RNA–Protein interactions for RNA: ENST00000528966.5

LTBP3-211, Transcript of latent transforming growth factor beta binding protein 3, humanhuman

TSL 4

Gene LTBP3, Length 553 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP3-211ENST00000528966 PTCH2Q9Y6C5 1203 aa22.94■■□□□ 1.26
LTBP3-211ENST00000528966 CLRN2A0PK11 232 aa22.93■■□□□ 1.26
LTBP3-211ENST00000528966 ZNF853P0CG23 659 aa22.93■■□□□ 1.26
LTBP3-211ENST00000528966 SUPT20HL1Q3ZLR7 823 aa22.93■■□□□ 1.26
LTBP3-211ENST00000528966 SLC9C1Q4G0N8 1177 aa22.93■■□□□ 1.26
LTBP3-211ENST00000528966 MAP3K2Q9Y2U5 619 aa22.93■■□□□ 1.26
LTBP3-211ENST00000528966 ZSWIM8A7E2V4 1837 aa22.92■■□□□ 1.26
LTBP3-211ENST00000528966 IREB2P48200 963 aaKnown RBP22.92■■□□□ 1.26
LTBP3-211ENST00000528966 MS4A4AQ96JQ5 239 aa22.92■■□□□ 1.26
LTBP3-211ENST00000528966 CD209Q9NNX6 404 aa22.92■■□□□ 1.26
LTBP3-211ENST00000528966 SPDYE2BA6NHP3 402 aa22.91■■□□□ 1.26
LTBP3-211ENST00000528966 DDX58O95786 925 aaKnown RBP22.91■■□□□ 1.26
LTBP3-211ENST00000528966 SPDYE6P0CI01 402 aa22.91■■□□□ 1.26
LTBP3-211ENST00000528966 SLC4A8Q2Y0W8 1093 aa22.91■■□□□ 1.26
LTBP3-211ENST00000528966 NBPF11Q86T75 865 aa22.91■■□□□ 1.26
LTBP3-211ENST00000528966 ANKRD13AQ8IZ07 590 aa22.91■■□□□ 1.26
LTBP3-211ENST00000528966 PRMT6Q96LA8 375 aaPredicted RBP22.91■■□□□ 1.26
LTBP3-211ENST00000528966 COL6A3P12111 3177 aa22.91■■□□□ 1.26
LTBP3-211ENST00000528966 IRS2Q9Y4H2 1338 aa22.9■■□□□ 1.26
LTBP3-211ENST00000528966 IGHMBP2P38935 993 aaKnown RBP22.9■■□□□ 1.26
LTBP3-211ENST00000528966 CFAP100Q494V2 611 aa22.9■■□□□ 1.26
LTBP3-211ENST00000528966 OPTNQ96CV9 577 aa22.9■■□□□ 1.26
LTBP3-211ENST00000528966 ANKRD2Q9GZV1 360 aa22.9■■□□□ 1.26
LTBP3-211ENST00000528966 VEZTQ9HBM0 779 aa22.9■■□□□ 1.26
LTBP3-211ENST00000528966 CUL9Q8IWT3 2517 aa22.9■■□□□ 1.26
LTBP3-211ENST00000528966 MYCP01106 439 aaPredicted RBP22.89■■□□□ 1.25
LTBP3-211ENST00000528966 ELP3Q9H9T3 547 aa22.89■■□□□ 1.25
LTBP3-211ENST00000528966 A0A1B0GUL6 1792 aa22.89■■□□□ 1.25
LTBP3-211ENST00000528966 F8W031 263 aaPredicted RBP22.88■■□□□ 1.25
LTBP3-211ENST00000528966 SNAP23O00161 211 aa22.88■■□□□ 1.25
LTBP3-211ENST00000528966 MYO1BO43795 1136 aa22.88■■□□□ 1.25
LTBP3-211ENST00000528966 RASA3Q14644 834 aa22.88■■□□□ 1.25
LTBP3-211ENST00000528966 CWF19L2Q2TBE0 894 aaKnown RBP22.88■■□□□ 1.25
LTBP3-211ENST00000528966 CHRDL2Q6WN34 429 aa22.88■■□□□ 1.25
LTBP3-211ENST00000528966 C8orf58Q8NAV2 365 aa22.88■■□□□ 1.25
LTBP3-211ENST00000528966 BRI3BPQ8WY22 251 aa22.88■■□□□ 1.25
LTBP3-211ENST00000528966 PI4KAP2A4QPH2 592 aa22.87■■□□□ 1.25
LTBP3-211ENST00000528966 ITGA6P23229 1130 aa22.87■■□□□ 1.25
LTBP3-211ENST00000528966 RALBP1Q15311 655 aa22.87■■□□□ 1.25
LTBP3-211ENST00000528966 KSR2Q6VAB6 950 aa22.87■■□□□ 1.25
LTBP3-211ENST00000528966 UBE3BQ7Z3V4 1068 aa22.87■■□□□ 1.25
LTBP3-211ENST00000528966 PI4KAP1Q8N8J0 262 aa22.87■■□□□ 1.25
LTBP3-211ENST00000528966 CNKSR2Q8WXI2 1034 aa22.87■■□□□ 1.25
LTBP3-211ENST00000528966 NEURL1BA8MQ27 555 aa22.86■■□□□ 1.25
LTBP3-211ENST00000528966 CHRNDQ07001 517 aa22.86■■□□□ 1.25
LTBP3-211ENST00000528966 TAF1CQ15572 869 aaPredicted RBP22.86■■□□□ 1.25
LTBP3-211ENST00000528966 SH3TC2Q8TF17 1288 aa22.86■■□□□ 1.25
LTBP3-211ENST00000528966 H7C1W4 665 aa22.85■■□□□ 1.25
LTBP3-211ENST00000528966 KCNJ4P48050 445 aa22.85■■□□□ 1.25
LTBP3-211ENST00000528966 ARHGEF6Q15052 776 aa22.85■■□□□ 1.25
LTBP3-211ENST00000528966 MPHOSPH8Q99549 860 aa22.85■■□□□ 1.25
LTBP3-211ENST00000528966 ZFYVE28Q9HCC9 887 aa22.85■■□□□ 1.25
LTBP3-211ENST00000528966 IFT57Q9NWB7 429 aa22.85■■□□□ 1.25
LTBP3-211ENST00000528966 RBM27Q9P2N5 1060 aaKnown RBP22.85■■□□□ 1.25
LTBP3-211ENST00000528966 ADAMTS8Q9UP79 889 aa22.85■■□□□ 1.25
LTBP3-211ENST00000528966 LAMA3Q16787 3333 aa22.85■■□□□ 1.25
LTBP3-211ENST00000528966 CCDC30Q5VVM6 783 aa22.84■■□□□ 1.25
LTBP3-211ENST00000528966 PPP1R3FQ6ZSY5 799 aaPredicted RBP22.84■■□□□ 1.25
LTBP3-211ENST00000528966 CDAN1Q8IWY9 1227 aa22.84■■□□□ 1.25
LTBP3-211ENST00000528966 FAM43AQ8N2R8 423 aa22.84■■□□□ 1.25
LTBP3-211ENST00000528966 ARHGAP39Q9C0H5 1083 aa22.84■■□□□ 1.25
LTBP3-211ENST00000528966 CCL15-CCL14A0A0B4J2E2 113 aa22.83■■□□□ 1.25
LTBP3-211ENST00000528966 IL1R1P14778 569 aa22.83■■□□□ 1.25
LTBP3-211ENST00000528966 CCL15Q16663 113 aa22.83■■□□□ 1.25
LTBP3-211ENST00000528966 C15orf52Q6ZUT6 534 aaKnown RBP22.83■■□□□ 1.25
LTBP3-211ENST00000528966 PLA2G12BQ9BX93 195 aa22.83■■□□□ 1.25
LTBP3-211ENST00000528966 FKBP1AP62942 108 aaKnown RBP22.82■■□□□ 1.24
LTBP3-211ENST00000528966 GNAI1P63096 354 aa22.82■■□□□ 1.24
LTBP3-211ENST00000528966 NEXNQ0ZGT2 675 aa22.82■■□□□ 1.24
LTBP3-211ENST00000528966 WDR43Q15061 677 aaKnown RBP eCLIP22.82■■□□□ 1.24
LTBP3-211ENST00000528966 SHISA4Q96DD7 197 aa22.82■■□□□ 1.24
LTBP3-211ENST00000528966 JAG2Q9Y219 1238 aa22.82■■□□□ 1.24
LTBP3-211ENST00000528966 DLL1O00548 723 aa22.81■■□□□ 1.24
LTBP3-211ENST00000528966 TAF5LO75529 589 aa22.81■■□□□ 1.24
LTBP3-211ENST00000528966 CSF1RP07333 972 aa22.81■■□□□ 1.24
LTBP3-211ENST00000528966 GTF2A2P52657 109 aa22.81■■□□□ 1.24
LTBP3-211ENST00000528966 VGLL4Q14135 290 aa22.81■■□□□ 1.24
LTBP3-211ENST00000528966 TSPYL6Q8N831 410 aa22.81■■□□□ 1.24
LTBP3-211ENST00000528966 HELBQ8NG08 1087 aaPredicted RBP22.81■■□□□ 1.24
LTBP3-211ENST00000528966 TEPSINQ96N21 525 aa22.81■■□□□ 1.24
LTBP3-211ENST00000528966 ARAP2Q8WZ64 1704 aa22.81■■□□□ 1.24
LTBP3-211ENST00000528966 RBM5P52756 815 aaKnown RBP eCLIP22.8■■□□□ 1.24
LTBP3-211ENST00000528966 CASP7P55210 303 aa22.8■■□□□ 1.24
LTBP3-211ENST00000528966 SPDYE2Q495Y8 402 aa22.8■■□□□ 1.24
LTBP3-211ENST00000528966 MYBBP1AQ9BQG0 1328 aaKnown RBP22.8■■□□□ 1.24
LTBP3-211ENST00000528966 LACTBP83111 547 aaPredicted RBP22.79■■□□□ 1.24
LTBP3-211ENST00000528966 PRO3102Q9H379 93 aa22.79■■□□□ 1.24
LTBP3-211ENST00000528966 ZNF70Q9UC06 446 aaPredicted RBP22.79■■□□□ 1.24
LTBP3-211ENST00000528966 TLR2O60603 784 aa22.78■■□□□ 1.24
LTBP3-211ENST00000528966 TNFAIP1Q13829 316 aa22.78■■□□□ 1.24
LTBP3-211ENST00000528966 GCKRQ14397 625 aa22.78■■□□□ 1.24
LTBP3-211ENST00000528966 MTFR1Q15390 333 aa22.78■■□□□ 1.24
LTBP3-211ENST00000528966 ZNF804AQ7Z570 1209 aa22.78■■□□□ 1.24
LTBP3-211ENST00000528966 DDX55Q8NHQ9 600 aaKnown RBP eCLIP22.78■■□□□ 1.24
LTBP3-211ENST00000528966 DPF3Q92784 378 aa22.78■■□□□ 1.24
LTBP3-211ENST00000528966 MAP3K9P80192 1104 aa22.77■■□□□ 1.24
LTBP3-211ENST00000528966 SLC17A8Q8NDX2 589 aa22.77■■□□□ 1.24
LTBP3-211ENST00000528966 TDRD3Q9H7E2 651 aaKnown RBP22.77■■□□□ 1.24
LTBP3-211ENST00000528966 G2E3Q7L622 706 aa22.76■■□□□ 1.23
LTBP3-211ENST00000528966 CHMP4AQ9BY43 222 aa22.76■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms