RNA–Protein interactions for RNA: ENST00000532443.1

PPFIA1-221, Transcript of PTPRF interacting protein alpha 1, humanhuman

TSL 4

Gene PPFIA1, Length 587 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA1-221ENST00000532443 E9PCH4 1651 aa7.54□□□□□ -1.2
PPFIA1-221ENST00000532443 AGLP35573 1532 aa7.54□□□□□ -1.2
PPFIA1-221ENST00000532443 EFCAB6Q5THR3 1501 aa7.54□□□□□ -1.2
PPFIA1-221ENST00000532443 UBAP1LF5GYI3 381 aa7.54□□□□□ -1.2
PPFIA1-221ENST00000532443 GNB5O14775 395 aa7.54□□□□□ -1.2
PPFIA1-221ENST00000532443 CPB1P15086 417 aa7.54□□□□□ -1.2
PPFIA1-221ENST00000532443 NBPF8Q3BBV2 869 aa7.54□□□□□ -1.2
PPFIA1-221ENST00000532443 PHLDB3Q6NSJ2 640 aa7.54□□□□□ -1.2
PPFIA1-221ENST00000532443 HFE2Q6ZVN8 426 aa7.54□□□□□ -1.2
PPFIA1-221ENST00000532443 DHX32Q7L7V1 743 aaKnown RBP7.54□□□□□ -1.2
PPFIA1-221ENST00000532443 TRIM11Q96F44 468 aa7.54□□□□□ -1.2
PPFIA1-221ENST00000532443 DCAF5Q96JK2 942 aa7.54□□□□□ -1.2
PPFIA1-221ENST00000532443 NAGPAQ9UK23 515 aa7.54□□□□□ -1.2
PPFIA1-221ENST00000532443 ABL1P00519 1130 aa7.53□□□□□ -1.2
PPFIA1-221ENST00000532443 MPSTP25325 297 aa7.53□□□□□ -1.2
PPFIA1-221ENST00000532443 ZNF211Q13398 564 aaPredicted RBP7.53□□□□□ -1.2
PPFIA1-221ENST00000532443 ZNF326Q5BKZ1 582 aaKnown RBP7.53□□□□□ -1.2
PPFIA1-221ENST00000532443 FAM35AQ86V20 835 aa7.53□□□□□ -1.2
PPFIA1-221ENST00000532443 MICALL1Q8N3F8 863 aa7.53□□□□□ -1.2
PPFIA1-221ENST00000532443 ABTB2Q8N961 1025 aa7.53□□□□□ -1.2
PPFIA1-221ENST00000532443 HELQQ8TDG4 1101 aa7.53□□□□□ -1.2
PPFIA1-221ENST00000532443 PIK3R5Q8WYR1 880 aa7.53□□□□□ -1.2
PPFIA1-221ENST00000532443 PLVAPQ9BX97 442 aa7.53□□□□□ -1.2
PPFIA1-221ENST00000532443 NEURL4Q96JN8 1562 aa7.53□□□□□ -1.2
PPFIA1-221ENST00000532443 ARHGAP31Q2M1Z3 1444 aa7.52□□□□□ -1.2
PPFIA1-221ENST00000532443 CNTLNQ9NXG0 1405 aa7.52□□□□□ -1.2
PPFIA1-221ENST00000532443 SPHKAPQ2M3C7 1700 aa7.52□□□□□ -1.2
PPFIA1-221ENST00000532443 ZC3H13Q5T200 1668 aaKnown RBP7.52□□□□□ -1.21
PPFIA1-221ENST00000532443 HSPA5P11021 654 aaKnown RBP7.52□□□□□ -1.21
PPFIA1-221ENST00000532443 RGL3Q3MIN7 710 aa7.52□□□□□ -1.21
PPFIA1-221ENST00000532443 GPAT2Q6NUI2 795 aa7.52□□□□□ -1.21
PPFIA1-221ENST00000532443 PSAPL1Q6NUJ1 521 aa7.52□□□□□ -1.21
PPFIA1-221ENST00000532443 NSUN5Q96P11 429 aaKnown RBP7.52□□□□□ -1.21
PPFIA1-221ENST00000532443 JPH1Q9HDC5 661 aaPredicted RBP7.52□□□□□ -1.21
PPFIA1-221ENST00000532443 USTQ9Y2C2 406 aa7.52□□□□□ -1.21
PPFIA1-221ENST00000532443 ABCC3O15438 1527 aa7.52□□□□□ -1.21
PPFIA1-221ENST00000532443 RALGAPBQ86X10 1494 aa7.51□□□□□ -1.21
PPFIA1-221ENST00000532443 ZBTB42B2RXF5 422 aa7.51□□□□□ -1.21
PPFIA1-221ENST00000532443 FAM229AH3BQW9 127 aa7.51□□□□□ -1.21
PPFIA1-221ENST00000532443 MMP20O60882 483 aa7.51□□□□□ -1.21
PPFIA1-221ENST00000532443 MAP3K6O95382 1288 aa7.51□□□□□ -1.21
PPFIA1-221ENST00000532443 EFCC1Q9HA90 598 aa7.51□□□□□ -1.21
PPFIA1-221ENST00000532443 SPATA31E1Q6ZUB1 1445 aa7.51□□□□□ -1.21
PPFIA1-221ENST00000532443 RPGRIP1LQ68CZ1 1315 aa7.51□□□□□ -1.21
PPFIA1-221ENST00000532443 CEP152O94986 1710 aa7.5□□□□□ -1.21
PPFIA1-221ENST00000532443 KRBA1A5PL33 1030 aa7.5□□□□□ -1.21
PPFIA1-221ENST00000532443 PIK3R2O00459 728 aa7.5□□□□□ -1.21
PPFIA1-221ENST00000532443 EIF2AK2P19525 551 aaKnown RBP7.5□□□□□ -1.21
PPFIA1-221ENST00000532443 PLAURQ03405 335 aa7.5□□□□□ -1.21
PPFIA1-221ENST00000532443 DNM1Q05193 864 aaKnown RBP7.5□□□□□ -1.21
PPFIA1-221ENST00000532443 C20orf204Q6ZNR8 217 aa7.5□□□□□ -1.21
PPFIA1-221ENST00000532443 EDEM1Q92611 657 aa7.5□□□□□ -1.21
PPFIA1-221ENST00000532443 NUDT16Q96DE0 195 aaKnown RBP7.5□□□□□ -1.21
PPFIA1-221ENST00000532443 CARD11Q9BXL7 1154 aa7.5□□□□□ -1.21
PPFIA1-221ENST00000532443 SLC52A1Q9NWF4 448 aa7.5□□□□□ -1.21
PPFIA1-221ENST00000532443 FAM13BQ9NYF5 915 aa7.5□□□□□ -1.21
PPFIA1-221ENST00000532443 ARHGEF40Q8TER5 1519 aa7.5□□□□□ -1.21
PPFIA1-221ENST00000532443 NPATQ14207 1427 aa7.5□□□□□ -1.21
PPFIA1-221ENST00000532443 PRAG1Q86YV5 1406 aa7.5□□□□□ -1.21
PPFIA1-221ENST00000532443 ARID4BQ4LE39 1312 aaPredicted RBP7.5□□□□□ -1.21
PPFIA1-221ENST00000532443 COL17A1Q9UMD9 1497 aaPredicted RBP7.49□□□□□ -1.21
PPFIA1-221ENST00000532443 CAMSAP1Q5T5Y3 1602 aa7.49□□□□□ -1.21
PPFIA1-221ENST00000532443 ROCK2O75116 1388 aaKnown RBP7.49□□□□□ -1.21
PPFIA1-221ENST00000532443 A6NHS1 94 aa7.49□□□□□ -1.21
PPFIA1-221ENST00000532443 J3QW42 95 aa7.49□□□□□ -1.21
PPFIA1-221ENST00000532443 LILRB5O75023 590 aa7.49□□□□□ -1.21
PPFIA1-221ENST00000532443 EGFRP00533 1210 aa7.49□□□□□ -1.21
PPFIA1-221ENST00000532443 PSAPP07602 524 aa7.49□□□□□ -1.21
PPFIA1-221ENST00000532443 EIF1AXP47813 144 aaKnown RBP7.49□□□□□ -1.21
PPFIA1-221ENST00000532443 AAMPQ13685 434 aa7.49□□□□□ -1.21
PPFIA1-221ENST00000532443 PLA2G4EQ3MJ16 856 aa7.49□□□□□ -1.21
PPFIA1-221ENST00000532443 NOM1Q5C9Z4 860 aaKnown RBP7.49□□□□□ -1.21
PPFIA1-221ENST00000532443 PERM1Q5SV97 790 aa7.49□□□□□ -1.21
PPFIA1-221ENST00000532443 ELMSAN1Q6PJG2 1045 aa7.49□□□□□ -1.21
PPFIA1-221ENST00000532443 NLRP13Q86W25 1043 aa7.49□□□□□ -1.21
PPFIA1-221ENST00000532443 TLR7Q9NYK1 1049 aaKnown RBP7.49□□□□□ -1.21
PPFIA1-221ENST00000532443 NOP53Q9NZM5 478 aaKnown RBP7.49□□□□□ -1.21
PPFIA1-221ENST00000532443 CLTCL1P53675 1640 aa7.49□□□□□ -1.21
PPFIA1-221ENST00000532443 RGS9O75916 674 aaPredicted RBP7.48□□□□□ -1.21
PPFIA1-221ENST00000532443 NOS1P29475 1434 aa7.48□□□□□ -1.21
PPFIA1-221ENST00000532443 SERPINB4P48594 390 aa7.48□□□□□ -1.21
PPFIA1-221ENST00000532443 GPLD1P80108 840 aa7.48□□□□□ -1.21
PPFIA1-221ENST00000532443 COL9A3Q14050 684 aaPredicted RBP7.48□□□□□ -1.21
PPFIA1-221ENST00000532443 TRPM4Q8TD43 1214 aa7.48□□□□□ -1.21
PPFIA1-221ENST00000532443 MTMR7Q9Y216 660 aa7.48□□□□□ -1.21
PPFIA1-221ENST00000532443 GPRASP1Q5JY77 1395 aa7.47□□□□□ -1.21
PPFIA1-221ENST00000532443 USP47Q96K76 1375 aa7.47□□□□□ -1.21
PPFIA1-221ENST00000532443 ITGB2P05107 769 aa7.47□□□□□ -1.21
PPFIA1-221ENST00000532443 NID1P14543 1247 aa7.47□□□□□ -1.21
PPFIA1-221ENST00000532443 ARID4AP29374 1257 aaPredicted RBP7.47□□□□□ -1.21
PPFIA1-221ENST00000532443 DDX10Q13206 875 aaKnown RBP7.47□□□□□ -1.21
PPFIA1-221ENST00000532443 C8orf34Q49A92 452 aa7.47□□□□□ -1.21
PPFIA1-221ENST00000532443 TRAPPC3LQ5T215 181 aa7.47□□□□□ -1.21
PPFIA1-221ENST00000532443 LPIN3Q9BQK8 851 aa7.47□□□□□ -1.21
PPFIA1-221ENST00000532443 HIRIP3Q9BW71 556 aaPredicted RBP7.47□□□□□ -1.21
PPFIA1-221ENST00000532443 SMG9Q9H0W8 520 aaKnown RBP7.47□□□□□ -1.21
PPFIA1-221ENST00000532443 C11orf16Q9NQ32 467 aa7.47□□□□□ -1.21
PPFIA1-221ENST00000532443 KIF1BO60333 1816 aa7.47□□□□□ -1.21
PPFIA1-221ENST00000532443 PDGFAP04085 211 aa7.46□□□□□ -1.22
PPFIA1-221ENST00000532443 AFF1P51825 1210 aaKnown RBP7.46□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms