RNA–Protein interactions for RNA: ENST00000530748.5

CTNND1-227, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,925 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-227ENST00000530748 UHRF1BP1Q6BDS2 1440 aa9.62□□□□□ -0.87
CTNND1-227ENST00000530748 TRIM75PA6NK02 468 aa9.62□□□□□ -0.87
CTNND1-227ENST00000530748 HCLS1P14317 486 aaPredicted RBP9.62□□□□□ -0.87
CTNND1-227ENST00000530748 APOBRQ0VD83 1088 aa9.62□□□□□ -0.87
CTNND1-227ENST00000530748 DENND2AQ9ULE3 1009 aa9.62□□□□□ -0.87
CTNND1-227ENST00000530748 COL17A1Q9UMD9 1497 aaPredicted RBP9.62□□□□□ -0.87
CTNND1-227ENST00000530748 CTAGE15A4D2H0 777 aa9.62□□□□□ -0.87
CTNND1-227ENST00000530748 CTAGE8P0CG41 777 aa9.62□□□□□ -0.87
CTNND1-227ENST00000530748 AK2P54819 239 aa9.62□□□□□ -0.87
CTNND1-227ENST00000530748 CTAGE6Q86UF2 777 aa9.62□□□□□ -0.87
CTNND1-227ENST00000530748 CTAGE4Q8IX94 777 aa9.62□□□□□ -0.87
CTNND1-227ENST00000530748 CFAP74Q9C0B2 1584 aa9.62□□□□□ -0.87
CTNND1-227ENST00000530748 DCTPP1Q9H773 170 aa9.62□□□□□ -0.87
CTNND1-227ENST00000530748 LDHBP07195 334 aaKnown RBP9.62□□□□□ -0.87
CTNND1-227ENST00000530748 KRT83P78385 493 aa9.62□□□□□ -0.87
CTNND1-227ENST00000530748 DNM1Q05193 864 aaKnown RBP9.62□□□□□ -0.87
CTNND1-227ENST00000530748 SPAG5Q96R06 1193 aa9.62□□□□□ -0.87
CTNND1-227ENST00000530748 CALCOCO1Q9P1Z2 691 aa9.62□□□□□ -0.87
CTNND1-227ENST00000530748 KRT79Q5XKE5 535 aa9.62□□□□□ -0.87
CTNND1-227ENST00000530748 DYNC1I1O14576 645 aa9.61□□□□□ -0.87
CTNND1-227ENST00000530748 TACC1O75410 805 aa9.61□□□□□ -0.87
CTNND1-227ENST00000530748 PPM1EQ8WY54 764 aa9.61□□□□□ -0.87
CTNND1-227ENST00000530748 CEP63Q96MT8 703 aa9.61□□□□□ -0.87
CTNND1-227ENST00000530748 MCM9Q9NXL9 1143 aa9.61□□□□□ -0.87
CTNND1-227ENST00000530748 IP6K1Q92551 441 aa9.61□□□□□ -0.87
CTNND1-227ENST00000530748 TSGA10Q9BZW7 698 aa9.61□□□□□ -0.87
CTNND1-227ENST00000530748 NSRP1Q9H0G5 558 aaKnown RBP9.61□□□□□ -0.87
CTNND1-227ENST00000530748 VAMP4O75379 141 aa9.61□□□□□ -0.87
CTNND1-227ENST00000530748 PARP1P09874 1014 aaKnown RBP9.61□□□□□ -0.87
CTNND1-227ENST00000530748 MCM7P33993 719 aa9.61□□□□□ -0.87
CTNND1-227ENST00000530748 C8orf34Q49A92 452 aa9.61□□□□□ -0.87
CTNND1-227ENST00000530748 STMN4Q9H169 189 aaPredicted RBP9.61□□□□□ -0.87
CTNND1-227ENST00000530748 DNAJC25Q9H1X3 360 aa9.61□□□□□ -0.87
CTNND1-227ENST00000530748 EDC4Q6P2E9 1401 aaKnown RBP9.61□□□□□ -0.87
CTNND1-227ENST00000530748 KDM5AP29375 1690 aaKnown RBP9.61□□□□□ -0.87
CTNND1-227ENST00000530748 A0A1W2PRG0 241 aa9.61□□□□□ -0.87
CTNND1-227ENST00000530748 PTPDC1A2A3K4 754 aa9.61□□□□□ -0.87
CTNND1-227ENST00000530748 SYT1P21579 422 aa9.61□□□□□ -0.87
CTNND1-227ENST00000530748 GNA11P29992 359 aa9.61□□□□□ -0.87
CTNND1-227ENST00000530748 CWF19L2Q2TBE0 894 aaKnown RBP9.61□□□□□ -0.87
CTNND1-227ENST00000530748 MIGA1Q8NAN2 632 aa9.61□□□□□ -0.87
CTNND1-227ENST00000530748 PODXL2Q9NZ53 605 aa9.61□□□□□ -0.87
CTNND1-227ENST00000530748 CTAGE9A4FU28 777 aa9.61□□□□□ -0.87
CTNND1-227ENST00000530748 IMPG2Q9BZV3 1241 aa9.61□□□□□ -0.87
CTNND1-227ENST00000530748 VEZTQ9HBM0 779 aa9.61□□□□□ -0.87
CTNND1-227ENST00000530748 BABAM1Q9NWV8 329 aa9.61□□□□□ -0.87
CTNND1-227ENST00000530748 ABCC2Q92887 1545 aa9.61□□□□□ -0.87
CTNND1-227ENST00000530748 ABCA5Q8WWZ7 1642 aa9.61□□□□□ -0.87
CTNND1-227ENST00000530748 DACT1Q9NYF0 836 aa9.6□□□□□ -0.87
CTNND1-227ENST00000530748 SSX2IPQ9Y2D8 614 aa9.6□□□□□ -0.87
CTNND1-227ENST00000530748 ATP7AQ04656 1500 aa9.6□□□□□ -0.87
CTNND1-227ENST00000530748 SBNO1A3KN83 1393 aa9.6□□□□□ -0.87
CTNND1-227ENST00000530748 NCKAP5LQ9HCH0 1330 aa9.6□□□□□ -0.87
CTNND1-227ENST00000530748 SKILP12757 684 aa9.6□□□□□ -0.87
CTNND1-227ENST00000530748 UBXN1Q04323 297 aa9.6□□□□□ -0.87
CTNND1-227ENST00000530748 PLS1Q14651 629 aa9.6□□□□□ -0.87
CTNND1-227ENST00000530748 C6orf163Q5TEZ5 329 aa9.6□□□□□ -0.87
CTNND1-227ENST00000530748 DHX32Q7L7V1 743 aaKnown RBP9.6□□□□□ -0.87
CTNND1-227ENST00000530748 NEK11Q8NG66 645 aa9.6□□□□□ -0.87
CTNND1-227ENST00000530748 TCEANC2Q96MN5 208 aa9.6□□□□□ -0.87
CTNND1-227ENST00000530748 NCBP1Q09161 790 aaKnown RBP9.6□□□□□ -0.87
CTNND1-227ENST00000530748 ATL3Q6DD88 541 aa9.6□□□□□ -0.87
CTNND1-227ENST00000530748 PPP1R14CQ8TAE6 165 aa9.6□□□□□ -0.87
CTNND1-227ENST00000530748 PRDM10Q9NQV6 1147 aa9.6□□□□□ -0.87
CTNND1-227ENST00000530748 TMEM110-MUSTN1A8MSY1 372 aa9.6□□□□□ -0.87
CTNND1-227ENST00000530748 POLD1P28340 1107 aa9.6□□□□□ -0.87
CTNND1-227ENST00000530748 AOX1Q06278 1338 aa9.6□□□□□ -0.87
CTNND1-227ENST00000530748 UBAP1LF5GYI3 381 aa9.6□□□□□ -0.87
CTNND1-227ENST00000530748 RAB3GAP1Q15042 981 aa9.6□□□□□ -0.87
CTNND1-227ENST00000530748 EYA1Q99502 592 aa9.6□□□□□ -0.87
CTNND1-227ENST00000530748 SLTMQ9NWH9 1034 aaKnown RBP eCLIP9.6□□□□□ -0.87
CTNND1-227ENST00000530748 SBNO2Q9Y2G9 1366 aa9.59□□□□□ -0.87
CTNND1-227ENST00000530748 RIMBP2O15034 1052 aa9.59□□□□□ -0.87
CTNND1-227ENST00000530748 CHMLP26374 656 aa9.59□□□□□ -0.87
CTNND1-227ENST00000530748 TNNI2P48788 182 aa9.59□□□□□ -0.87
CTNND1-227ENST00000530748 TYRO3Q06418 890 aa9.59□□□□□ -0.87
CTNND1-227ENST00000530748 PLEKHM2Q8IWE5 1019 aa9.59□□□□□ -0.87
CTNND1-227ENST00000530748 RGS22Q8NE09 1264 aa9.59□□□□□ -0.87
CTNND1-227ENST00000530748 SRRTQ9BXP5 876 aaKnown RBP9.59□□□□□ -0.87
CTNND1-227ENST00000530748 C19orf44Q9H6X5 657 aa9.59□□□□□ -0.87
CTNND1-227ENST00000530748 PLBD2Q8NHP8 589 aa9.59□□□□□ -0.87
CTNND1-227ENST00000530748 CDCA7Q9BWT1 371 aaPredicted RBP9.59□□□□□ -0.87
CTNND1-227ENST00000530748 OPA1O60313 960 aa9.59□□□□□ -0.87
CTNND1-227ENST00000530748 DTHD1Q6ZMT9 781 aa9.59□□□□□ -0.87
CTNND1-227ENST00000530748 TSPYL6Q8N831 410 aa9.59□□□□□ -0.87
CTNND1-227ENST00000530748 MSANTD4Q8NCY6 345 aa9.59□□□□□ -0.87
CTNND1-227ENST00000530748 GOLGA1Q92805 767 aa9.59□□□□□ -0.87
CTNND1-227ENST00000530748 INTS4Q96HW7 963 aaKnown RBP9.59□□□□□ -0.87
CTNND1-227ENST00000530748 ELP1O95163 1332 aa9.59□□□□□ -0.87
CTNND1-227ENST00000530748 RPS6KB1P23443 525 aa9.59□□□□□ -0.87
CTNND1-227ENST00000530748 GSTA5Q7RTV2 222 aa9.59□□□□□ -0.87
CTNND1-227ENST00000530748 ZNF354CQ86Y25 554 aa9.59□□□□□ -0.87
CTNND1-227ENST00000530748 SMC5Q8IY18 1101 aa9.59□□□□□ -0.87
CTNND1-227ENST00000530748 CABLES1Q8TDN4 633 aa9.59□□□□□ -0.87
CTNND1-227ENST00000530748 SH2D4AQ9H788 454 aa9.59□□□□□ -0.87
CTNND1-227ENST00000530748 CA8P35219 290 aa9.58□□□□□ -0.88
CTNND1-227ENST00000530748 NOLC1Q14978 699 aaKnown RBP eCLIP9.58□□□□□ -0.88
CTNND1-227ENST00000530748 CCDC129Q6ZRS4 1044 aa9.58□□□□□ -0.88
CTNND1-227ENST00000530748 CHST3Q7LGC8 479 aa9.58□□□□□ -0.88
CTNND1-227ENST00000530748 ZBTB40Q9NUA8 1239 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms