RNA–Protein interactions for RNA: ENST00000529813.1

USP47-208, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 2

Gene USP47, Length 3,123 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-208ENST00000529813 KIF13BQ9NQT8 1826 aa5.7□□□□□ -1.5
USP47-208ENST00000529813 MYO1BO43795 1136 aa5.7□□□□□ -1.5
USP47-208ENST00000529813 VIL1P09327 827 aaKnown RBP5.7□□□□□ -1.5
USP47-208ENST00000529813 PHKA1P46020 1223 aa5.7□□□□□ -1.5
USP47-208ENST00000529813 CACNB3P54284 484 aa5.7□□□□□ -1.5
USP47-208ENST00000529813 DACT2Q5SW24 774 aa5.7□□□□□ -1.5
USP47-208ENST00000529813 STRIP1Q5VSL9 837 aa5.7□□□□□ -1.5
USP47-208ENST00000529813 CDC37L1Q7L3B6 337 aa5.7□□□□□ -1.5
USP47-208ENST00000529813 LPIN2Q92539 896 aa5.7□□□□□ -1.5
USP47-208ENST00000529813 DDX19BQ9UMR2 479 aa5.7□□□□□ -1.5
USP47-208ENST00000529813 COL24A1Q17RW2 1714 aa5.7□□□□□ -1.5
USP47-208ENST00000529813 MED23Q9ULK4 1368 aa5.7□□□□□ -1.5
USP47-208ENST00000529813 A0A1B0GUL7 405 aa5.7□□□□□ -1.5
USP47-208ENST00000529813 TMEM88BA6NKF7 163 aa5.7□□□□□ -1.5
USP47-208ENST00000529813 TCP10L2B9ZVM9 353 aa5.7□□□□□ -1.5
USP47-208ENST00000529813 RPS12P25398 132 aaKnown RBP5.7□□□□□ -1.5
USP47-208ENST00000529813 HUNKP57058 714 aa5.7□□□□□ -1.5
USP47-208ENST00000529813 MVPQ14764 893 aaKnown RBP5.7□□□□□ -1.5
USP47-208ENST00000529813 CFAP100Q494V2 611 aa5.7□□□□□ -1.5
USP47-208ENST00000529813 AGBL3Q8NEM8 1001 aa5.7□□□□□ -1.5
USP47-208ENST00000529813 DPF2Q92785 391 aa5.7□□□□□ -1.5
USP47-208ENST00000529813 RAI14Q9P0K7 980 aa5.7□□□□□ -1.5
USP47-208ENST00000529813 KIAA1551Q9HCM1 1747 aa5.69□□□□□ -1.5
USP47-208ENST00000529813 UTYO14607 1347 aa5.69□□□□□ -1.5
USP47-208ENST00000529813 COL4A5P29400 1685 aa5.69□□□□□ -1.5
USP47-208ENST00000529813 HMMRO75330 724 aa5.69□□□□□ -1.5
USP47-208ENST00000529813 RFX5P48382 616 aaPredicted RBP5.69□□□□□ -1.5
USP47-208ENST00000529813 TTC39AQ5SRH9 613 aa5.69□□□□□ -1.5
USP47-208ENST00000529813 ATG9AQ7Z3C6 839 aa5.69□□□□□ -1.5
USP47-208ENST00000529813 TDRD3Q9H7E2 651 aaKnown RBP5.69□□□□□ -1.5
USP47-208ENST00000529813 FZD1Q9UP38 647 aa5.69□□□□□ -1.5
USP47-208ENST00000529813 SUPT16HQ9Y5B9 1047 aaKnown RBP5.69□□□□□ -1.5
USP47-208ENST00000529813 COL4A1P02462 1669 aa5.69□□□□□ -1.5
USP47-208ENST00000529813 ZBTB7BO15156 539 aaPredicted RBP5.69□□□□□ -1.5
USP47-208ENST00000529813 NPM3O75607 178 aaKnown RBP5.69□□□□□ -1.5
USP47-208ENST00000529813 BRPF1P55201 1214 aaPredicted RBP5.69□□□□□ -1.5
USP47-208ENST00000529813 ATP8B2P98198 1209 aa5.69□□□□□ -1.5
USP47-208ENST00000529813 DEFB115Q30KQ5 88 aa5.69□□□□□ -1.5
USP47-208ENST00000529813 CYP4F22Q6NT55 531 aa5.69□□□□□ -1.5
USP47-208ENST00000529813 PI16Q6UXB8 463 aa5.69□□□□□ -1.5
USP47-208ENST00000529813 TBC1D9Q6ZT07 1266 aa5.69□□□□□ -1.5
USP47-208ENST00000529813 MOB2Q70IA6 237 aa5.69□□□□□ -1.5
USP47-208ENST00000529813 DZIP1Q86YF9 867 aaKnown RBP5.69□□□□□ -1.5
USP47-208ENST00000529813 ZSCAN29Q8IWY8 852 aaPredicted RBP5.69□□□□□ -1.5
USP47-208ENST00000529813 CERS5Q8N5B7 392 aa5.69□□□□□ -1.5
USP47-208ENST00000529813 XAGE2Q96GT9 111 aa5.69□□□□□ -1.5
USP47-208ENST00000529813 TMOD2Q9NZR1 351 aa5.69□□□□□ -1.5
USP47-208ENST00000529813 AKAP2Q9Y2D5 859 aa5.69□□□□□ -1.5
USP47-208ENST00000529813 NF2P35240 595 aa5.68□□□□□ -1.5
USP47-208ENST00000529813 TCP10Q12799 353 aa5.68□□□□□ -1.5
USP47-208ENST00000529813 DIXDC1Q155Q3 683 aa5.68□□□□□ -1.5
USP47-208ENST00000529813 CCDC102BQ68D86 513 aa5.68□□□□□ -1.5
USP47-208ENST00000529813 AACSQ86V21 672 aa5.68□□□□□ -1.5
USP47-208ENST00000529813 C2orf69Q8N8R5 385 aa5.68□□□□□ -1.5
USP47-208ENST00000529813 BEGAINQ9BUH8 593 aa5.68□□□□□ -1.5
USP47-208ENST00000529813 LRP2BPQ9P2M1 347 aa5.68□□□□□ -1.5
USP47-208ENST00000529813 NDUFB9Q9Y6M9 179 aa5.68□□□□□ -1.5
USP47-208ENST00000529813 CCDC88AQ3V6T2 1871 aa5.68□□□□□ -1.5
USP47-208ENST00000529813 UBE2Q2LH0YL09 131 aa5.68□□□□□ -1.5
USP47-208ENST00000529813 WNT10BO00744 389 aa5.68□□□□□ -1.5
USP47-208ENST00000529813 ECM2O94769 699 aaPredicted RBP5.68□□□□□ -1.5
USP47-208ENST00000529813 IFIT2P09913 472 aaKnown RBP5.68□□□□□ -1.5
USP47-208ENST00000529813 GRIK5Q16478 980 aa5.68□□□□□ -1.5
USP47-208ENST00000529813 CCDC158Q5M9N0 1113 aa5.68□□□□□ -1.5
USP47-208ENST00000529813 CRBNQ96SW2 442 aa5.68□□□□□ -1.5
USP47-208ENST00000529813 DBNDD2Q9BQY9 259 aa5.68□□□□□ -1.5
USP47-208ENST00000529813 COPRSQ9NQ92 184 aa5.68□□□□□ -1.5
USP47-208ENST00000529813 ARFGEF1Q9Y6D6 1849 aa5.68□□□□□ -1.5
USP47-208ENST00000529813 SMARCA5O60264 1052 aaPredicted RBP5.68□□□□□ -1.5
USP47-208ENST00000529813 ITGBL1O95965 494 aaPredicted RBP5.68□□□□□ -1.5
USP47-208ENST00000529813 LDHBP07195 334 aaKnown RBP5.68□□□□□ -1.5
USP47-208ENST00000529813 PRDX5P30044 214 aa5.68□□□□□ -1.5
USP47-208ENST00000529813 SLC4A8Q2Y0W8 1093 aa5.68□□□□□ -1.5
USP47-208ENST00000529813 CEP85Q6P2H3 762 aa5.68□□□□□ -1.5
USP47-208ENST00000529813 TDRD7Q8NHU6 1098 aaKnown RBP5.68□□□□□ -1.5
USP47-208ENST00000529813 PRMT6Q96LA8 375 aaPredicted RBP5.68□□□□□ -1.5
USP47-208ENST00000529813 DNAJC2Q99543 621 aaKnown RBP5.68□□□□□ -1.5
USP47-208ENST00000529813 CHMP4BQ9H444 224 aaKnown RBP5.68□□□□□ -1.5
USP47-208ENST00000529813 TSKSQ9UJT2 592 aa5.68□□□□□ -1.5
USP47-208ENST00000529813 MYO3BQ8WXR4 1341 aa5.67□□□□□ -1.5
USP47-208ENST00000529813 IDH1O75874 414 aaKnown RBP5.67□□□□□ -1.5
USP47-208ENST00000529813 CRKP46108 304 aa5.67□□□□□ -1.5
USP47-208ENST00000529813 ZNF157P51786 506 aaPredicted RBP5.67□□□□□ -1.5
USP47-208ENST00000529813 RRP1P56182 461 aaKnown RBP5.67□□□□□ -1.5
USP47-208ENST00000529813 PICALMQ13492 652 aa5.67□□□□□ -1.5
USP47-208ENST00000529813 TEKT1Q969V4 418 aa5.67□□□□□ -1.5
USP47-208ENST00000529813 CDCA5Q96FF9 252 aa5.67□□□□□ -1.5
USP47-208ENST00000529813 GBA2Q9HCG7 927 aaPredicted RBP5.67□□□□□ -1.5
USP47-208ENST00000529813 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP5.67□□□□□ -1.5
USP47-208ENST00000529813 BRCA1P38398 1863 aaKnown RBP5.67□□□□□ -1.5
USP47-208ENST00000529813 ANKRD36CQ5JPF3 1778 aa5.67□□□□□ -1.5
USP47-208ENST00000529813 B4GALNT3Q6L9W6 998 aa5.67□□□□□ -1.5
USP47-208ENST00000529813 FBXO33Q7Z6M2 555 aa5.67□□□□□ -1.5
USP47-208ENST00000529813 CLASRPQ8N2M8 674 aaKnown RBP5.67□□□□□ -1.5
USP47-208ENST00000529813 WDR66Q8TBY9 1149 aa5.67□□□□□ -1.5
USP47-208ENST00000529813 TBC1D22AQ8WUA7 517 aa5.67□□□□□ -1.5
USP47-208ENST00000529813 ANGEL1Q9UNK9 670 aaKnown RBP5.67□□□□□ -1.5
USP47-208ENST00000529813 SNED1Q8TER0 1413 aa5.67□□□□□ -1.5
USP47-208ENST00000529813 AOC2O75106 756 aa5.66□□□□□ -1.5
USP47-208ENST00000529813 CIAO1O76071 339 aa5.66□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms