RNA–Protein interactions for RNA: ENST00000532649.5

CTNND1-232, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 6,026 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-232ENST00000532649 PLEKHM2Q8IWE5 1019 aa9.97□□□□□ -0.81
CTNND1-232ENST00000532649 ARL1P40616 181 aaPredicted RBP9.96□□□□□ -0.81
CTNND1-232ENST00000532649 PLS1Q14651 629 aa9.96□□□□□ -0.81
CTNND1-232ENST00000532649 BMS1Q14692 1282 aaKnown RBP9.96□□□□□ -0.81
CTNND1-232ENST00000532649 SUCLG2Q96I99 432 aa9.96□□□□□ -0.81
CTNND1-232ENST00000532649 KIAA0232Q92628 1395 aa9.96□□□□□ -0.81
CTNND1-232ENST00000532649 ROBO2Q9HCK4 1378 aa9.96□□□□□ -0.81
CTNND1-232ENST00000532649 KDM6BO15054 1643 aa9.96□□□□□ -0.81
CTNND1-232ENST00000532649 FAM135BQ49AJ0 1406 aa9.96□□□□□ -0.81
CTNND1-232ENST00000532649 TAF5LO75529 589 aa9.96□□□□□ -0.81
CTNND1-232ENST00000532649 ARHGAP29Q52LW3 1261 aa9.96□□□□□ -0.81
CTNND1-232ENST00000532649 KDM5CP41229 1560 aa9.96□□□□□ -0.82
CTNND1-232ENST00000532649 SHROOM2Q13796 1616 aa9.96□□□□□ -0.82
CTNND1-232ENST00000532649 BIN1O00499 593 aa9.96□□□□□ -0.82
CTNND1-232ENST00000532649 TNNI2P48788 182 aa9.96□□□□□ -0.82
CTNND1-232ENST00000532649 GCKRQ14397 625 aa9.96□□□□□ -0.82
CTNND1-232ENST00000532649 DPP8Q6V1X1 898 aaPredicted RBP9.96□□□□□ -0.82
CTNND1-232ENST00000532649 LUZP1Q86V48 1076 aa9.96□□□□□ -0.82
CTNND1-232ENST00000532649 TEX11Q8IYF3 940 aa9.96□□□□□ -0.82
CTNND1-232ENST00000532649 XAGE2Q96GT9 111 aa9.96□□□□□ -0.82
CTNND1-232ENST00000532649 ZSCAN16Q9H4T2 348 aaPredicted RBP9.96□□□□□ -0.82
CTNND1-232ENST00000532649 DDX19AQ9NUU7 478 aaKnown RBP9.96□□□□□ -0.82
CTNND1-232ENST00000532649 SAP30BPQ9UHR5 308 aaKnown RBP9.96□□□□□ -0.82
CTNND1-232ENST00000532649 RTL9Q8NET4 1388 aa9.96□□□□□ -0.82
CTNND1-232ENST00000532649 INSRP06213 1382 aa9.96□□□□□ -0.82
CTNND1-232ENST00000532649 CREB3L3Q68CJ9 461 aa9.95□□□□□ -0.82
CTNND1-232ENST00000532649 STXBP4Q6ZWJ1 553 aa9.95□□□□□ -0.82
CTNND1-232ENST00000532649 SMARCC2Q8TAQ2 1214 aa9.95□□□□□ -0.82
CTNND1-232ENST00000532649 ZMYM4Q5VZL5 1548 aa9.95□□□□□ -0.82
CTNND1-232ENST00000532649 DBNDD2Q9BQY9 259 aa9.95□□□□□ -0.82
CTNND1-232ENST00000532649 KCNQ3O43525 872 aa9.95□□□□□ -0.82
CTNND1-232ENST00000532649 CALM1P0DP23 149 aa9.95□□□□□ -0.82
CTNND1-232ENST00000532649 CALM2P0DP24 149 aa9.95□□□□□ -0.82
CTNND1-232ENST00000532649 CALM3P0DP25 149 aa9.95□□□□□ -0.82
CTNND1-232ENST00000532649 GBP3Q9H0R5 595 aa9.95□□□□□ -0.82
CTNND1-232ENST00000532649 SMC5Q8IY18 1101 aa9.95□□□□□ -0.82
CTNND1-232ENST00000532649 OTUD6BQ8N6M0 293 aa9.95□□□□□ -0.82
CTNND1-232ENST00000532649 PYM1Q9BRP8 204 aaKnown RBP9.95□□□□□ -0.82
CTNND1-232ENST00000532649 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP9.95□□□□□ -0.827e-6■□□□□ 8.3
CTNND1-232ENST00000532649 QTRT2Q9H974 415 aaKnown RBP9.95□□□□□ -0.82
CTNND1-232ENST00000532649 PUF60Q9UHX1 559 aaKnown RBP9.95□□□□□ -0.82
CTNND1-232ENST00000532649 MCM3P25205 808 aa9.95□□□□□ -0.82
CTNND1-232ENST00000532649 TTC6Q86TZ1 520 aa9.95□□□□□ -0.82
CTNND1-232ENST00000532649 IL17REQ8NFR9 667 aa9.95□□□□□ -0.82
CTNND1-232ENST00000532649 CRACR2AQ9BSW2 395 aa9.95□□□□□ -0.82
CTNND1-232ENST00000532649 NDC80O14777 642 aa9.94□□□□□ -0.82
CTNND1-232ENST00000532649 C6orf163Q5TEZ5 329 aa9.94□□□□□ -0.82
CTNND1-232ENST00000532649 RRP36Q96EU6 259 aaKnown RBP9.94□□□□□ -0.82
CTNND1-232ENST00000532649 ZSCAN22P10073 491 aaPredicted RBP9.94□□□□□ -0.82
CTNND1-232ENST00000532649 CHMLP26374 656 aa9.94□□□□□ -0.82
CTNND1-232ENST00000532649 MSL1Q68DK7 614 aa9.94□□□□□ -0.82
CTNND1-232ENST00000532649 SYCP3Q8IZU3 236 aa9.94□□□□□ -0.82
CTNND1-232ENST00000532649 LARGE2Q8N3Y3 721 aa9.94□□□□□ -0.82
CTNND1-232ENST00000532649 ERMNQ8TAM6 284 aa9.94□□□□□ -0.82
CTNND1-232ENST00000532649 BICD1Q96G01 975 aa9.94□□□□□ -0.82
CTNND1-232ENST00000532649 TRPC5Q9UL62 973 aaPredicted RBP9.94□□□□□ -0.82
CTNND1-232ENST00000532649 RAD50Q92878 1312 aa9.94□□□□□ -0.82
CTNND1-232ENST00000532649 ZNF335Q9H4Z2 1342 aaPredicted RBP9.94□□□□□ -0.82
CTNND1-232ENST00000532649 MYOM2P54296 1465 aa9.94□□□□□ -0.82
CTNND1-232ENST00000532649 SH3BP5O60239 455 aa9.94□□□□□ -0.82
CTNND1-232ENST00000532649 ACTN2P35609 894 aa9.94□□□□□ -0.82
CTNND1-232ENST00000532649 APOBRQ0VD83 1088 aa9.94□□□□□ -0.82
CTNND1-232ENST00000532649 IL27Q8NEV9 243 aa9.94□□□□□ -0.82
CTNND1-232ENST00000532649 PPP1R14CQ8TAE6 165 aa9.94□□□□□ -0.82
CTNND1-232ENST00000532649 HELLSQ9NRZ9 838 aa9.94□□□□□ -0.82
CTNND1-232ENST00000532649 CCDC175P0C221 793 aa9.94□□□□□ -0.82
CTNND1-232ENST00000532649 TIGD1Q96MW7 591 aa9.94□□□□□ -0.82
CTNND1-232ENST00000532649 FSD2A1L4K1 749 aa9.94□□□□□ -0.82
CTNND1-232ENST00000532649 TNNT1P13805 278 aa9.94□□□□□ -0.82
CTNND1-232ENST00000532649 MAP9Q49MG5 647 aa9.94□□□□□ -0.82
CTNND1-232ENST00000532649 TCERG1LQ5VWI1 586 aa9.94□□□□□ -0.82
CTNND1-232ENST00000532649 CCDC102BQ68D86 513 aa9.94□□□□□ -0.82
CTNND1-232ENST00000532649 BRPF3Q9ULD4 1205 aa9.94□□□□□ -0.82
CTNND1-232ENST00000532649 TBCAO75347 108 aaKnown RBP9.93□□□□□ -0.82
CTNND1-232ENST00000532649 GIGYF1O75420 1035 aaPredicted RBP9.93□□□□□ -0.82
CTNND1-232ENST00000532649 ECM2O94769 699 aaPredicted RBP9.93□□□□□ -0.82
CTNND1-232ENST00000532649 PRKCSHP14314 528 aaPredicted RBP9.93□□□□□ -0.82
CTNND1-232ENST00000532649 MTIF2P46199 727 aaKnown RBP9.93□□□□□ -0.82
CTNND1-232ENST00000532649 ISM2Q6H9L7 571 aa9.93□□□□□ -0.82
CTNND1-232ENST00000532649 ZKSCAN3Q9BRR0 538 aa9.93□□□□□ -0.82
CTNND1-232ENST00000532649 C6orf50Q9HD87 102 aa9.93□□□□□ -0.82
CTNND1-232ENST00000532649 SFPQP23246 707 aaKnown RBP eCLIP9.93□□□□□ -0.821e-8■■■□□ 15.1
CTNND1-232ENST00000532649 CCDC40Q4G0X9 1142 aa9.93□□□□□ -0.82
CTNND1-232ENST00000532649 KANK3Q6NY19 840 aa9.93□□□□□ -0.82
CTNND1-232ENST00000532649 TMCO3Q6UWJ1 677 aa9.93□□□□□ -0.82
CTNND1-232ENST00000532649 ARMT1Q9H993 441 aa9.93□□□□□ -0.82
CTNND1-232ENST00000532649 TOP1P11387 765 aaKnown RBP9.93□□□□□ -0.82
CTNND1-232ENST00000532649 RXRAP19793 462 aa9.93□□□□□ -0.82
CTNND1-232ENST00000532649 TCIRG1Q13488 830 aa9.93□□□□□ -0.82
CTNND1-232ENST00000532649 TAF12Q16514 161 aa9.93□□□□□ -0.82
CTNND1-232ENST00000532649 CCDC129Q6ZRS4 1044 aa9.93□□□□□ -0.82
CTNND1-232ENST00000532649 CCDC117Q8IWD4 279 aaPredicted RBP9.93□□□□□ -0.82
CTNND1-232ENST00000532649 LPIN2Q92539 896 aa9.93□□□□□ -0.82
CTNND1-232ENST00000532649 IKBKGQ9Y6K9 419 aa9.93□□□□□ -0.82
CTNND1-232ENST00000532649 BMP15O95972 392 aa9.93□□□□□ -0.82
CTNND1-232ENST00000532649 RAB3GAP1Q15042 981 aa9.93□□□□□ -0.82
CTNND1-232ENST00000532649 ABCC3O15438 1527 aa9.93□□□□□ -0.82
CTNND1-232ENST00000532649 SPATA31E1Q6ZUB1 1445 aa9.93□□□□□ -0.82
CTNND1-232ENST00000532649 SPDYE3A6NKU9 549 aa9.92□□□□□ -0.82
CTNND1-232ENST00000532649 RBM10P98175 930 aaKnown RBP9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms