RNA–Protein interactions for RNA: ENST00000531709.6

NXF1-211, Transcript of nuclear RNA export factor 1, humanhuman

TSL 1 (best) BASIC

Gene NXF1, Length 4,128 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-211ENST00000531709 TRIM22Q8IYM9 498 aa13.11□□□□□ -0.31
NXF1-211ENST00000531709 KRT222Q8N1A0 295 aa13.11□□□□□ -0.31
NXF1-211ENST00000531709 MYL10Q9BUA6 226 aa13.11□□□□□ -0.31
NXF1-211ENST00000531709 STOX1Q6ZVD7 989 aa13.11□□□□□ -0.31
NXF1-211ENST00000531709 HELBQ8NG08 1087 aaPredicted RBP13.11□□□□□ -0.31
NXF1-211ENST00000531709 FEZ1Q99689 392 aa13.11□□□□□ -0.31
NXF1-211ENST00000531709 UTP14AQ9BVJ6 771 aaKnown RBP13.11□□□□□ -0.31
NXF1-211ENST00000531709 RCOR1Q9UKL0 485 aa13.11□□□□□ -0.31
NXF1-211ENST00000531709 MTMR7Q9Y216 660 aa13.11□□□□□ -0.31
NXF1-211ENST00000531709 A0A0G2JLW4 131 aa13.11□□□□□ -0.31
NXF1-211ENST00000531709 SART3Q15020 963 aaKnown RBP13.11□□□□□ -0.31
NXF1-211ENST00000531709 TMEM67Q5HYA8 995 aa13.11□□□□□ -0.31
NXF1-211ENST00000531709 TEX35Q5T0J7 233 aa13.11□□□□□ -0.31
NXF1-211ENST00000531709 TMCO3Q6UWJ1 677 aa13.11□□□□□ -0.31
NXF1-211ENST00000531709 GTPBP4Q9BZE4 634 aaKnown RBP13.11□□□□□ -0.31
NXF1-211ENST00000531709 NAPBQ9H115 298 aa13.11□□□□□ -0.31
NXF1-211ENST00000531709 NCBP1Q09161 790 aaKnown RBP13.1□□□□□ -0.31
NXF1-211ENST00000531709 CCDC150Q8NCX0 1101 aa13.1□□□□□ -0.31
NXF1-211ENST00000531709 KIAA1468Q9P260 1216 aa13.1□□□□□ -0.31
NXF1-211ENST00000531709 SLC12A7Q9Y666 1083 aa13.1□□□□□ -0.31
NXF1-211ENST00000531709 CCP110O43303 1012 aa13.1□□□□□ -0.31
NXF1-211ENST00000531709 CCDC102BQ68D86 513 aa13.1□□□□□ -0.31
NXF1-211ENST00000531709 XAGE2Q96GT9 111 aa13.1□□□□□ -0.31
NXF1-211ENST00000531709 ADD1P35611 737 aaKnown RBP13.1□□□□□ -0.31
NXF1-211ENST00000531709 ZAP70P43403 619 aa13.1□□□□□ -0.31
NXF1-211ENST00000531709 ARHGAP29Q52LW3 1261 aa13.1□□□□□ -0.31
NXF1-211ENST00000531709 ADALQ6DHV7 355 aa13.1□□□□□ -0.31
NXF1-211ENST00000531709 PI16Q6UXB8 463 aa13.1□□□□□ -0.31
NXF1-211ENST00000531709 PLA2G4DQ86XP0 818 aa13.1□□□□□ -0.31
NXF1-211ENST00000531709 ZNF397Q8NF99 534 aaPredicted RBP13.1□□□□□ -0.31
NXF1-211ENST00000531709 MRFAP1L1Q96HT8 127 aa13.1□□□□□ -0.31
NXF1-211ENST00000531709 RIMS1Q86UR5 1692 aaKnown RBP13.09□□□□□ -0.31
NXF1-211ENST00000531709 GNG11P61952 73 aa13.09□□□□□ -0.31
NXF1-211ENST00000531709 ANO1Q5XXA6 986 aa13.09□□□□□ -0.31
NXF1-211ENST00000531709 DSCC1Q9BVC3 393 aa13.09□□□□□ -0.31
NXF1-211ENST00000531709 PODXL2Q9NZ53 605 aa13.09□□□□□ -0.31
NXF1-211ENST00000531709 ITSN1Q15811 1721 aa13.09□□□□□ -0.31
NXF1-211ENST00000531709 CEMIPQ8WUJ3 1361 aa13.09□□□□□ -0.31
NXF1-211ENST00000531709 MINDY4BA8MYZ0 360 aa13.09□□□□□ -0.31
NXF1-211ENST00000531709 FGAP02671 866 aa13.09□□□□□ -0.31
NXF1-211ENST00000531709 TPM1P09493 284 aa13.09□□□□□ -0.31
NXF1-211ENST00000531709 MAPK8IP2Q13387 824 aaPredicted RBP13.09□□□□□ -0.31
NXF1-211ENST00000531709 ERCC6LQ2NKX8 1250 aa13.09□□□□□ -0.31
NXF1-211ENST00000531709 B4E1Z4 1266 aa13.09□□□□□ -0.31
NXF1-211ENST00000531709 MYSM1Q5VVJ2 828 aa13.09□□□□□ -0.31
NXF1-211ENST00000531709 GPAA1O43292 621 aa13.08□□□□□ -0.31
NXF1-211ENST00000531709 ZBTB43O43298 467 aa13.08□□□□□ -0.31
NXF1-211ENST00000531709 MAST3O60307 1309 aa13.08□□□□□ -0.31
NXF1-211ENST00000531709 GTF2E1P29083 439 aaPredicted RBP13.08□□□□□ -0.31
NXF1-211ENST00000531709 ADORA1P30542 326 aa13.08□□□□□ -0.31
NXF1-211ENST00000531709 ABCF2Q9UG63 623 aa13.08□□□□□ -0.31
NXF1-211ENST00000531709 TRMT112Q9UI30 125 aaKnown RBP13.08□□□□□ -0.31
NXF1-211ENST00000531709 FANCCQ00597 558 aa13.08□□□□□ -0.32
NXF1-211ENST00000531709 OSBP2Q969R2 916 aa13.08□□□□□ -0.32
NXF1-211ENST00000531709 MPHOSPH8Q99549 860 aa13.08□□□□□ -0.32
NXF1-211ENST00000531709 ZKSCAN3Q9BRR0 538 aa13.08□□□□□ -0.32
NXF1-211ENST00000531709 GOLGA8FQ08AF8 430 aa13.08□□□□□ -0.32
NXF1-211ENST00000531709 GOLGA8DPQ0D2H9 430 aa13.08□□□□□ -0.32
NXF1-211ENST00000531709 VPS37DQ86XT2 251 aa13.08□□□□□ -0.32
NXF1-211ENST00000531709 CCDC66A2RUB6 948 aa13.07□□□□□ -0.32
NXF1-211ENST00000531709 M0R2C6 588 aa13.07□□□□□ -0.32
NXF1-211ENST00000531709 ZFYP08048 801 aaPredicted RBP13.07□□□□□ -0.32
NXF1-211ENST00000531709 DMTNQ08495 405 aa13.07□□□□□ -0.32
NXF1-211ENST00000531709 ATL3Q6DD88 541 aa13.07□□□□□ -0.32
NXF1-211ENST00000531709 ZNF274Q96GC6 653 aaPredicted RBP13.07□□□□□ -0.32
NXF1-211ENST00000531709 AIFM3Q96NN9 605 aa13.07□□□□□ -0.32
NXF1-211ENST00000531709 SSRP1Q08945 709 aaKnown RBP13.07□□□□□ -0.32
NXF1-211ENST00000531709 PPFIBP1Q86W92 1011 aa13.07□□□□□ -0.32
NXF1-211ENST00000531709 ZCRB1Q8TBF4 217 aaKnown RBP13.07□□□□□ -0.32
NXF1-211ENST00000531709 ERO1AQ96HE7 468 aa13.07□□□□□ -0.32
NXF1-211ENST00000531709 TMOD3Q9NYL9 352 aa13.07□□□□□ -0.32
NXF1-211ENST00000531709 ZSCAN12O43309 604 aa13.07□□□□□ -0.32
NXF1-211ENST00000531709 PFKFB1P16118 471 aa13.07□□□□□ -0.32
NXF1-211ENST00000531709 ZMYM1Q5SVZ6 1142 aa13.07□□□□□ -0.32
NXF1-211ENST00000531709 LRP2BPQ9P2M1 347 aa13.07□□□□□ -0.32
NXF1-211ENST00000531709 IQSEC3Q9UPP2 1182 aaPredicted RBP13.07□□□□□ -0.32
NXF1-211ENST00000531709 CARMIL3Q8ND23 1372 aa13.07□□□□□ -0.32
NXF1-211ENST00000531709 SPATA31D1Q6ZQQ2 1576 aa13.07□□□□□ -0.32
NXF1-211ENST00000531709 GTF2F1P35269 517 aaKnown RBP eCLIP13.07□□□□□ -0.329e-11■■■■□ 23
NXF1-211ENST00000531709 PNOCQ13519 176 aa13.07□□□□□ -0.32
NXF1-211ENST00000531709 PDIA6Q15084 440 aa13.07□□□□□ -0.32
NXF1-211ENST00000531709 BRAPQ7Z569 592 aa13.07□□□□□ -0.32
NXF1-211ENST00000531709 ERBB3P21860 1342 aa13.06□□□□□ -0.32
NXF1-211ENST00000531709 PXDNLA1KZ92 1463 aa13.06□□□□□ -0.32
NXF1-211ENST00000531709 CASQ1P31415 396 aa13.06□□□□□ -0.32
NXF1-211ENST00000531709 CLIC6Q96NY7 704 aa13.06□□□□□ -0.32
NXF1-211ENST00000531709 UBAC1Q9BSL1 405 aa13.06□□□□□ -0.32
NXF1-211ENST00000531709 BMS1Q14692 1282 aaKnown RBP13.06□□□□□ -0.32
NXF1-211ENST00000531709 FBXO18Q8NFZ0 1043 aa13.06□□□□□ -0.32
NXF1-211ENST00000531709 NACAP1Q9BZK3 213 aa13.06□□□□□ -0.32
NXF1-211ENST00000531709 RICTORQ6R327 1708 aa13.06□□□□□ -0.32
NXF1-211ENST00000531709 ANKRD18BA2A2Z9 1011 aa13.06□□□□□ -0.32
NXF1-211ENST00000531709 AFMP43652 599 aa13.06□□□□□ -0.32
NXF1-211ENST00000531709 KCNB2Q92953 911 aa13.06□□□□□ -0.32
NXF1-211ENST00000531709 TNNT3P45378 269 aaPredicted RBP13.05□□□□□ -0.32
NXF1-211ENST00000531709 IQCB1Q15051 598 aa13.05□□□□□ -0.32
NXF1-211ENST00000531709 SKIDA1Q1XH10 827 aa13.05□□□□□ -0.32
NXF1-211ENST00000531709 LINC00301Q8NCQ3 95 aa13.05□□□□□ -0.32
NXF1-211ENST00000531709 NOL10Q9BSC4 688 aaKnown RBP13.05□□□□□ -0.32
NXF1-211ENST00000531709 MED23Q9ULK4 1368 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms