RNA–Protein interactions for RNA: ENST00000529526.5

CTNND1-220, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 6,099 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-220ENST00000529526 FAM212AQ96EL1 285 aa9.23□□□□□ -0.93
CTNND1-220ENST00000529526 ZBTB40Q9NUA8 1239 aa9.23□□□□□ -0.93
CTNND1-220ENST00000529526 SLTMQ9NWH9 1034 aaKnown RBP eCLIP9.23□□□□□ -0.93
CTNND1-220ENST00000529526 SERPINA10Q9UK55 444 aa9.23□□□□□ -0.93
CTNND1-220ENST00000529526 PLCH2O75038 1416 aa9.23□□□□□ -0.93
CTNND1-220ENST00000529526 RNMTO43148 476 aaKnown RBP9.23□□□□□ -0.93
CTNND1-220ENST00000529526 CCDC172P0C7W6 258 aa9.23□□□□□ -0.93
CTNND1-220ENST00000529526 GNAQP50148 359 aa9.23□□□□□ -0.93
CTNND1-220ENST00000529526 RAB3GAP1Q15042 981 aa9.23□□□□□ -0.93
CTNND1-220ENST00000529526 SRRTQ9BXP5 876 aaKnown RBP9.23□□□□□ -0.93
CTNND1-220ENST00000529526 A0A1W2PRG0 241 aa9.23□□□□□ -0.93
CTNND1-220ENST00000529526 HOXC9P31274 260 aa9.23□□□□□ -0.93
CTNND1-220ENST00000529526 CALCOCO1Q9P1Z2 691 aa9.23□□□□□ -0.93
CTNND1-220ENST00000529526 NPATQ14207 1427 aa9.23□□□□□ -0.93
CTNND1-220ENST00000529526 ASXL2Q76L83 1435 aa9.23□□□□□ -0.93
CTNND1-220ENST00000529526 CA8P35219 290 aa9.22□□□□□ -0.93
CTNND1-220ENST00000529526 GRM1Q13255 1194 aa9.22□□□□□ -0.93
CTNND1-220ENST00000529526 MCM6Q14566 821 aa9.22□□□□□ -0.93
CTNND1-220ENST00000529526 NSFL1CQ9UNZ2 370 aaKnown RBP9.22□□□□□ -0.93
CTNND1-220ENST00000529526 OTUD7AQ8TE49 926 aaPredicted RBP9.22□□□□□ -0.93
CTNND1-220ENST00000529526 USP26Q9BXU7 913 aa9.22□□□□□ -0.93
CTNND1-220ENST00000529526 LZTFL1Q9NQ48 299 aa9.22□□□□□ -0.93
CTNND1-220ENST00000529526 IFNKQ9P0W0 207 aa9.22□□□□□ -0.93
CTNND1-220ENST00000529526 GNAT2P19087 354 aa9.22□□□□□ -0.93
CTNND1-220ENST00000529526 NYXQ9GZU5 481 aa9.22□□□□□ -0.93
CTNND1-220ENST00000529526 IKBKGQ9Y6K9 419 aa9.22□□□□□ -0.93
CTNND1-220ENST00000529526 BICRAQ9NZM4 1560 aa9.22□□□□□ -0.93
CTNND1-220ENST00000529526 EIF2AK4Q9P2K8 1649 aaKnown RBP9.22□□□□□ -0.93
CTNND1-220ENST00000529526 ACTN2P35609 894 aa9.22□□□□□ -0.93
CTNND1-220ENST00000529526 ZNF354CQ86Y25 554 aa9.22□□□□□ -0.93
CTNND1-220ENST00000529526 MPHOSPH6Q99547 160 aaKnown RBP9.22□□□□□ -0.93
CTNND1-220ENST00000529526 NUP160Q12769 1436 aa9.22□□□□□ -0.93
CTNND1-220ENST00000529526 WDR7Q9Y4E6 1490 aa9.22□□□□□ -0.93
CTNND1-220ENST00000529526 SPDYE3A6NKU9 549 aa9.22□□□□□ -0.93
CTNND1-220ENST00000529526 FAM13AO94988 1023 aa9.22□□□□□ -0.93
CTNND1-220ENST00000529526 MBD4O95243 580 aa9.22□□□□□ -0.93
CTNND1-220ENST00000529526 GIGYF2Q6Y7W6 1299 aaKnown RBP9.22□□□□□ -0.93
CTNND1-220ENST00000529526 DHX32Q7L7V1 743 aaKnown RBP9.22□□□□□ -0.93
CTNND1-220ENST00000529526 OGFOD1Q8N543 542 aa9.22□□□□□ -0.93
CTNND1-220ENST00000529526 KLHDC4Q8TBB5 520 aa9.22□□□□□ -0.93
CTNND1-220ENST00000529526 GUCA1BQ9UMX6 200 aa9.22□□□□□ -0.93
CTNND1-220ENST00000529526 CTAGE9A4FU28 777 aa9.21□□□□□ -0.93
CTNND1-220ENST00000529526 ZNF174Q15697 407 aa9.21□□□□□ -0.93
CTNND1-220ENST00000529526 PPP1R14CQ8TAE6 165 aa9.21□□□□□ -0.93
CTNND1-220ENST00000529526 SOS1Q07889 1333 aaPredicted RBP9.21□□□□□ -0.93
CTNND1-220ENST00000529526 TRAPPC8Q9Y2L5 1435 aa9.21□□□□□ -0.93
CTNND1-220ENST00000529526 DTNBO60941 627 aa9.21□□□□□ -0.93
CTNND1-220ENST00000529526 SP4Q02446 784 aa9.21□□□□□ -0.93
CTNND1-220ENST00000529526 CEP63Q96MT8 703 aa9.21□□□□□ -0.93
CTNND1-220ENST00000529526 SELENOOQ9BVL4 669 aa9.21□□□□□ -0.93
CTNND1-220ENST00000529526 PKD2L1Q9P0L9 805 aa9.21□□□□□ -0.93
CTNND1-220ENST00000529526 A0A1B0GVL5 298 aa9.21□□□□□ -0.94
CTNND1-220ENST00000529526 EEF2P13639 858 aaKnown RBP9.21□□□□□ -0.94
CTNND1-220ENST00000529526 KRT79Q5XKE5 535 aa9.21□□□□□ -0.94
CTNND1-220ENST00000529526 CCDC155Q8N6L0 562 aa9.21□□□□□ -0.94
CTNND1-220ENST00000529526 TACC1O75410 805 aa9.21□□□□□ -0.94
CTNND1-220ENST00000529526 LDHBP07195 334 aaKnown RBP9.21□□□□□ -0.94
CTNND1-220ENST00000529526 SPAG1Q07617 926 aa9.21□□□□□ -0.94
CTNND1-220ENST00000529526 GSTA5Q7RTV2 222 aa9.21□□□□□ -0.94
CTNND1-220ENST00000529526 SPECC1LQ69YQ0 1117 aa9.21□□□□□ -0.94
CTNND1-220ENST00000529526 CCDC50Q8IVM0 306 aa9.21□□□□□ -0.94
CTNND1-220ENST00000529526 FAM89AQ96GI7 184 aa9.21□□□□□ -0.94
CTNND1-220ENST00000529526 RTCBQ9Y3I0 505 aaKnown RBP9.21□□□□□ -0.94
CTNND1-220ENST00000529526 VWA3AA6NCI4 1184 aa9.2□□□□□ -0.94
CTNND1-220ENST00000529526 TPTE2Q6XPS3 522 aa9.2□□□□□ -0.94
CTNND1-220ENST00000529526 TSNARE1Q96NA8 513 aa9.2□□□□□ -0.94
CTNND1-220ENST00000529526 CTNND2Q9UQB3 1225 aa9.2□□□□□ -0.94
CTNND1-220ENST00000529526 DMRT2Q9Y5R5 561 aa9.2□□□□□ -0.94
CTNND1-220ENST00000529526 SMIM23A6NLE4 172 aa9.2□□□□□ -0.94
CTNND1-220ENST00000529526 B4E1Z4 1266 aa9.2□□□□□ -0.94
CTNND1-220ENST00000529526 ZNF569Q5MCW4 686 aa9.2□□□□□ -0.94
CTNND1-220ENST00000529526 SMC5Q8IY18 1101 aa9.2□□□□□ -0.94
CTNND1-220ENST00000529526 VTI1AQ96AJ9 217 aa9.2□□□□□ -0.94
CTNND1-220ENST00000529526 TCHPQ9BT92 498 aa9.2□□□□□ -0.94
CTNND1-220ENST00000529526 UBAP1LF5GYI3 381 aa9.2□□□□□ -0.94
CTNND1-220ENST00000529526 GCP02774 474 aa9.2□□□□□ -0.94
CTNND1-220ENST00000529526 TIMM10P62072 90 aa9.2□□□□□ -0.94
CTNND1-220ENST00000529526 SYT10Q6XYQ8 523 aa9.2□□□□□ -0.94
CTNND1-220ENST00000529526 BBXQ8WY36 941 aaPredicted RBP9.2□□□□□ -0.94
CTNND1-220ENST00000529526 ARMT1Q9H993 441 aa9.2□□□□□ -0.94
CTNND1-220ENST00000529526 ARFGAP3Q9NP61 516 aa9.2□□□□□ -0.94
CTNND1-220ENST00000529526 CALML3P27482 149 aa9.2□□□□□ -0.94
CTNND1-220ENST00000529526 NEK11Q8NG66 645 aa9.2□□□□□ -0.94
CTNND1-220ENST00000529526 ZNF594Q96JF6 807 aaPredicted RBP9.2□□□□□ -0.94
CTNND1-220ENST00000529526 DCAF5Q96JK2 942 aa9.2□□□□□ -0.94
CTNND1-220ENST00000529526 TESK2Q96S53 571 aa9.2□□□□□ -0.94
CTNND1-220ENST00000529526 FERMT1Q9BQL6 677 aa9.2□□□□□ -0.94
CTNND1-220ENST00000529526 TFCP2L1Q9NZI6 479 aa9.2□□□□□ -0.94
CTNND1-220ENST00000529526 RASAL2Q9UJF2 1139 aa9.2□□□□□ -0.94
CTNND1-220ENST00000529526 NUP153P49790 1475 aaKnown RBP9.2□□□□□ -0.94
CTNND1-220ENST00000529526 ZBTB7BO15156 539 aaPredicted RBP9.19□□□□□ -0.94
CTNND1-220ENST00000529526 RHOXF2BP0C7M4 288 aa9.19□□□□□ -0.94
CTNND1-220ENST00000529526 DTHD1Q6ZMT9 781 aa9.19□□□□□ -0.94
CTNND1-220ENST00000529526 KRT222Q8N1A0 295 aa9.19□□□□□ -0.94
CTNND1-220ENST00000529526 RHOXF2Q9BQY4 288 aa9.19□□□□□ -0.94
CTNND1-220ENST00000529526 ZC3H12CQ9C0D7 883 aaKnown RBP9.19□□□□□ -0.94
CTNND1-220ENST00000529526 CCT6AP40227 531 aaKnown RBP9.19□□□□□ -0.94
CTNND1-220ENST00000529526 EIF6P56537 245 aaKnown RBP9.19□□□□□ -0.94
CTNND1-220ENST00000529526 CCDC42Q96M95 316 aa9.19□□□□□ -0.94
CTNND1-220ENST00000529526 CLEC11AQ9Y240 323 aa9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms