RNA–Protein interactions for RNA: ENST00000530563.1

TM9SF1-210, Transcript of transmembrane 9 superfamily member 1, humanhuman

TSL 3

Gene TM9SF1, Length 721 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF1-210ENST00000530563 IFT57Q9NWB7 429 aa13.77□□□□□ -0.21
TM9SF1-210ENST00000530563 PPP2R3BQ9Y5P8 575 aa13.77□□□□□ -0.21
TM9SF1-210ENST00000530563 SPEF2Q9C093 1822 aa13.76□□□□□ -0.21
TM9SF1-210ENST00000530563 SNAP23O00161 211 aa13.76□□□□□ -0.21
TM9SF1-210ENST00000530563 PPP1R12BO60237 982 aaPredicted RBP13.76□□□□□ -0.21
TM9SF1-210ENST00000530563 CASP7P55210 303 aa13.76□□□□□ -0.21
TM9SF1-210ENST00000530563 SP3Q02447 781 aa13.76□□□□□ -0.21
TM9SF1-210ENST00000530563 DLGAP5Q15398 846 aa13.76□□□□□ -0.21
TM9SF1-210ENST00000530563 CWF19L2Q2TBE0 894 aaKnown RBP13.76□□□□□ -0.21
TM9SF1-210ENST00000530563 MS4A4AQ96JQ5 239 aa13.76□□□□□ -0.21
TM9SF1-210ENST00000530563 PRMT6Q96LA8 375 aaPredicted RBP13.76□□□□□ -0.21
TM9SF1-210ENST00000530563 SPDYE2BA6NHP3 402 aa13.75□□□□□ -0.21
TM9SF1-210ENST00000530563 NEURL1BA8MQ27 555 aa13.75□□□□□ -0.21
TM9SF1-210ENST00000530563 DDX58O95786 925 aaKnown RBP13.75□□□□□ -0.21
TM9SF1-210ENST00000530563 CSF1RP07333 972 aa13.75□□□□□ -0.21
TM9SF1-210ENST00000530563 SPDYE6P0CI01 402 aa13.75□□□□□ -0.21
TM9SF1-210ENST00000530563 C15orf52Q6ZUT6 534 aaKnown RBP13.75□□□□□ -0.21
TM9SF1-210ENST00000530563 TSPYL6Q8N831 410 aa13.75□□□□□ -0.21
TM9SF1-210ENST00000530563 PLA2G12BQ9BX93 195 aa13.75□□□□□ -0.21
TM9SF1-210ENST00000530563 ANKRD2Q9GZV1 360 aa13.75□□□□□ -0.21
TM9SF1-210ENST00000530563 MYBBP1AQ9BQG0 1328 aaKnown RBP13.74□□□□□ -0.21
TM9SF1-210ENST00000530563 ITGA6P23229 1130 aa13.74□□□□□ -0.21
TM9SF1-210ENST00000530563 GNAI1P63096 354 aa13.74□□□□□ -0.21
TM9SF1-210ENST00000530563 SUPT20HL1Q3ZLR7 823 aa13.74□□□□□ -0.21
TM9SF1-210ENST00000530563 OTUD5Q96G74 571 aa13.74□□□□□ -0.21
TM9SF1-210ENST00000530563 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.74□□□□□ -0.21
TM9SF1-210ENST00000530563 MYH3P11055 1940 aa13.74□□□□□ -0.21
TM9SF1-210ENST00000530563 CLRN2A0PK11 232 aa13.73□□□□□ -0.21
TM9SF1-210ENST00000530563 IL1R1P14778 569 aa13.73□□□□□ -0.21
TM9SF1-210ENST00000530563 IGHMBP2P38935 993 aaKnown RBP13.73□□□□□ -0.21
TM9SF1-210ENST00000530563 IREB2P48200 963 aaKnown RBP13.73□□□□□ -0.21
TM9SF1-210ENST00000530563 CHRNDQ07001 517 aa13.73□□□□□ -0.21
TM9SF1-210ENST00000530563 CFAP100Q494V2 611 aa13.73□□□□□ -0.21
TM9SF1-210ENST00000530563 CCDC30Q5VVM6 783 aa13.73□□□□□ -0.21
TM9SF1-210ENST00000530563 OTUD7BQ6GQQ9 843 aa13.73□□□□□ -0.21
TM9SF1-210ENST00000530563 UBE3BQ7Z3V4 1068 aa13.73□□□□□ -0.21
TM9SF1-210ENST00000530563 ANKRD13AQ8IZ07 590 aa13.73□□□□□ -0.21
TM9SF1-210ENST00000530563 BRI3BPQ8WY22 251 aa13.73□□□□□ -0.21
TM9SF1-210ENST00000530563 PTCH2Q9Y6C5 1203 aa13.73□□□□□ -0.21
TM9SF1-210ENST00000530563 FKBP1AP62942 108 aaKnown RBP13.72□□□□□ -0.21
TM9SF1-210ENST00000530563 RASA3Q14644 834 aa13.72□□□□□ -0.21
TM9SF1-210ENST00000530563 WDR43Q15061 677 aaKnown RBP eCLIP13.72□□□□□ -0.21
TM9SF1-210ENST00000530563 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.72□□□□□ -0.21
TM9SF1-210ENST00000530563 G2E3Q7L622 706 aa13.72□□□□□ -0.21
TM9SF1-210ENST00000530563 TEPSINQ96N21 525 aa13.72□□□□□ -0.21
TM9SF1-210ENST00000530563 ECM29Q5VYK3 1845 aa13.71□□□□□ -0.21
TM9SF1-210ENST00000530563 H0YGN5 161 aa13.71□□□□□ -0.21
TM9SF1-210ENST00000530563 APAF1O14727 1248 aa13.71□□□□□ -0.21
TM9SF1-210ENST00000530563 TAF5LO75529 589 aa13.71□□□□□ -0.21
TM9SF1-210ENST00000530563 GCKRQ14397 625 aa13.71□□□□□ -0.21
TM9SF1-210ENST00000530563 CDAN1Q8IWY9 1227 aa13.71□□□□□ -0.21
TM9SF1-210ENST00000530563 CNKSR2Q8WXI2 1034 aa13.71□□□□□ -0.21
TM9SF1-210ENST00000530563 TMEM106CQ9BVX2 250 aa13.71□□□□□ -0.21
TM9SF1-210ENST00000530563 ELP3Q9H9T3 547 aa13.71□□□□□ -0.21
TM9SF1-210ENST00000530563 F8W031 263 aaPredicted RBP13.7□□□□□ -0.22
TM9SF1-210ENST00000530563 NEXNQ0ZGT2 675 aa13.7□□□□□ -0.22
TM9SF1-210ENST00000530563 HELBQ8NG08 1087 aaPredicted RBP13.7□□□□□ -0.22
TM9SF1-210ENST00000530563 OPTNQ96CV9 577 aa13.7□□□□□ -0.22
TM9SF1-210ENST00000530563 MPHOSPH8Q99549 860 aa13.7□□□□□ -0.22
TM9SF1-210ENST00000530563 VEZTQ9HBM0 779 aa13.7□□□□□ -0.22
TM9SF1-210ENST00000530563 OTOFQ9HC10 1997 aa13.7□□□□□ -0.22
TM9SF1-210ENST00000530563 MYO1BO43795 1136 aa13.69□□□□□ -0.22
TM9SF1-210ENST00000530563 SLC9C1Q4G0N8 1177 aa13.69□□□□□ -0.22
TM9SF1-210ENST00000530563 FAM43AQ8N2R8 423 aa13.69□□□□□ -0.22
TM9SF1-210ENST00000530563 ARHGAP39Q9C0H5 1083 aa13.69□□□□□ -0.22
TM9SF1-210ENST00000530563 ZNF70Q9UC06 446 aaPredicted RBP13.69□□□□□ -0.22
TM9SF1-210ENST00000530563 CUL9Q8IWT3 2517 aa13.69□□□□□ -0.22
TM9SF1-210ENST00000530563 KCNJ4P48050 445 aa13.68□□□□□ -0.22
TM9SF1-210ENST00000530563 FOXO4P98177 505 aa13.68□□□□□ -0.22
TM9SF1-210ENST00000530563 CALD1Q05682 793 aaKnown RBP13.68□□□□□ -0.22
TM9SF1-210ENST00000530563 SPDYE2Q495Y8 402 aa13.68□□□□□ -0.22
TM9SF1-210ENST00000530563 NBPF11Q86T75 865 aa13.68□□□□□ -0.22
TM9SF1-210ENST00000530563 CHMP4AQ9BY43 222 aa13.68□□□□□ -0.22
TM9SF1-210ENST00000530563 JAG2Q9Y219 1238 aa13.68□□□□□ -0.22
TM9SF1-210ENST00000530563 FAM205AQ6ZU69 1335 aa13.67□□□□□ -0.22
TM9SF1-210ENST00000530563 CCL15-CCL14A0A0B4J2E2 113 aa13.67□□□□□ -0.22
TM9SF1-210ENST00000530563 VGLL4Q14135 290 aa13.67□□□□□ -0.22
TM9SF1-210ENST00000530563 TAF1CQ15572 869 aaPredicted RBP13.67□□□□□ -0.22
TM9SF1-210ENST00000530563 CCL15Q16663 113 aa13.67□□□□□ -0.22
TM9SF1-210ENST00000530563 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.67□□□□□ -0.22
TM9SF1-210ENST00000530563 SH3TC2Q8TF17 1288 aa13.67□□□□□ -0.22
TM9SF1-210ENST00000530563 SHISA4Q96DD7 197 aa13.67□□□□□ -0.22
TM9SF1-210ENST00000530563 PRO3102Q9H379 93 aa13.67□□□□□ -0.22
TM9SF1-210ENST00000530563 ZFYVE28Q9HCC9 887 aa13.67□□□□□ -0.22
TM9SF1-210ENST00000530563 A0A1B0GUL6 1792 aa13.66□□□□□ -0.22
TM9SF1-210ENST00000530563 GTF2A2P52657 109 aa13.66□□□□□ -0.22
TM9SF1-210ENST00000530563 SLC4A8Q2Y0W8 1093 aa13.66□□□□□ -0.22
TM9SF1-210ENST00000530563 ZNF804AQ7Z570 1209 aa13.66□□□□□ -0.22
TM9SF1-210ENST00000530563 UBE2Q1Q7Z7E8 422 aa13.66□□□□□ -0.22
TM9SF1-210ENST00000530563 TSR2Q969E8 191 aaKnown RBP13.66□□□□□ -0.22
TM9SF1-210ENST00000530563 TDRD3Q9H7E2 651 aaKnown RBP13.66□□□□□ -0.22
TM9SF1-210ENST00000530563 SERPINA10Q9UK55 444 aa13.66□□□□□ -0.22
TM9SF1-210ENST00000530563 ZSWIM8A7E2V4 1837 aa13.65□□□□□ -0.22
TM9SF1-210ENST00000530563 ANKRD18BA2A2Z9 1011 aa13.65□□□□□ -0.22
TM9SF1-210ENST00000530563 TLR2O60603 784 aa13.65□□□□□ -0.22
TM9SF1-210ENST00000530563 MYCP01106 439 aaPredicted RBP13.65□□□□□ -0.22
TM9SF1-210ENST00000530563 SLC4A2P04920 1241 aa13.65□□□□□ -0.22
TM9SF1-210ENST00000530563 CTGFP29279 349 aa13.65□□□□□ -0.22
TM9SF1-210ENST00000530563 RBM5P52756 815 aaKnown RBP eCLIP13.65□□□□□ -0.22
TM9SF1-210ENST00000530563 MAP3K9P80192 1104 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms