RNA–Protein interactions for RNA: ENST00000532149.1

CHD7-211, Transcript of chromodomain helicase DNA binding protein 7, humanhuman

TSL 2

Gene CHD7, Length 616 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7-211ENST00000532149 PDS5AQ29RF7 1337 aaKnown RBP14.61□□□□□ -0.07
CHD7-211ENST00000532149 DDX60Q8IY21 1712 aaKnown RBP14.61□□□□□ -0.07
CHD7-211ENST00000532149 TRAK2O60296 914 aa14.6□□□□□ -0.07
CHD7-211ENST00000532149 BRD1O95696 1058 aa14.6□□□□□ -0.07
CHD7-211ENST00000532149 GNAT2P19087 354 aa14.6□□□□□ -0.07
CHD7-211ENST00000532149 DEKP35659 375 aaKnown RBP14.6□□□□□ -0.07
CHD7-211ENST00000532149 NT5C2P49902 561 aa14.6□□□□□ -0.07
CHD7-211ENST00000532149 SEPT12Q8IYM1 358 aa14.6□□□□□ -0.07
CHD7-211ENST00000532149 SMC3Q9UQE7 1217 aa14.6□□□□□ -0.07
CHD7-211ENST00000532149 COLQQ9Y215 455 aaPredicted RBP14.6□□□□□ -0.07
CHD7-211ENST00000532149 MYH7P12883 1935 aa14.6□□□□□ -0.07
CHD7-211ENST00000532149 BAG4O95429 457 aaKnown RBP14.59□□□□□ -0.07
CHD7-211ENST00000532149 RFC4P35249 363 aa14.59□□□□□ -0.07
CHD7-211ENST00000532149 VASPP50552 380 aaPredicted RBP14.59□□□□□ -0.07
CHD7-211ENST00000532149 IMMTQ16891 758 aaKnown RBP14.59□□□□□ -0.07
CHD7-211ENST00000532149 CCDC102BQ68D86 513 aa14.59□□□□□ -0.07
CHD7-211ENST00000532149 ZNF772Q68DY9 489 aaPredicted RBP14.59□□□□□ -0.07
CHD7-211ENST00000532149 DHX32Q7L7V1 743 aaKnown RBP14.59□□□□□ -0.07
CHD7-211ENST00000532149 LLPHQ9BRT6 129 aaKnown RBP14.59□□□□□ -0.07
CHD7-211ENST00000532149 QTRT2Q9H974 415 aaKnown RBP14.59□□□□□ -0.07
CHD7-211ENST00000532149 TAF1LQ8IZX4 1826 aa14.59□□□□□ -0.07
CHD7-211ENST00000532149 COL24A1Q17RW2 1714 aa14.58□□□□□ -0.07
CHD7-211ENST00000532149 MBD3O95983 291 aa14.58□□□□□ -0.08
CHD7-211ENST00000532149 HSPD1P10809 573 aaKnown RBP14.58□□□□□ -0.08
CHD7-211ENST00000532149 HCLS1P14317 486 aaPredicted RBP14.58□□□□□ -0.08
CHD7-211ENST00000532149 ALX1Q15699 326 aa14.58□□□□□ -0.08
CHD7-211ENST00000532149 CAVIN4Q5BKX8 364 aa14.58□□□□□ -0.08
CHD7-211ENST00000532149 ZNF589Q86UQ0 364 aaPredicted RBP14.58□□□□□ -0.08
CHD7-211ENST00000532149 GNPATO15228 680 aa14.57□□□□□ -0.08
CHD7-211ENST00000532149 ADD2P35612 726 aa14.57□□□□□ -0.08
CHD7-211ENST00000532149 WASHC4Q2M389 1173 aa14.57□□□□□ -0.08
CHD7-211ENST00000532149 KLHL40Q2TBA0 621 aa14.57□□□□□ -0.08
CHD7-211ENST00000532149 NBPF5PQ86XG9 351 aaPredicted RBP14.57□□□□□ -0.08
CHD7-211ENST00000532149 SYNE4Q8N205 404 aa14.57□□□□□ -0.08
CHD7-211ENST00000532149 SPATA5Q8NB90 893 aa14.57□□□□□ -0.08
CHD7-211ENST00000532149 MTA3Q9BTC8 594 aa14.57□□□□□ -0.08
CHD7-211ENST00000532149 AGXT2Q9BYV1 514 aa14.57□□□□□ -0.08
CHD7-211ENST00000532149 DHX16O60231 1041 aaKnown RBP14.56□□□□□ -0.08
CHD7-211ENST00000532149 NCLP19338 710 aaKnown RBP14.56□□□□□ -0.08
CHD7-211ENST00000532149 ADORA1P30542 326 aa14.56□□□□□ -0.08
CHD7-211ENST00000532149 MCAMP43121 646 aa14.56□□□□□ -0.08
CHD7-211ENST00000532149 ZAP70P43403 619 aa14.56□□□□□ -0.08
CHD7-211ENST00000532149 DENND2AQ9ULE3 1009 aa14.56□□□□□ -0.08
CHD7-211ENST00000532149 MAST3O60307 1309 aa14.56□□□□□ -0.08
CHD7-211ENST00000532149 AKAP11Q9UKA4 1901 aa14.56□□□□□ -0.08
CHD7-211ENST00000532149 C4BP0C0L5 1744 aa14.55□□□□□ -0.08
CHD7-211ENST00000532149 CYP21A2P08686 494 aa14.55□□□□□ -0.08
CHD7-211ENST00000532149 RPS8P62241 208 aaKnown RBP14.55□□□□□ -0.08
CHD7-211ENST00000532149 HMGN5P82970 282 aaKnown RBP14.55□□□□□ -0.08
CHD7-211ENST00000532149 CHRNDQ07001 517 aa14.55□□□□□ -0.08
CHD7-211ENST00000532149 TRDNQ13061 729 aa14.55□□□□□ -0.08
CHD7-211ENST00000532149 ADCK5Q3MIX3 580 aa14.55□□□□□ -0.08
CHD7-211ENST00000532149 KRT27Q7Z3Y8 459 aa14.55□□□□□ -0.08
CHD7-211ENST00000532149 TMC4Q7Z404 712 aa14.55□□□□□ -0.08
CHD7-211ENST00000532149 ZGPATQ8N5A5 531 aaKnown RBP14.55□□□□□ -0.08
CHD7-211ENST00000532149 FLAD1Q8NFF5 587 aa14.55□□□□□ -0.08
CHD7-211ENST00000532149 EDC3Q96F86 508 aaKnown RBP14.55□□□□□ -0.08
CHD7-211ENST00000532149 ZNF274Q96GC6 653 aaPredicted RBP14.55□□□□□ -0.08
CHD7-211ENST00000532149 CCDC85AQ96PX6 553 aaPredicted RBP14.55□□□□□ -0.08
CHD7-211ENST00000532149 NACAP1Q9BZK3 213 aa14.55□□□□□ -0.08
CHD7-211ENST00000532149 ZNF213O14771 459 aa14.54□□□□□ -0.08
CHD7-211ENST00000532149 PCP11498 1178 aaKnown RBP14.54□□□□□ -0.08
CHD7-211ENST00000532149 EVCP57679 992 aa14.54□□□□□ -0.08
CHD7-211ENST00000532149 FGD1P98174 961 aa14.54□□□□□ -0.08
CHD7-211ENST00000532149 ERFEQ4G0M1 354 aa14.54□□□□□ -0.08
CHD7-211ENST00000532149 SLC9C2Q5TAH2 1124 aa14.54□□□□□ -0.08
CHD7-211ENST00000532149 DCAF8Q5TAQ9 597 aa14.54□□□□□ -0.08
CHD7-211ENST00000532149 CERS3Q8IU89 383 aa14.54□□□□□ -0.08
CHD7-211ENST00000532149 ARHGEF1Q92888 912 aaKnown RBP14.54□□□□□ -0.08
CHD7-211ENST00000532149 SYAP1Q96A49 352 aaPredicted RBP14.54□□□□□ -0.08
CHD7-211ENST00000532149 ZNF804BA4D1E1 1349 aa14.54□□□□□ -0.08
CHD7-211ENST00000532149 STX6O43752 255 aa14.53□□□□□ -0.08
CHD7-211ENST00000532149 ZSCAN22P10073 491 aaPredicted RBP14.53□□□□□ -0.08
CHD7-211ENST00000532149 PYGBP11216 843 aa14.53□□□□□ -0.08
CHD7-211ENST00000532149 MCM5P33992 734 aa14.53□□□□□ -0.08
CHD7-211ENST00000532149 RBM6P78332 1123 aaKnown RBP14.53□□□□□ -0.08
CHD7-211ENST00000532149 TBC1D9BQ66K14 1250 aa14.53□□□□□ -0.08
CHD7-211ENST00000532149 NCOA7Q8NI08 942 aa14.53□□□□□ -0.08
CHD7-211ENST00000532149 OSBP2Q969R2 916 aa14.53□□□□□ -0.08
CHD7-211ENST00000532149 CNNM2Q9H8M5 875 aa14.53□□□□□ -0.08
CHD7-211ENST00000532149 BCL2L12Q9HB09 334 aa14.53□□□□□ -0.08
CHD7-211ENST00000532149 PNPLA7Q6ZV29 1317 aa14.52□□□□□ -0.08
CHD7-211ENST00000532149 PLSCR1O15162 318 aa14.52□□□□□ -0.09
CHD7-211ENST00000532149 GPAA1O43292 621 aa14.52□□□□□ -0.09
CHD7-211ENST00000532149 PHKA1P46020 1223 aa14.52□□□□□ -0.09
CHD7-211ENST00000532149 EXOSC10Q01780 885 aaKnown RBP14.52□□□□□ -0.09
CHD7-211ENST00000532149 AIDAQ96BJ3 306 aa14.52□□□□□ -0.09
CHD7-211ENST00000532149 LEMD3Q9Y2U8 911 aa14.52□□□□□ -0.09
CHD7-211ENST00000532149 DOCK2Q92608 1830 aa14.52□□□□□ -0.09
CHD7-211ENST00000532149 PATL2C9JE40 543 aaKnown RBP14.51□□□□□ -0.09
CHD7-211ENST00000532149 E7EWF7 191 aa14.51□□□□□ -0.09
CHD7-211ENST00000532149 NPHP1O15259 732 aa14.51□□□□□ -0.09
CHD7-211ENST00000532149 PDE6AP16499 860 aa14.51□□□□□ -0.09
CHD7-211ENST00000532149 SPTY2D1Q68D10 685 aaPredicted RBP14.51□□□□□ -0.09
CHD7-211ENST00000532149 ATL3Q6DD88 541 aa14.51□□□□□ -0.09
CHD7-211ENST00000532149 GIMAP6Q6P9H5 292 aa14.51□□□□□ -0.09
CHD7-211ENST00000532149 RALYLQ86SE5 291 aaKnown RBP14.51□□□□□ -0.09
CHD7-211ENST00000532149 VPS37DQ86XT2 251 aa14.51□□□□□ -0.09
CHD7-211ENST00000532149 TMEM87AQ8NBN3 555 aa14.51□□□□□ -0.09
CHD7-211ENST00000532149 SEC31BQ9NQW1 1179 aa14.51□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms