENST00000533048 DICER1Q9UPY3 1922 aaKnown RBP17.84■□□□□ 0.45
NXF1-214ENST00000533048 REC8O95072 547 aa17.83■□□□□ 0.44
NXF1-214ENST00000533048 STRIP1Q5VSL9 837 aa17.83■□□□□ 0.44
NXF1-214ENST00000533048 LARGE2Q8N3Y3 721 aa17.83■□□□□ 0.44
NXF1-214ENST00000533048 ABCF2Q9UG63 623 aa17.83■□□□□ 0.44
NXF1-214ENST00000533048 SBF1O95248 1867 aa17.82■□□□□ 0.44
NXF1-214ENST00000533048 MAST3O60307 1309 aa17.82■□□□□ 0.44
NXF1-214ENST00000533048 YDJCA8MPS7 323 aa17.82■□□□□ 0.44
NXF1-214ENST00000533048 G3V3G9 751 aa17.82■□□□□ 0.44
NXF1-214ENST00000533048 CHGBP05060 677 aa17.82■□□□□ 0.44
NXF1-214ENST00000533048 PRDX5P30044 214 aa17.82■□□□□ 0.44
NXF1-214ENST00000533048 GTF2IP78347 998 aa17.82■□□□□ 0.44
NXF1-214ENST00000533048 MCMDC2Q4G0Z9 681 aa17.82■□□□□ 0.44
NXF1-214ENST00000533048 MFSD14BQ5SR56 506 aa17.82■□□□□ 0.44
NXF1-214ENST00000533048 DCAF8Q5TAQ9 597 aa17.82■□□□□ 0.44
NXF1-214ENST00000533048 ERICH6Q7L0X2 663 aa17.82■□□□□ 0.44
NXF1-214ENST00000533048 ZNF384Q8TF68 577 aa17.82■□□□□ 0.44
NXF1-214ENST00000533048 NSUN4Q96CB9 384 aaKnown RBP17.82■□□□□ 0.44
NXF1-214ENST00000533048 ZNF532Q9HCE3 1301 aa17.81■□□□□ 0.44
NXF1-214ENST00000533048 USP17L3A6NCW0 530 aa17.81■□□□□ 0.44
NXF1-214ENST00000533048 USP17L4A6NCW7 530 aa17.81■□□□□ 0.44
NXF1-214ENST00000533048 LDHBP07195 334 aaKnown RBP17.81■□□□□ 0.44
NXF1-214ENST00000533048 MECOMQ03112 1051 aa17.81■□□□□ 0.44
NXF1-214ENST00000533048 DACT2Q5SW24 774 aa17.81■□□□□ 0.44
NXF1-214ENST00000533048 TTLL5Q6EMB2 1281 aa17.81■□□□□ 0.44
NXF1-214ENST00000533048 USP17L1Q7RTZ2 530 aa17.81■□□□□ 0.44
NXF1-214ENST00000533048 MAGEB6Q8N7X4 407 aa17.81■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms