RNA–Protein interactions for RNA: ENST00000529928.1

COL16A1-216, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 3

Gene COL16A1, Length 581 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-216ENST00000529928 CERS5Q8N5B7 392 aa20.52■□□□□ 0.88
COL16A1-216ENST00000529928 WNK4Q96J92 1243 aa20.52■□□□□ 0.88
COL16A1-216ENST00000529928 LAMB1P07942 1786 aa20.51■□□□□ 0.87
COL16A1-216ENST00000529928 SSC5DA1L4H1 1573 aa20.51■□□□□ 0.87
COL16A1-216ENST00000529928 ECM29Q5VYK3 1845 aa20.51■□□□□ 0.87
COL16A1-216ENST00000529928 CCDC27Q2M243 656 aa20.51■□□□□ 0.87
COL16A1-216ENST00000529928 SUPT20HL1Q3ZLR7 823 aa20.51■□□□□ 0.87
COL16A1-216ENST00000529928 OTOP1Q7RTM1 612 aa20.51■□□□□ 0.87
COL16A1-216ENST00000529928 ZNF804AQ7Z570 1209 aa20.51■□□□□ 0.87
COL16A1-216ENST00000529928 LINS1Q8NG48 757 aa20.51■□□□□ 0.87
COL16A1-216ENST00000529928 DNAAF4Q8WXU2 420 aa20.51■□□□□ 0.87
COL16A1-216ENST00000529928 CLMNQ96JQ2 1002 aa20.51■□□□□ 0.87
COL16A1-216ENST00000529928 IRS2Q9Y4H2 1338 aa20.51■□□□□ 0.87
COL16A1-216ENST00000529928 SPDYE2BA6NHP3 402 aa20.5■□□□□ 0.87
COL16A1-216ENST00000529928 SPDYE6P0CI01 402 aa20.5■□□□□ 0.87
COL16A1-216ENST00000529928 FKBP1AP62942 108 aaKnown RBP20.5■□□□□ 0.87
COL16A1-216ENST00000529928 FKBP5Q13451 457 aaPredicted RBP20.5■□□□□ 0.87
COL16A1-216ENST00000529928 ZBTB4Q9P1Z0 1013 aaPredicted RBP20.5■□□□□ 0.87
COL16A1-216ENST00000529928 IGF2BP3O00425 579 aaKnown RBP eCLIP20.49■□□□□ 0.87
COL16A1-216ENST00000529928 TAF5LO75529 589 aa20.49■□□□□ 0.87
COL16A1-216ENST00000529928 IL1R1P14778 569 aa20.49■□□□□ 0.87
COL16A1-216ENST00000529928 IREB2P48200 963 aaKnown RBP20.49■□□□□ 0.87
COL16A1-216ENST00000529928 CFAP100Q494V2 611 aa20.49■□□□□ 0.87
COL16A1-216ENST00000529928 OTUD7BQ6GQQ9 843 aa20.49■□□□□ 0.87
COL16A1-216ENST00000529928 ERO1AQ96HE7 468 aa20.49■□□□□ 0.87
COL16A1-216ENST00000529928 CLRN2A0PK11 232 aa20.48■□□□□ 0.87
COL16A1-216ENST00000529928 F8W031 263 aaPredicted RBP20.48■□□□□ 0.87
COL16A1-216ENST00000529928 SNAP23O00161 211 aa20.48■□□□□ 0.87
COL16A1-216ENST00000529928 IFIT5Q13325 482 aaKnown RBP20.48■□□□□ 0.87
COL16A1-216ENST00000529928 WWC1Q8IX03 1113 aa20.48■□□□□ 0.87
COL16A1-216ENST00000529928 HELBQ8NG08 1087 aaPredicted RBP20.48■□□□□ 0.87
COL16A1-216ENST00000529928 VEZTQ9HBM0 779 aa20.48■□□□□ 0.87
COL16A1-216ENST00000529928 PCDHAC2Q9Y5I4 1007 aa20.48■□□□□ 0.87
COL16A1-216ENST00000529928 PRMT6Q96LA8 375 aaPredicted RBP20.47■□□□□ 0.87
COL16A1-216ENST00000529928 IL16Q14005 1332 aa20.47■□□□□ 0.87
COL16A1-216ENST00000529928 NBPF12Q5TAG4 269 aaPredicted RBP20.46■□□□□ 0.87
COL16A1-216ENST00000529928 ANKRD13AQ8IZ07 590 aa20.46■□□□□ 0.87
COL16A1-216ENST00000529928 PTPN22Q9Y2R2 807 aa20.46■□□□□ 0.87
COL16A1-216ENST00000529928 A0A1B0GUL6 1792 aa20.45■□□□□ 0.86
COL16A1-216ENST00000529928 USP2O75604 605 aaPredicted RBP20.45■□□□□ 0.86
COL16A1-216ENST00000529928 RBM5P52756 815 aaKnown RBP eCLIP20.45■□□□□ 0.86
COL16A1-216ENST00000529928 FOXO4P98177 505 aa20.45■□□□□ 0.86
COL16A1-216ENST00000529928 CRHR2Q13324 411 aa20.45■□□□□ 0.86
COL16A1-216ENST00000529928 TNFAIP1Q13829 316 aa20.45■□□□□ 0.86
COL16A1-216ENST00000529928 CHMP3Q9Y3E7 222 aa20.45■□□□□ 0.86
COL16A1-216ENST00000529928 POTEFA5A3E0 1075 aa20.44■□□□□ 0.86
COL16A1-216ENST00000529928 RASA3Q14644 834 aa20.44■□□□□ 0.86
COL16A1-216ENST00000529928 CD99L2Q8TCZ2 262 aa20.44■□□□□ 0.86
COL16A1-216ENST00000529928 TESPA1A2RU30 521 aaPredicted RBP20.43■□□□□ 0.86
COL16A1-216ENST00000529928 GJA5P36382 358 aa20.43■□□□□ 0.86
COL16A1-216ENST00000529928 ZEB1P37275 1124 aaPredicted RBP20.43■□□□□ 0.86
COL16A1-216ENST00000529928 EFCC1Q9HA90 598 aa20.43■□□□□ 0.86
COL16A1-216ENST00000529928 RBBP6Q7Z6E9 1792 aaKnown RBP20.43■□□□□ 0.86
COL16A1-216ENST00000529928 CACNA1FO60840 1977 aa20.43■□□□□ 0.86
COL16A1-216ENST00000529928 HTTP42858 3142 aa20.42■□□□□ 0.86
COL16A1-216ENST00000529928 SP3Q02447 781 aa20.42■□□□□ 0.86
COL16A1-216ENST00000529928 CCDC57Q2TAC2 916 aa20.42■□□□□ 0.86
COL16A1-216ENST00000529928 LDHAL6AQ6ZMR3 332 aa20.42■□□□□ 0.86
COL16A1-216ENST00000529928 ARMC5Q96C12 935 aa20.42■□□□□ 0.86
COL16A1-216ENST00000529928 JAG2Q9Y219 1238 aa20.42■□□□□ 0.86
COL16A1-216ENST00000529928 AOX1Q06278 1338 aa20.42■□□□□ 0.86
COL16A1-216ENST00000529928 SPDYE2Q495Y8 402 aa20.41■□□□□ 0.86
COL16A1-216ENST00000529928 NCBP3Q53F19 620 aaKnown RBP20.41■□□□□ 0.86
COL16A1-216ENST00000529928 TAF7LQ5H9L4 462 aa20.41■□□□□ 0.86
COL16A1-216ENST00000529928 LMBR1LQ6UX01 489 aa20.41■□□□□ 0.86
COL16A1-216ENST00000529928 OPTNQ96CV9 577 aa20.41■□□□□ 0.86
COL16A1-216ENST00000529928 PTPN18Q99952 460 aa20.41■□□□□ 0.86
COL16A1-216ENST00000529928 FAM205AQ6ZU69 1335 aa20.41■□□□□ 0.86
COL16A1-216ENST00000529928 FANCIQ9NVI1 1328 aa20.41■□□□□ 0.86
COL16A1-216ENST00000529928 PLIN1O60240 522 aa20.4■□□□□ 0.86
COL16A1-216ENST00000529928 HABP4Q5JVS0 413 aaKnown RBP20.4■□□□□ 0.86
COL16A1-216ENST00000529928 MFSD14BQ5SR56 506 aa20.4■□□□□ 0.86
COL16A1-216ENST00000529928 BEND3Q5T5X7 828 aa20.4■□□□□ 0.86
COL16A1-216ENST00000529928 ELP3Q9H9T3 547 aa20.4■□□□□ 0.86
COL16A1-216ENST00000529928 CNNM1Q9NRU3 951 aa20.4■□□□□ 0.86
COL16A1-216ENST00000529928 SERPINA10Q9UK55 444 aa20.4■□□□□ 0.86
COL16A1-216ENST00000529928 VAMP4O75379 141 aa20.39■□□□□ 0.85
COL16A1-216ENST00000529928 ZNF594Q96JF6 807 aaPredicted RBP20.39■□□□□ 0.85
COL16A1-216ENST00000529928 MS4A4AQ96JQ5 239 aa20.39■□□□□ 0.85
COL16A1-216ENST00000529928 ZNF70Q9UC06 446 aaPredicted RBP20.39■□□□□ 0.85
COL16A1-216ENST00000529928 OTOFQ9HC10 1997 aa20.39■□□□□ 0.85
COL16A1-216ENST00000529928 F6X3S4 739 aa20.38■□□□□ 0.85
COL16A1-216ENST00000529928 ARHGEF6Q15052 776 aa20.38■□□□□ 0.85
COL16A1-216ENST00000529928 TDRD7Q8NHU6 1098 aaKnown RBP20.38■□□□□ 0.85
COL16A1-216ENST00000529928 TDRD3Q9H7E2 651 aaKnown RBP20.38■□□□□ 0.85
COL16A1-216ENST00000529928 TTF2Q9UNY4 1162 aaKnown RBP20.38■□□□□ 0.85
COL16A1-216ENST00000529928 GRM8O00222 908 aa20.37■□□□□ 0.85
COL16A1-216ENST00000529928 UBE4AQ14139 1066 aa20.37■□□□□ 0.85
COL16A1-216ENST00000529928 EPHA10Q5JZY3 1008 aa20.37■□□□□ 0.85
COL16A1-216ENST00000529928 TMEM106CQ9BVX2 250 aa20.37■□□□□ 0.85
COL16A1-216ENST00000529928 MKI67P46013 3256 aaKnown RBP20.37■□□□□ 0.85
COL16A1-216ENST00000529928 EN2P19622 333 aaPredicted RBP20.36■□□□□ 0.85
COL16A1-216ENST00000529928 HIBADHP31937 336 aaKnown RBP20.36■□□□□ 0.85
COL16A1-216ENST00000529928 TNNI2P48788 182 aa20.36■□□□□ 0.85
COL16A1-216ENST00000529928 GTF2A2P52657 109 aa20.36■□□□□ 0.85
COL16A1-216ENST00000529928 CCDC184Q52MB2 194 aa20.36■□□□□ 0.85
COL16A1-216ENST00000529928 PPP1R3FQ6ZSY5 799 aaPredicted RBP20.36■□□□□ 0.85
COL16A1-216ENST00000529928 DZIP1LQ8IYY4 767 aaKnown RBP20.36■□□□□ 0.85
COL16A1-216ENST00000529928 TEPSINQ96N21 525 aa20.36■□□□□ 0.85
COL16A1-216ENST00000529928 ZFYVE28Q9HCC9 887 aa20.36■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms