RNA–Protein interactions for RNA: ENST00000532602.1

PCDHA9-202, Transcript of protocadherin alpha 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA9, Length 6,293 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA9-202ENST00000532602 CPA1P15085 419 aa16.86■□□□□ 0.29
PCDHA9-202ENST00000532602 OTUD7AQ8TE49 926 aaPredicted RBP16.86■□□□□ 0.29
PCDHA9-202ENST00000532602 DCTPP1Q9H773 170 aa16.86■□□□□ 0.29
PCDHA9-202ENST00000532602 RTL9Q8NET4 1388 aa16.86■□□□□ 0.29
PCDHA9-202ENST00000532602 IFFO1Q0D2I5 559 aa16.85■□□□□ 0.29
PCDHA9-202ENST00000532602 IFI16Q16666 785 aaKnown RBP16.85■□□□□ 0.29
PCDHA9-202ENST00000532602 KRT13P13646 458 aa16.85■□□□□ 0.29
PCDHA9-202ENST00000532602 NCBP1Q09161 790 aaKnown RBP16.85■□□□□ 0.29
PCDHA9-202ENST00000532602 GIMAP6Q6P9H5 292 aa16.85■□□□□ 0.29
PCDHA9-202ENST00000532602 KCNG4Q8TDN1 519 aa16.85■□□□□ 0.29
PCDHA9-202ENST00000532602 SUCLG2Q96I99 432 aa16.85■□□□□ 0.29
PCDHA9-202ENST00000532602 PLVAPQ9BX97 442 aa16.85■□□□□ 0.29
PCDHA9-202ENST00000532602 TRMT1Q9NXH9 659 aaKnown RBP16.85■□□□□ 0.29
PCDHA9-202ENST00000532602 TTC41PQ6P2S7 1318 aa16.85■□□□□ 0.29
PCDHA9-202ENST00000532602 PLEKHM2Q8IWE5 1019 aa16.85■□□□□ 0.29
PCDHA9-202ENST00000532602 SPAG1Q07617 926 aa16.85■□□□□ 0.29
PCDHA9-202ENST00000532602 TMCO5BA8MYB1 307 aa16.85■□□□□ 0.29
PCDHA9-202ENST00000532602 PDE8AO60658 829 aa16.85■□□□□ 0.29
PCDHA9-202ENST00000532602 URI1O94763 535 aaPredicted RBP16.85■□□□□ 0.29
PCDHA9-202ENST00000532602 PRKG1Q13976 671 aa16.85■□□□□ 0.29
PCDHA9-202ENST00000532602 TMC6Q7Z403 805 aa16.85■□□□□ 0.29
PCDHA9-202ENST00000532602 XAGE2Q96GT9 111 aa16.85■□□□□ 0.29
PCDHA9-202ENST00000532602 ARHGEF10O15013 1369 aa16.85■□□□□ 0.29
PCDHA9-202ENST00000532602 SPDYE3A6NKU9 549 aa16.84■□□□□ 0.29
PCDHA9-202ENST00000532602 STAT6P42226 847 aa16.84■□□□□ 0.29
PCDHA9-202ENST00000532602 SP4Q02446 784 aa16.84■□□□□ 0.29
PCDHA9-202ENST00000532602 SH2D4AQ9H788 454 aa16.84■□□□□ 0.29
PCDHA9-202ENST00000532602 HIBADHP31937 336 aaKnown RBP16.84■□□□□ 0.29
PCDHA9-202ENST00000532602 UBE2HP62256 183 aa16.84■□□□□ 0.29
PCDHA9-202ENST00000532602 TBC1D5Q92609 795 aa16.84■□□□□ 0.29
PCDHA9-202ENST00000532602 CCDC113Q9H0I3 377 aa16.84■□□□□ 0.29
PCDHA9-202ENST00000532602 NEO1Q92859 1461 aa16.84■□□□□ 0.29
PCDHA9-202ENST00000532602 SYKP43405 635 aa16.84■□□□□ 0.29
PCDHA9-202ENST00000532602 TTC6Q86TZ1 520 aa16.84■□□□□ 0.29
PCDHA9-202ENST00000532602 RRP36Q96EU6 259 aaKnown RBP16.84■□□□□ 0.29
PCDHA9-202ENST00000532602 COMMD10Q9Y6G5 202 aa16.84■□□□□ 0.29
PCDHA9-202ENST00000532602 ZYXQ15942 572 aaKnown RBP16.83■□□□□ 0.29
PCDHA9-202ENST00000532602 PARP10Q53GL7 1025 aa16.83■□□□□ 0.29
PCDHA9-202ENST00000532602 TNNI3KQ59H18 835 aa16.83■□□□□ 0.29
PCDHA9-202ENST00000532602 SPAG5Q96R06 1193 aa16.83■□□□□ 0.29
PCDHA9-202ENST00000532602 GTPBP4Q9BZE4 634 aaKnown RBP16.83■□□□□ 0.29
PCDHA9-202ENST00000532602 FPGT-TNNI3KV9GXZ4 949 aa16.83■□□□□ 0.29
PCDHA9-202ENST00000532602 CCDC171Q6TFL3 1326 aa16.83■□□□□ 0.29
PCDHA9-202ENST00000532602 AK2P54819 239 aa16.83■□□□□ 0.29
PCDHA9-202ENST00000532602 TEX11Q8IYF3 940 aa16.83■□□□□ 0.29
PCDHA9-202ENST00000532602 LRRC45Q96CN5 670 aa16.83■□□□□ 0.29
PCDHA9-202ENST00000532602 PLIN2Q99541 437 aa16.83■□□□□ 0.29
PCDHA9-202ENST00000532602 GGA1Q9UJY5 639 aa16.83■□□□□ 0.29
PCDHA9-202ENST00000532602 UGGT1Q9NYU2 1555 aa16.83■□□□□ 0.29
PCDHA9-202ENST00000532602 ZBTB7BO15156 539 aaPredicted RBP16.83■□□□□ 0.28
PCDHA9-202ENST00000532602 EHBP1Q8NDI1 1231 aa16.83■□□□□ 0.28
PCDHA9-202ENST00000532602 IMPG2Q9BZV3 1241 aa16.83■□□□□ 0.28
PCDHA9-202ENST00000532602 PKD2L1Q9P0L9 805 aa16.83■□□□□ 0.28
PCDHA9-202ENST00000532602 PABPN1LA6NDY0 278 aaKnown RBP16.83■□□□□ 0.28
PCDHA9-202ENST00000532602 DBNDD2Q9BQY9 259 aa16.83■□□□□ 0.28
PCDHA9-202ENST00000532602 DENND2AQ9ULE3 1009 aa16.83■□□□□ 0.28
PCDHA9-202ENST00000532602 SH3TC1Q8TE82 1336 aa16.83■□□□□ 0.28
PCDHA9-202ENST00000532602 ZNF496Q96IT1 587 aaPredicted RBP16.83■□□□□ 0.28
PCDHA9-202ENST00000532602 GPCPD1Q9NPB8 672 aa16.83■□□□□ 0.28
PCDHA9-202ENST00000532602 AATFQ9NY61 560 aaKnown RBP eCLIP16.83■□□□□ 0.28
PCDHA9-202ENST00000532602 UQCRHLA0A096LP55 91 aa16.82■□□□□ 0.28
PCDHA9-202ENST00000532602 N4BP3O15049 544 aa16.82■□□□□ 0.28
PCDHA9-202ENST00000532602 PHACTR2O75167 634 aa16.82■□□□□ 0.28
PCDHA9-202ENST00000532602 STAMBPO95630 424 aa16.82■□□□□ 0.28
PCDHA9-202ENST00000532602 UQCRHP07919 91 aa16.82■□□□□ 0.28
PCDHA9-202ENST00000532602 NOP2P46087 812 aaKnown RBP16.82■□□□□ 0.28
PCDHA9-202ENST00000532602 ZNF165P49910 485 aa16.82■□□□□ 0.28
PCDHA9-202ENST00000532602 ZCCHC11Q5TAX3 1644 aaKnown RBP16.82■□□□□ 0.28
PCDHA9-202ENST00000532602 MCM7P33993 719 aa16.82■□□□□ 0.28
PCDHA9-202ENST00000532602 MAP2K1Q02750 393 aaPredicted RBP16.82■□□□□ 0.28
PCDHA9-202ENST00000532602 PUM3Q15397 648 aaKnown RBP16.82■□□□□ 0.28
PCDHA9-202ENST00000532602 RRAGBQ5VZM2 374 aa16.82■□□□□ 0.28
PCDHA9-202ENST00000532602 FAM182BQ5T319 152 aa16.82■□□□□ 0.28
PCDHA9-202ENST00000532602 CALRP27797 417 aaKnown RBP16.82■□□□□ 0.28
PCDHA9-202ENST00000532602 SMC1AQ14683 1233 aaKnown RBP16.82■□□□□ 0.28
PCDHA9-202ENST00000532602 SAMD9LQ8IVG5 1584 aa16.82■□□□□ 0.28
PCDHA9-202ENST00000532602 H0YIN7 160 aa16.82■□□□□ 0.28
PCDHA9-202ENST00000532602 EYA2O00167 538 aa16.81■□□□□ 0.28
PCDHA9-202ENST00000532602 KIF4AO95239 1232 aa16.81■□□□□ 0.28
PCDHA9-202ENST00000532602 CTAGE1Q96RT6 745 aa16.81■□□□□ 0.28
PCDHA9-202ENST00000532602 SYNCQ9H7C4 482 aa16.81■□□□□ 0.28
PCDHA9-202ENST00000532602 TTC37Q6PGP7 1564 aa16.81■□□□□ 0.28
PCDHA9-202ENST00000532602 AKR1B10O60218 316 aa16.81■□□□□ 0.28
PCDHA9-202ENST00000532602 DNM1Q05193 864 aaKnown RBP16.81■□□□□ 0.28
PCDHA9-202ENST00000532602 DHX37Q8IY37 1157 aaKnown RBP16.81■□□□□ 0.28
PCDHA9-202ENST00000532602 GOPCQ9HD26 462 aa16.81■□□□□ 0.28
PCDHA9-202ENST00000532602 B4E1Z4 1266 aa16.81■□□□□ 0.28
PCDHA9-202ENST00000532602 USP48Q86UV5 1035 aa16.81■□□□□ 0.28
PCDHA9-202ENST00000532602 DDX12PQ92771 950 aa16.81■□□□□ 0.28
PCDHA9-202ENST00000532602 TCHPQ9BT92 498 aa16.81■□□□□ 0.28
PCDHA9-202ENST00000532602 GOLGA6L10A0A0M3HER8 536 aa16.81■□□□□ 0.28
PCDHA9-202ENST00000532602 POTEB2H3BUK9 544 aa16.81■□□□□ 0.28
PCDHA9-202ENST00000532602 PSMA7O14818 248 aa16.81■□□□□ 0.28
PCDHA9-202ENST00000532602 CHMLP26374 656 aa16.81■□□□□ 0.28
PCDHA9-202ENST00000532602 GNA11P29992 359 aa16.81■□□□□ 0.28
PCDHA9-202ENST00000532602 TCP10Q12799 353 aa16.81■□□□□ 0.28
PCDHA9-202ENST00000532602 DPP8Q6V1X1 898 aaPredicted RBP16.81■□□□□ 0.28
PCDHA9-202ENST00000532602 MAP3K9P80192 1104 aa16.8■□□□□ 0.28
PCDHA9-202ENST00000532602 DTNBO60941 627 aa16.8■□□□□ 0.28
PCDHA9-202ENST00000532602 KRT79Q5XKE5 535 aa16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms