RNA–Protein interactions for RNA: ENST00000528439.5

RPS3-210, Transcript of ribosomal protein S3, humanhuman

TSL 3

Gene RPS3, Length 473 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3-210ENST00000528439 REC8O95072 547 aa12.13□□□□□ -0.47
RPS3-210ENST00000528439 HIBADHP31937 336 aaKnown RBP12.13□□□□□ -0.47
RPS3-210ENST00000528439 CAVIN4Q5BKX8 364 aa12.13□□□□□ -0.47
RPS3-210ENST00000528439 ZMYM1Q5SVZ6 1142 aa12.13□□□□□ -0.47
RPS3-210ENST00000528439 CCDC129Q6ZRS4 1044 aa12.13□□□□□ -0.47
RPS3-210ENST00000528439 ANO2Q9NQ90 1003 aa12.13□□□□□ -0.47
RPS3-210ENST00000528439 WWC3Q9ULE0 1092 aa12.13□□□□□ -0.47
RPS3-210ENST00000528439 ZNF646O15015 1829 aaPredicted RBP12.13□□□□□ -0.47
RPS3-210ENST00000528439 CHD4Q14839 1912 aa12.12□□□□□ -0.47
RPS3-210ENST00000528439 TCRBV5S4A2TA0A5A2 114 aa12.12□□□□□ -0.47
RPS3-210ENST00000528439 ZBTB22O15209 634 aa12.12□□□□□ -0.47
RPS3-210ENST00000528439 RNF113AO15541 343 aaKnown RBP12.12□□□□□ -0.47
RPS3-210ENST00000528439 ADD2P35612 726 aa12.12□□□□□ -0.47
RPS3-210ENST00000528439 PTH1RQ03431 593 aa12.12□□□□□ -0.47
RPS3-210ENST00000528439 VPS37DQ86XT2 251 aa12.12□□□□□ -0.47
RPS3-210ENST00000528439 CNKSR1Q969H4 720 aa12.12□□□□□ -0.47
RPS3-210ENST00000528439 OSBP2Q969R2 916 aa12.12□□□□□ -0.47
RPS3-210ENST00000528439 GNL3LQ9NVN8 582 aaKnown RBP12.12□□□□□ -0.47
RPS3-210ENST00000528439 ZNF219Q9P2Y4 722 aaPredicted RBP12.12□□□□□ -0.47
RPS3-210ENST00000528439 JAG2Q9Y219 1238 aa12.12□□□□□ -0.47
RPS3-210ENST00000528439 PDS5AQ29RF7 1337 aaKnown RBP12.11□□□□□ -0.47
RPS3-210ENST00000528439 CCDC171Q6TFL3 1326 aa12.11□□□□□ -0.47
RPS3-210ENST00000528439 C6orf229H3BNL8 230 aa12.11□□□□□ -0.47
RPS3-210ENST00000528439 SEMA3EO15041 775 aa12.11□□□□□ -0.47
RPS3-210ENST00000528439 IDH1O75874 414 aaKnown RBP12.11□□□□□ -0.47
RPS3-210ENST00000528439 PDE6AP16499 860 aa12.11□□□□□ -0.47
RPS3-210ENST00000528439 TTF1Q15361 905 aaPredicted RBP12.11□□□□□ -0.47
RPS3-210ENST00000528439 DPP8Q6V1X1 898 aaPredicted RBP12.11□□□□□ -0.47
RPS3-210ENST00000528439 KLHL34Q8N239 644 aa12.11□□□□□ -0.47
RPS3-210ENST00000528439 MPNDQ8N594 471 aa12.11□□□□□ -0.47
RPS3-210ENST00000528439 TDRD7Q8NHU6 1098 aaKnown RBP12.11□□□□□ -0.47
RPS3-210ENST00000528439 RUFY2Q8WXA3 655 aa12.11□□□□□ -0.47
RPS3-210ENST00000528439 PALD1Q9ULE6 856 aa12.11□□□□□ -0.47
RPS3-210ENST00000528439 FOXP2O15409 715 aa12.1□□□□□ -0.47
RPS3-210ENST00000528439 CHAF1AQ13111 956 aaPredicted RBP12.1□□□□□ -0.47
RPS3-210ENST00000528439 ZNF804AQ7Z570 1209 aa12.1□□□□□ -0.47
RPS3-210ENST00000528439 TICAM2Q86XR7 235 aa12.1□□□□□ -0.47
RPS3-210ENST00000528439 ZNF384Q8TF68 577 aa12.1□□□□□ -0.47
RPS3-210ENST00000528439 APPBP2Q92624 585 aa12.1□□□□□ -0.47
RPS3-210ENST00000528439 CD209Q9NNX6 404 aa12.1□□□□□ -0.47
RPS3-210ENST00000528439 DENND2AQ9ULE3 1009 aa12.1□□□□□ -0.47
RPS3-210ENST00000528439 CD2APQ9Y5K6 639 aa12.1□□□□□ -0.47
RPS3-210ENST00000528439 ZNF532Q9HCE3 1301 aa12.1□□□□□ -0.47
RPS3-210ENST00000528439 COL4A5P29400 1685 aa12.1□□□□□ -0.47
RPS3-210ENST00000528439 C21orf2O43822 256 aa12.09□□□□□ -0.47
RPS3-210ENST00000528439 ZFYP08048 801 aaPredicted RBP12.09□□□□□ -0.47
RPS3-210ENST00000528439 IL1R1P14778 569 aa12.09□□□□□ -0.47
RPS3-210ENST00000528439 ANP32AP39687 249 aaKnown RBP12.09□□□□□ -0.47
RPS3-210ENST00000528439 GRIK5Q16478 980 aa12.09□□□□□ -0.47
RPS3-210ENST00000528439 MCMDC2Q4G0Z9 681 aa12.09□□□□□ -0.47
RPS3-210ENST00000528439 SLC9C2Q5TAH2 1124 aa12.09□□□□□ -0.47
RPS3-210ENST00000528439 VPS53Q5VIR6 699 aa12.09□□□□□ -0.47
RPS3-210ENST00000528439 MAGEB6Q8N7X4 407 aa12.09□□□□□ -0.47
RPS3-210ENST00000528439 TTLL6Q8N841 843 aa12.09□□□□□ -0.47
RPS3-210ENST00000528439 RTFDC1Q9BY42 306 aaPredicted RBP12.09□□□□□ -0.47
RPS3-210ENST00000528439 FHDC1Q9C0D6 1143 aaPredicted RBP12.09□□□□□ -0.47
RPS3-210ENST00000528439 PUS7LQ9H0K6 701 aaKnown RBP12.09□□□□□ -0.47
RPS3-210ENST00000528439 HELLSQ9NRZ9 838 aa12.09□□□□□ -0.47
RPS3-210ENST00000528439 SCN9AQ15858 1988 aa12.09□□□□□ -0.47
RPS3-210ENST00000528439 RIMBP2O15034 1052 aa12.08□□□□□ -0.48
RPS3-210ENST00000528439 EIF5BO60841 1220 aaKnown RBP12.08□□□□□ -0.48
RPS3-210ENST00000528439 PRDX5P30044 214 aa12.08□□□□□ -0.48
RPS3-210ENST00000528439 HSPA4P34932 840 aa12.08□□□□□ -0.48
RPS3-210ENST00000528439 TGFB2P61812 414 aa12.08□□□□□ -0.48
RPS3-210ENST00000528439 UBE3CQ15386 1083 aa12.08□□□□□ -0.48
RPS3-210ENST00000528439 WASHC4Q2M389 1173 aa12.08□□□□□ -0.48
RPS3-210ENST00000528439 ADGRA1Q86SQ6 560 aa12.08□□□□□ -0.48
RPS3-210ENST00000528439 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.08□□□□□ -0.482e-11■□□□□ 9.4
RPS3-210ENST00000528439 ABCF2Q9UG63 623 aa12.08□□□□□ -0.48
RPS3-210ENST00000528439 SALL1Q9NSC2 1324 aa12.08□□□□□ -0.48
RPS3-210ENST00000528439 EPB41L2O43491 1005 aaKnown RBP12.07□□□□□ -0.48
RPS3-210ENST00000528439 FRAT2O75474 233 aaPredicted RBP12.07□□□□□ -0.48
RPS3-210ENST00000528439 MAP3K12Q12852 859 aa12.07□□□□□ -0.48
RPS3-210ENST00000528439 NLGN2Q8NFZ4 835 aa12.07□□□□□ -0.48
RPS3-210ENST00000528439 MAP4K1Q92918 833 aa12.07□□□□□ -0.48
RPS3-210ENST00000528439 IL17RAQ96F46 866 aa12.07□□□□□ -0.48
RPS3-210ENST00000528439 LRP2BPQ9P2M1 347 aa12.07□□□□□ -0.48
RPS3-210ENST00000528439 RBM8AQ9Y5S9 174 aaKnown RBP12.07□□□□□ -0.48
RPS3-210ENST00000528439 TAF6LQ9Y6J9 622 aa12.07□□□□□ -0.48
RPS3-210ENST00000528439 ADAMTSL1Q8N6G6 1762 aa12.07□□□□□ -0.48
RPS3-210ENST00000528439 FER1L6Q2WGJ9 1857 aa12.06□□□□□ -0.48
RPS3-210ENST00000528439 GPAA1O43292 621 aa12.06□□□□□ -0.48
RPS3-210ENST00000528439 DOK7Q18PE1 504 aa12.06□□□□□ -0.48
RPS3-210ENST00000528439 LRRFIP1Q32MZ4 808 aaKnown RBP12.06□□□□□ -0.48
RPS3-210ENST00000528439 CCDC93Q567U6 631 aa12.06□□□□□ -0.48
RPS3-210ENST00000528439 ZSCAN25Q6NSZ9 544 aa12.06□□□□□ -0.48
RPS3-210ENST00000528439 KIAA1211Q6ZU35 1233 aa12.06□□□□□ -0.48
RPS3-210ENST00000528439 RASEFQ8IZ41 740 aa12.06□□□□□ -0.48
RPS3-210ENST00000528439 SYT17Q9BSW7 474 aa12.06□□□□□ -0.48
RPS3-210ENST00000528439 COA1Q9GZY4 146 aa12.06□□□□□ -0.48
RPS3-210ENST00000528439 RAI14Q9P0K7 980 aa12.06□□□□□ -0.48
RPS3-210ENST00000528439 FAM205AQ6ZU69 1335 aa12.06□□□□□ -0.48
RPS3-210ENST00000528439 CCDC88AQ3V6T2 1871 aa12.06□□□□□ -0.48
RPS3-210ENST00000528439 PSME4Q14997 1843 aa12.05□□□□□ -0.48
RPS3-210ENST00000528439 LAMA4Q16363 1823 aa12.05□□□□□ -0.48
RPS3-210ENST00000528439 MBD4O95243 580 aa12.05□□□□□ -0.48
RPS3-210ENST00000528439 CD2BP2O95400 341 aaKnown RBP12.05□□□□□ -0.48
RPS3-210ENST00000528439 MECOMQ03112 1051 aa12.05□□□□□ -0.48
RPS3-210ENST00000528439 COL9A3Q14050 684 aaPredicted RBP12.05□□□□□ -0.48
RPS3-210ENST00000528439 NECTIN1Q15223 517 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms