RNA–Protein interactions for RNA: ENST00000529545.1

VPS11-203, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS11, Length 576 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-203ENST00000529545 COA1Q9GZY4 146 aa11.59□□□□□ -0.55
VPS11-203ENST00000529545 PHAXQ9H814 394 aaKnown RBP11.59□□□□□ -0.55
VPS11-203ENST00000529545 MBIPQ9NS73 344 aa11.59□□□□□ -0.55
VPS11-203ENST00000529545 BSDC1Q9NW68 430 aaPredicted RBP11.59□□□□□ -0.55
VPS11-203ENST00000529545 ANGEL1Q9UNK9 670 aaKnown RBP11.59□□□□□ -0.55
VPS11-203ENST00000529545 MANSC4A6NHS7 340 aaPredicted RBP11.58□□□□□ -0.56
VPS11-203ENST00000529545 SASH1O94885 1247 aa11.58□□□□□ -0.56
VPS11-203ENST00000529545 CCT4P50991 539 aaKnown RBP11.58□□□□□ -0.56
VPS11-203ENST00000529545 CTSWP56202 376 aa11.58□□□□□ -0.56
VPS11-203ENST00000529545 CALD1Q05682 793 aaKnown RBP11.58□□□□□ -0.56
VPS11-203ENST00000529545 SPRYD7Q5W111 196 aa11.58□□□□□ -0.56
VPS11-203ENST00000529545 SLC10A4Q96EP9 437 aa11.58□□□□□ -0.56
VPS11-203ENST00000529545 MXD3Q9BW11 206 aa11.58□□□□□ -0.56
VPS11-203ENST00000529545 TRIM17Q9Y577 477 aa11.58□□□□□ -0.56
VPS11-203ENST00000529545 ELL2O00472 640 aaPredicted RBP11.57□□□□□ -0.56
VPS11-203ENST00000529545 GNAI1P63096 354 aa11.57□□□□□ -0.56
VPS11-203ENST00000529545 NEXNQ0ZGT2 675 aa11.57□□□□□ -0.56
VPS11-203ENST00000529545 LDLRAD1Q5T700 205 aa11.57□□□□□ -0.56
VPS11-203ENST00000529545 TTLL5Q6EMB2 1281 aa11.57□□□□□ -0.56
VPS11-203ENST00000529545 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.57□□□□□ -0.56
VPS11-203ENST00000529545 PCDHB8Q9UN66 801 aa11.57□□□□□ -0.56
VPS11-203ENST00000529545 MINPP1Q9UNW1 487 aa11.57□□□□□ -0.56
VPS11-203ENST00000529545 LEMD3Q9Y2U8 911 aa11.57□□□□□ -0.56
VPS11-203ENST00000529545 SPEF2Q9C093 1822 aa11.56□□□□□ -0.56
VPS11-203ENST00000529545 PPP1R12BO60237 982 aaPredicted RBP11.56□□□□□ -0.56
VPS11-203ENST00000529545 IGHMBP2P38935 993 aaKnown RBP11.56□□□□□ -0.56
VPS11-203ENST00000529545 CCDC30Q5VVM6 783 aa11.56□□□□□ -0.56
VPS11-203ENST00000529545 OTUD7BQ6GQQ9 843 aa11.56□□□□□ -0.56
VPS11-203ENST00000529545 KIAA0825Q8IV33 1275 aa11.56□□□□□ -0.56
VPS11-203ENST00000529545 TTLL11Q8NHH1 800 aa11.56□□□□□ -0.56
VPS11-203ENST00000529545 ANKRD2Q9GZV1 360 aa11.56□□□□□ -0.56
VPS11-203ENST00000529545 R3HDMLQ9H3Y0 253 aa11.56□□□□□ -0.56
VPS11-203ENST00000529545 IFT57Q9NWB7 429 aa11.56□□□□□ -0.56
VPS11-203ENST00000529545 MAP3K2Q9Y2U5 619 aa11.56□□□□□ -0.56
VPS11-203ENST00000529545 MYBBP1AQ9BQG0 1328 aaKnown RBP11.56□□□□□ -0.56
VPS11-203ENST00000529545 MYH3P11055 1940 aa11.55□□□□□ -0.56
VPS11-203ENST00000529545 MYO1BO43795 1136 aa11.55□□□□□ -0.56
VPS11-203ENST00000529545 ZBTB48P10074 688 aaPredicted RBP11.55□□□□□ -0.56
VPS11-203ENST00000529545 KCNJ4P48050 445 aa11.55□□□□□ -0.56
VPS11-203ENST00000529545 DLGAP5Q15398 846 aa11.55□□□□□ -0.56
VPS11-203ENST00000529545 HABP4Q5JVS0 413 aaKnown RBP11.55□□□□□ -0.56
VPS11-203ENST00000529545 ERO1AQ96HE7 468 aa11.55□□□□□ -0.56
VPS11-203ENST00000529545 GREM2Q9H772 168 aa11.55□□□□□ -0.56
VPS11-203ENST00000529545 ADAMTS8Q9UP79 889 aa11.55□□□□□ -0.56
VPS11-203ENST00000529545 COL1A1P02452 1464 aaPredicted RBP11.55□□□□□ -0.56
VPS11-203ENST00000529545 ZNF804BA4D1E1 1349 aa11.55□□□□□ -0.56
VPS11-203ENST00000529545 WTIPA6NIX2 430 aaPredicted RBP11.54□□□□□ -0.56
VPS11-203ENST00000529545 UNCXA6NJT0 531 aa11.54□□□□□ -0.56
VPS11-203ENST00000529545 ZNF853P0CG23 659 aa11.54□□□□□ -0.56
VPS11-203ENST00000529545 GTF2IP78347 998 aa11.54□□□□□ -0.56
VPS11-203ENST00000529545 SUPT20HL1Q3ZLR7 823 aa11.54□□□□□ -0.56
VPS11-203ENST00000529545 KSR2Q6VAB6 950 aa11.54□□□□□ -0.56
VPS11-203ENST00000529545 OTOP1Q7RTM1 612 aa11.54□□□□□ -0.56
VPS11-203ENST00000529545 MPHOSPH8Q99549 860 aa11.54□□□□□ -0.56
VPS11-203ENST00000529545 DEFB129Q9H1M3 183 aa11.54□□□□□ -0.56
VPS11-203ENST00000529545 PPP2R3BQ9Y5P8 575 aa11.54□□□□□ -0.56
VPS11-203ENST00000529545 PI4KAP2A4QPH2 592 aa11.53□□□□□ -0.56
VPS11-203ENST00000529545 POTEFA5A3E0 1075 aa11.53□□□□□ -0.56
VPS11-203ENST00000529545 SEC24BO95487 1268 aa11.53□□□□□ -0.56
VPS11-203ENST00000529545 ARHGEF6Q15052 776 aa11.53□□□□□ -0.56
VPS11-203ENST00000529545 TXNRD3Q86VQ6 643 aa11.53□□□□□ -0.56
VPS11-203ENST00000529545 PI4KAP1Q8N8J0 262 aa11.53□□□□□ -0.56
VPS11-203ENST00000529545 WNK4Q96J92 1243 aa11.53□□□□□ -0.56
VPS11-203ENST00000529545 STK31Q9BXU1 1019 aa11.53□□□□□ -0.56
VPS11-203ENST00000529545 ZNF646O15015 1829 aaPredicted RBP11.52□□□□□ -0.57
VPS11-203ENST00000529545 IGKV5-2P06315 115 aa11.52□□□□□ -0.57
VPS11-203ENST00000529545 IREB2P48200 963 aaKnown RBP11.52□□□□□ -0.57
VPS11-203ENST00000529545 MAP3K11Q16584 847 aa11.52□□□□□ -0.57
VPS11-203ENST00000529545 UBE3BQ7Z3V4 1068 aa11.52□□□□□ -0.57
VPS11-203ENST00000529545 C8orf58Q8NAV2 365 aa11.52□□□□□ -0.57
VPS11-203ENST00000529545 ZBED3Q96IU2 234 aaPredicted RBP11.52□□□□□ -0.57
VPS11-203ENST00000529545 EFCC1Q9HA90 598 aa11.52□□□□□ -0.57
VPS11-203ENST00000529545 FZD1Q9UP38 647 aa11.52□□□□□ -0.57
VPS11-203ENST00000529545 PTPN22Q9Y2R2 807 aa11.52□□□□□ -0.57
VPS11-203ENST00000529545 POTEB2H3BUK9 544 aa11.51□□□□□ -0.57
VPS11-203ENST00000529545 ITGA6P23229 1130 aa11.51□□□□□ -0.57
VPS11-203ENST00000529545 SP3Q02447 781 aa11.51□□□□□ -0.57
VPS11-203ENST00000529545 CWF19L2Q2TBE0 894 aaKnown RBP11.51□□□□□ -0.57
VPS11-203ENST00000529545 MAMSTRQ6ZN01 415 aa11.51□□□□□ -0.57
VPS11-203ENST00000529545 MTMR14Q8NCE2 650 aa11.51□□□□□ -0.57
VPS11-203ENST00000529545 CD99L2Q8TCZ2 262 aa11.51□□□□□ -0.57
VPS11-203ENST00000529545 CLMNQ96JQ2 1002 aa11.51□□□□□ -0.57
VPS11-203ENST00000529545 CD209Q9NNX6 404 aa11.51□□□□□ -0.57
VPS11-203ENST00000529545 RBBP6Q7Z6E9 1792 aaKnown RBP11.5□□□□□ -0.57
VPS11-203ENST00000529545 NEURL1BA8MQ27 555 aa11.5□□□□□ -0.57
VPS11-203ENST00000529545 H7C1W4 665 aa11.5□□□□□ -0.57
VPS11-203ENST00000529545 IGF2BP3O00425 579 aaKnown RBP eCLIP11.5□□□□□ -0.57
VPS11-203ENST00000529545 APAF1O14727 1248 aa11.5□□□□□ -0.57
VPS11-203ENST00000529545 RBM5P52756 815 aaKnown RBP eCLIP11.5□□□□□ -0.57
VPS11-203ENST00000529545 CRHR2Q13324 411 aa11.5□□□□□ -0.57
VPS11-203ENST00000529545 PDAP1Q13442 181 aaKnown RBP11.5□□□□□ -0.57
VPS11-203ENST00000529545 NBPF11Q86T75 865 aa11.5□□□□□ -0.57
VPS11-203ENST00000529545 ANKRD13AQ8IZ07 590 aa11.5□□□□□ -0.57
VPS11-203ENST00000529545 ARMC5Q96C12 935 aa11.5□□□□□ -0.57
VPS11-203ENST00000529545 VEZTQ9HBM0 779 aa11.5□□□□□ -0.57
VPS11-203ENST00000529545 ECM29Q5VYK3 1845 aa11.5□□□□□ -0.57
VPS11-203ENST00000529545 CLRN2A0PK11 232 aa11.49□□□□□ -0.57
VPS11-203ENST00000529545 F8W031 263 aaPredicted RBP11.49□□□□□ -0.57
VPS11-203ENST00000529545 WDHD1O75717 1129 aaPredicted RBP11.49□□□□□ -0.57
VPS11-203ENST00000529545 EN2P19622 333 aaPredicted RBP11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms