RNA–Protein interactions for RNA: ENST00000528461.5

SEC16B-208, Transcript of SEC16 homolog B, endoplasmic reticulum export factor, humanhuman

TSL 1 (best)

Gene SEC16B, Length 3,277 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC16B-208ENST00000528461 GOLGA6L3A6NEY3 463 aa16.07■□□□□ 0.16
SEC16B-208ENST00000528461 PDE6AP16499 860 aa16.07■□□□□ 0.16
SEC16B-208ENST00000528461 BCAMP50895 628 aa16.07■□□□□ 0.16
SEC16B-208ENST00000528461 TMEM87AQ8NBN3 555 aa16.07■□□□□ 0.16
SEC16B-208ENST00000528461 NKX2-3Q8TAU0 364 aa16.07■□□□□ 0.16
SEC16B-208ENST00000528461 BRPF3Q9ULD4 1205 aa16.07■□□□□ 0.16
SEC16B-208ENST00000528461 BRWD3Q6RI45 1802 aa16.07■□□□□ 0.16
SEC16B-208ENST00000528461 HMGB1P09429 215 aaKnown RBP16.06■□□□□ 0.16
SEC16B-208ENST00000528461 BICDL1Q6ZP65 573 aa16.06■□□□□ 0.16
SEC16B-208ENST00000528461 SEPT12Q8IYM1 358 aa16.06■□□□□ 0.16
SEC16B-208ENST00000528461 ZNF804BA4D1E1 1349 aa16.06■□□□□ 0.16
SEC16B-208ENST00000528461 ZNF532Q9HCE3 1301 aa16.06■□□□□ 0.16
SEC16B-208ENST00000528461 UBR3Q6ZT12 1888 aa16.06■□□□□ 0.16
SEC16B-208ENST00000528461 BRF1Q92994 677 aa16.06■□□□□ 0.16
SEC16B-208ENST00000528461 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.06■□□□□ 0.16
SEC16B-208ENST00000528461 BSDC1Q9NW68 430 aaPredicted RBP16.06■□□□□ 0.16
SEC16B-208ENST00000528461 COL1A1P02452 1464 aaPredicted RBP16.05■□□□□ 0.16
SEC16B-208ENST00000528461 SCRN1Q12765 414 aa16.05■□□□□ 0.16
SEC16B-208ENST00000528461 CELF1Q92879 486 aaKnown RBP16.05■□□□□ 0.16
SEC16B-208ENST00000528461 GDPD2Q9HCC8 539 aa16.05■□□□□ 0.16
SEC16B-208ENST00000528461 GADD45BO75293 160 aaPredicted RBP16.05■□□□□ 0.16
SEC16B-208ENST00000528461 STK3Q13188 491 aa16.05■□□□□ 0.16
SEC16B-208ENST00000528461 FOXD4L6Q3SYB3 417 aaPredicted RBP16.05■□□□□ 0.16
SEC16B-208ENST00000528461 FOXD4L3Q6VB84 417 aaPredicted RBP16.05■□□□□ 0.16
SEC16B-208ENST00000528461 TM4SF1P30408 202 aa16.04■□□□□ 0.16
SEC16B-208ENST00000528461 EVCP57679 992 aa16.04■□□□□ 0.16
SEC16B-208ENST00000528461 USP48Q86UV5 1035 aa16.04■□□□□ 0.16
SEC16B-208ENST00000528461 CDC5LQ99459 802 aaKnown RBP16.04■□□□□ 0.16
SEC16B-208ENST00000528461 TMEM63CQ9P1W3 806 aa16.04■□□□□ 0.16
SEC16B-208ENST00000528461 RBM27Q9P2N5 1060 aaKnown RBP16.04■□□□□ 0.16
SEC16B-208ENST00000528461 TRPC5Q9UL62 973 aaPredicted RBP16.04■□□□□ 0.16
SEC16B-208ENST00000528461 MINPP1Q9UNW1 487 aa16.04■□□□□ 0.16
SEC16B-208ENST00000528461 PFKFB2O60825 505 aa16.04■□□□□ 0.16
SEC16B-208ENST00000528461 IDH1O75874 414 aaKnown RBP16.04■□□□□ 0.16
SEC16B-208ENST00000528461 CTDNEP1O95476 244 aa16.04■□□□□ 0.16
SEC16B-208ENST00000528461 ZNF445P59923 1031 aa16.04■□□□□ 0.16
SEC16B-208ENST00000528461 MEX3CQ5U5Q3 659 aaKnown RBP16.04■□□□□ 0.16
SEC16B-208ENST00000528461 ZSCAN25Q6NSZ9 544 aa16.04■□□□□ 0.16
SEC16B-208ENST00000528461 CAVIN1Q6NZI2 390 aaKnown RBP16.04■□□□□ 0.16
SEC16B-208ENST00000528461 RTCBQ9Y3I0 505 aaKnown RBP16.04■□□□□ 0.16
SEC16B-208ENST00000528461 JAK2O60674 1132 aa16.04■□□□□ 0.16
SEC16B-208ENST00000528461 L1TD1Q5T7N2 865 aaKnown RBP16.04■□□□□ 0.16
SEC16B-208ENST00000528461 MB21D2Q8IYB1 491 aaPredicted RBP16.04■□□□□ 0.16
SEC16B-208ENST00000528461 SMARCC2Q8TAQ2 1214 aa16.04■□□□□ 0.16
SEC16B-208ENST00000528461 STRBPQ96SI9 672 aaKnown RBP16.04■□□□□ 0.16
SEC16B-208ENST00000528461 CNPY2Q9Y2B0 182 aa16.04■□□□□ 0.16
SEC16B-208ENST00000528461 HAND2P61296 217 aa16.03■□□□□ 0.16
SEC16B-208ENST00000528461 ZSCAN23Q3MJ62 389 aa16.03■□□□□ 0.16
SEC16B-208ENST00000528461 CHST3Q7LGC8 479 aa16.03■□□□□ 0.16
SEC16B-208ENST00000528461 PANK2Q9BZ23 570 aa16.03■□□□□ 0.16
SEC16B-208ENST00000528461 CTNNA3Q9UI47 895 aa16.03■□□□□ 0.16
SEC16B-208ENST00000528461 ISY1Q9ULR0 285 aaKnown RBP16.03■□□□□ 0.16
SEC16B-208ENST00000528461 ANTXR2P58335 489 aa16.03■□□□□ 0.16
SEC16B-208ENST00000528461 APOBRQ0VD83 1088 aa16.03■□□□□ 0.16
SEC16B-208ENST00000528461 CDC37L1Q7L3B6 337 aa16.03■□□□□ 0.16
SEC16B-208ENST00000528461 BCL11BQ9C0K0 894 aaPredicted RBP16.03■□□□□ 0.16
SEC16B-208ENST00000528461 GPHNQ9NQX3 736 aaPredicted RBP16.03■□□□□ 0.16
SEC16B-208ENST00000528461 DENND2AQ9ULE3 1009 aa16.03■□□□□ 0.16
SEC16B-208ENST00000528461 CACNA1SQ13698 1873 aa16.03■□□□□ 0.16
SEC16B-208ENST00000528461 ANKRD18AQ8IVF6 992 aa16.02■□□□□ 0.16
SEC16B-208ENST00000528461 SETDB2Q96T68 719 aa16.02■□□□□ 0.16
SEC16B-208ENST00000528461 GRPEL1Q9HAV7 217 aa16.02■□□□□ 0.16
SEC16B-208ENST00000528461 LARP1BQ659C4 914 aaKnown RBP16.02■□□□□ 0.15
SEC16B-208ENST00000528461 SALL1Q9NSC2 1324 aa16.02■□□□□ 0.15
SEC16B-208ENST00000528461 ZPR1O75312 459 aa16.01■□□□□ 0.15
SEC16B-208ENST00000528461 IMMTQ16891 758 aaKnown RBP16.01■□□□□ 0.15
SEC16B-208ENST00000528461 NYXQ9GZU5 481 aa16.01■□□□□ 0.15
SEC16B-208ENST00000528461 EPB41L4AQ9HCS5 686 aaPredicted RBP16.01■□□□□ 0.15
SEC16B-208ENST00000528461 TACC3Q9Y6A5 838 aa16.01■□□□□ 0.15
SEC16B-208ENST00000528461 PDIA3P30101 505 aaKnown RBP16.01■□□□□ 0.15
SEC16B-208ENST00000528461 MRE11P49959 708 aa16.01■□□□□ 0.15
SEC16B-208ENST00000528461 CCDC24Q8N4L8 307 aa16.01■□□□□ 0.15
SEC16B-208ENST00000528461 UBE4AQ14139 1066 aa16■□□□□ 0.15
SEC16B-208ENST00000528461 FAM196AQ6ZSG2 479 aa16■□□□□ 0.15
SEC16B-208ENST00000528461 TBC1D10CQ8IV04 446 aa16■□□□□ 0.15
SEC16B-208ENST00000528461 MAGEB6Q8N7X4 407 aa16■□□□□ 0.15
SEC16B-208ENST00000528461 NSUN7Q8NE18 718 aaKnown RBP16■□□□□ 0.15
SEC16B-208ENST00000528461 CHD4Q14839 1912 aa16■□□□□ 0.15
SEC16B-208ENST00000528461 GYG1P46976 350 aa16■□□□□ 0.15
SEC16B-208ENST00000528461 ALX1Q15699 326 aa16■□□□□ 0.15
SEC16B-208ENST00000528461 ZNF274Q96GC6 653 aaPredicted RBP16■□□□□ 0.15
SEC16B-208ENST00000528461 IRS2Q9Y4H2 1338 aa16■□□□□ 0.15
SEC16B-208ENST00000528461 TIAM2Q8IVF5 1701 aa16■□□□□ 0.15
SEC16B-208ENST00000528461 DNM1Q05193 864 aaKnown RBP16■□□□□ 0.15
SEC16B-208ENST00000528461 NBPF5PQ86XG9 351 aaPredicted RBP16■□□□□ 0.15
SEC16B-208ENST00000528461 QTRT2Q9H974 415 aaKnown RBP16■□□□□ 0.15
SEC16B-208ENST00000528461 FAM84BQ96KN1 310 aaPredicted RBP15.99■□□□□ 0.15
SEC16B-208ENST00000528461 ZMYM6O95789 1325 aa15.99■□□□□ 0.15
SEC16B-208ENST00000528461 NCLP19338 710 aaKnown RBP15.99■□□□□ 0.15
SEC16B-208ENST00000528461 KLRK1P26718 216 aa15.99■□□□□ 0.15
SEC16B-208ENST00000528461 ADGRA1Q86SQ6 560 aa15.99■□□□□ 0.15
SEC16B-208ENST00000528461 SLC51AQ86UW1 340 aa15.99■□□□□ 0.15
SEC16B-208ENST00000528461 LLPHQ9BRT6 129 aaKnown RBP15.99■□□□□ 0.15
SEC16B-208ENST00000528461 ZNF213O14771 459 aa15.99■□□□□ 0.15
SEC16B-208ENST00000528461 MBD3O95983 291 aa15.99■□□□□ 0.15
SEC16B-208ENST00000528461 PDIA4P13667 645 aaKnown RBP15.99■□□□□ 0.15
SEC16B-208ENST00000528461 RPS8P62241 208 aaKnown RBP15.99■□□□□ 0.15
SEC16B-208ENST00000528461 ZNF384Q8TF68 577 aa15.99■□□□□ 0.15
SEC16B-208ENST00000528461 MYH15Q9Y2K3 1946 aa15.98■□□□□ 0.15
SEC16B-208ENST00000528461 VPS37CA5D8V6 355 aaPredicted RBP15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms