RNA–Protein interactions for RNA: ENST00000533011.5

CHMP4A-206, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 5

Gene CHMP4A, Length 733 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-206ENST00000533011 CENPFP49454 3210 aa12.88□□□□□ -0.35
CHMP4A-206ENST00000533011 CTSWP56202 376 aa12.88□□□□□ -0.35
CHMP4A-206ENST00000533011 SLC4A10Q6U841 1118 aa12.88□□□□□ -0.35
CHMP4A-206ENST00000533011 PODNQ7Z5L7 613 aa12.88□□□□□ -0.35
CHMP4A-206ENST00000533011 TTLL11Q8NHH1 800 aa12.88□□□□□ -0.35
CHMP4A-206ENST00000533011 DPF3Q92784 378 aa12.88□□□□□ -0.35
CHMP4A-206ENST00000533011 SEC31BQ9NQW1 1179 aa12.88□□□□□ -0.35
CHMP4A-206ENST00000533011 NR2E3Q9Y5X4 410 aa12.88□□□□□ -0.35
CHMP4A-206ENST00000533011 MYH3P11055 1940 aa12.88□□□□□ -0.35
CHMP4A-206ENST00000533011 LRRC37AA6NMS7 1700 aa12.88□□□□□ -0.35
CHMP4A-206ENST00000533011 ALDH1L1O75891 902 aa12.87□□□□□ -0.35
CHMP4A-206ENST00000533011 CASP7P55210 303 aa12.87□□□□□ -0.35
CHMP4A-206ENST00000533011 GPR153Q6NV75 609 aa12.87□□□□□ -0.35
CHMP4A-206ENST00000533011 NKX2-3Q8TAU0 364 aa12.87□□□□□ -0.35
CHMP4A-206ENST00000533011 CD99L2Q8TCZ2 262 aa12.87□□□□□ -0.35
CHMP4A-206ENST00000533011 CCDC85AQ96PX6 553 aaPredicted RBP12.87□□□□□ -0.35
CHMP4A-206ENST00000533011 HTATIP2Q9BUP3 242 aa12.87□□□□□ -0.35
CHMP4A-206ENST00000533011 PLA2G12BQ9BX93 195 aa12.87□□□□□ -0.35
CHMP4A-206ENST00000533011 SRCIN1Q9C0H9 1055 aa12.87□□□□□ -0.35
CHMP4A-206ENST00000533011 BRCA2P51587 3418 aa12.86□□□□□ -0.35
CHMP4A-206ENST00000533011 USP17L3A6NCW0 530 aa12.86□□□□□ -0.35
CHMP4A-206ENST00000533011 USP17L4A6NCW7 530 aa12.86□□□□□ -0.35
CHMP4A-206ENST00000533011 MAP3K11Q16584 847 aa12.86□□□□□ -0.35
CHMP4A-206ENST00000533011 USP17L1Q7RTZ2 530 aa12.86□□□□□ -0.35
CHMP4A-206ENST00000533011 APOBEC3FQ8IUX4 373 aaKnown RBP12.86□□□□□ -0.35
CHMP4A-206ENST00000533011 CDC5LQ99459 802 aaKnown RBP12.86□□□□□ -0.35
CHMP4A-206ENST00000533011 PRO3102Q9H379 93 aa12.86□□□□□ -0.35
CHMP4A-206ENST00000533011 SMC4Q9NTJ3 1288 aa12.86□□□□□ -0.35
CHMP4A-206ENST00000533011 COL4A1P02462 1669 aa12.86□□□□□ -0.35
CHMP4A-206ENST00000533011 GRM8O00222 908 aa12.85□□□□□ -0.35
CHMP4A-206ENST00000533011 PPP1R12BO60237 982 aaPredicted RBP12.85□□□□□ -0.35
CHMP4A-206ENST00000533011 PRAMEF18Q5VWM3 479 aa12.85□□□□□ -0.35
CHMP4A-206ENST00000533011 ANKRD18AQ8IVF6 992 aa12.85□□□□□ -0.35
CHMP4A-206ENST00000533011 GREM2Q9H772 168 aa12.85□□□□□ -0.35
CHMP4A-206ENST00000533011 C9orf78Q9NZ63 289 aaPredicted RBP12.85□□□□□ -0.35
CHMP4A-206ENST00000533011 ANKIB1Q9P2G1 1089 aa12.85□□□□□ -0.35
CHMP4A-206ENST00000533011 GGA1Q9UJY5 639 aa12.85□□□□□ -0.35
CHMP4A-206ENST00000533011 ANGEL1Q9UNK9 670 aaKnown RBP12.85□□□□□ -0.35
CHMP4A-206ENST00000533011 RANBP2P49792 3224 aaKnown RBP12.85□□□□□ -0.35
CHMP4A-206ENST00000533011 MYO3BQ8WXR4 1341 aa12.85□□□□□ -0.35
CHMP4A-206ENST00000533011 IGF2BP3O00425 579 aaKnown RBP eCLIP12.84□□□□□ -0.35
CHMP4A-206ENST00000533011 GNRH1P01148 92 aa12.84□□□□□ -0.35
CHMP4A-206ENST00000533011 CSF1RP07333 972 aa12.84□□□□□ -0.35
CHMP4A-206ENST00000533011 CAPN2P17655 700 aa12.84□□□□□ -0.35
CHMP4A-206ENST00000533011 CRHR2Q13324 411 aa12.84□□□□□ -0.35
CHMP4A-206ENST00000533011 NBPF9Q3BBW0 867 aa12.84□□□□□ -0.35
CHMP4A-206ENST00000533011 COL6A3P12111 3177 aa12.84□□□□□ -0.35
CHMP4A-206ENST00000533011 TESPA1A2RU30 521 aaPredicted RBP12.83□□□□□ -0.36
CHMP4A-206ENST00000533011 WNT10BO00744 389 aa12.83□□□□□ -0.36
CHMP4A-206ENST00000533011 WDHD1O75717 1129 aaPredicted RBP12.83□□□□□ -0.36
CHMP4A-206ENST00000533011 PRMT2P55345 433 aa12.83□□□□□ -0.36
CHMP4A-206ENST00000533011 FOXO4P98177 505 aa12.83□□□□□ -0.36
CHMP4A-206ENST00000533011 WNK4Q96J92 1243 aa12.83□□□□□ -0.36
CHMP4A-206ENST00000533011 UFL1O94874 794 aa12.82□□□□□ -0.36
CHMP4A-206ENST00000533011 ITGA6P23229 1130 aa12.82□□□□□ -0.36
CHMP4A-206ENST00000533011 RARSP54136 660 aaKnown RBP12.82□□□□□ -0.36
CHMP4A-206ENST00000533011 BSDC1Q9NW68 430 aaPredicted RBP12.82□□□□□ -0.36
CHMP4A-206ENST00000533011 PPP2R3BQ9Y5P8 575 aa12.82□□□□□ -0.36
CHMP4A-206ENST00000533011 ZBED9Q6R2W3 1325 aa12.82□□□□□ -0.36
CHMP4A-206ENST00000533011 COL1A1P02452 1464 aaPredicted RBP12.81□□□□□ -0.36
CHMP4A-206ENST00000533011 IGHMBP2P38935 993 aaKnown RBP12.81□□□□□ -0.36
CHMP4A-206ENST00000533011 PRKG1Q13976 671 aa12.81□□□□□ -0.36
CHMP4A-206ENST00000533011 KIF22Q14807 665 aa12.81□□□□□ -0.36
CHMP4A-206ENST00000533011 SUPT20HL1Q3ZLR7 823 aa12.81□□□□□ -0.36
CHMP4A-206ENST00000533011 ZFYVE28Q9HCC9 887 aa12.81□□□□□ -0.36
CHMP4A-206ENST00000533011 NOB1Q9ULX3 412 aaKnown RBP12.81□□□□□ -0.36
CHMP4A-206ENST00000533011 PTCH2Q9Y6C5 1203 aa12.81□□□□□ -0.36
CHMP4A-206ENST00000533011 UTYO14607 1347 aa12.81□□□□□ -0.36
CHMP4A-206ENST00000533011 XDHP47989 1333 aa12.81□□□□□ -0.36
CHMP4A-206ENST00000533011 ANKRD18BA2A2Z9 1011 aa12.8□□□□□ -0.36
CHMP4A-206ENST00000533011 NBPF7P0C2Y1 421 aaPredicted RBP12.8□□□□□ -0.36
CHMP4A-206ENST00000533011 ATP2B4P23634 1241 aa12.8□□□□□ -0.36
CHMP4A-206ENST00000533011 IFIT5Q13325 482 aaKnown RBP12.8□□□□□ -0.36
CHMP4A-206ENST00000533011 STRIP1Q5VSL9 837 aa12.8□□□□□ -0.36
CHMP4A-206ENST00000533011 LMBR1LQ6UX01 489 aa12.8□□□□□ -0.36
CHMP4A-206ENST00000533011 MPHOSPH8Q99549 860 aa12.8□□□□□ -0.36
CHMP4A-206ENST00000533011 API5Q9BZZ5 524 aaKnown RBP12.8□□□□□ -0.36
CHMP4A-206ENST00000533011 MINPP1Q9UNW1 487 aa12.8□□□□□ -0.36
CHMP4A-206ENST00000533011 SCAF8Q9UPN6 1271 aaKnown RBP12.8□□□□□ -0.36
CHMP4A-206ENST00000533011 STXBP5LQ9Y2K9 1186 aa12.8□□□□□ -0.36
CHMP4A-206ENST00000533011 CHMP3Q9Y3E7 222 aa12.8□□□□□ -0.36
CHMP4A-206ENST00000533011 SPEF2Q9C093 1822 aa12.8□□□□□ -0.36
CHMP4A-206ENST00000533011 KIF16BQ96L93 1317 aa12.8□□□□□ -0.36
CHMP4A-206ENST00000533011 SCN9AQ15858 1988 aa12.8□□□□□ -0.36
CHMP4A-206ENST00000533011 WTIPA6NIX2 430 aaPredicted RBP12.79□□□□□ -0.36
CHMP4A-206ENST00000533011 IREB2P48200 963 aaKnown RBP12.79□□□□□ -0.36
CHMP4A-206ENST00000533011 CCT4P50991 539 aaKnown RBP12.79□□□□□ -0.36
CHMP4A-206ENST00000533011 EPHA10Q5JZY3 1008 aa12.79□□□□□ -0.36
CHMP4A-206ENST00000533011 ARHGAP45Q92619 1136 aa12.79□□□□□ -0.36
CHMP4A-206ENST00000533011 DEFB129Q9H1M3 183 aa12.79□□□□□ -0.36
CHMP4A-206ENST00000533011 ZBTB7BO15156 539 aaPredicted RBP12.78□□□□□ -0.36
CHMP4A-206ENST00000533011 CCDC57Q2TAC2 916 aa12.78□□□□□ -0.36
CHMP4A-206ENST00000533011 ANKRD13AQ8IZ07 590 aa12.78□□□□□ -0.36
CHMP4A-206ENST00000533011 HELBQ8NG08 1087 aaPredicted RBP12.78□□□□□ -0.36
CHMP4A-206ENST00000533011 KAZALD1Q96I82 304 aa12.78□□□□□ -0.36
CHMP4A-206ENST00000533011 SUCLG2Q96I99 432 aa12.78□□□□□ -0.36
CHMP4A-206ENST00000533011 ANKRD2Q9GZV1 360 aa12.78□□□□□ -0.36
CHMP4A-206ENST00000533011 USP44Q9H0E7 712 aa12.78□□□□□ -0.36
CHMP4A-206ENST00000533011 IPO8O15397 1037 aaKnown RBP12.77□□□□□ -0.37
CHMP4A-206ENST00000533011 GJA8P48165 433 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms