RNA–Protein interactions for RNA: ENST00000528429.5

SOX6-211, Transcript of SRY-box 6, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SOX6, Length 2,656 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6-211ENST00000528429 COL4A1P02462 1669 aa9.2□□□□□ -0.94
SOX6-211ENST00000528429 M0R2C6 588 aa9.19□□□□□ -0.94
SOX6-211ENST00000528429 SERPINB2P05120 415 aa9.19□□□□□ -0.94
SOX6-211ENST00000528429 GYG1P46976 350 aa9.19□□□□□ -0.94
SOX6-211ENST00000528429 SLC9C2Q5TAH2 1124 aa9.19□□□□□ -0.94
SOX6-211ENST00000528429 VPS37DQ86XT2 251 aa9.19□□□□□ -0.94
SOX6-211ENST00000528429 OSBP2Q969R2 916 aa9.19□□□□□ -0.94
SOX6-211ENST00000528429 ZNF622Q969S3 477 aaKnown RBP eCLIP9.19□□□□□ -0.944e-6■■■■■ 36.2
SOX6-211ENST00000528429 TMX3Q96JJ7 454 aa9.19□□□□□ -0.94
SOX6-211ENST00000528429 DDX24Q9GZR7 859 aaKnown RBP eCLIP9.19□□□□□ -0.94
SOX6-211ENST00000528429 PIH1D3Q9NQM4 214 aaKnown RBP9.19□□□□□ -0.94
SOX6-211ENST00000528429 HELLSQ9NRZ9 838 aa9.19□□□□□ -0.94
SOX6-211ENST00000528429 HMG20BQ9P0W2 317 aa9.19□□□□□ -0.94
SOX6-211ENST00000528429 LRP5O75197 1615 aa9.19□□□□□ -0.94
SOX6-211ENST00000528429 ARID4AP29374 1257 aaPredicted RBP9.19□□□□□ -0.94
SOX6-211ENST00000528429 MMP14P50281 582 aa9.19□□□□□ -0.94
SOX6-211ENST00000528429 FOXD4L5Q5VV16 416 aaPredicted RBP9.19□□□□□ -0.94
SOX6-211ENST00000528429 SLC51AQ86UW1 340 aa9.19□□□□□ -0.94
SOX6-211ENST00000528429 ZGPATQ8N5A5 531 aaKnown RBP9.19□□□□□ -0.94
SOX6-211ENST00000528429 SPATA5Q8NB90 893 aa9.19□□□□□ -0.94
SOX6-211ENST00000528429 FOXD4L4Q8WXT5 416 aaPredicted RBP9.19□□□□□ -0.94
SOX6-211ENST00000528429 TCEANC2Q96MN5 208 aa9.19□□□□□ -0.94
SOX6-211ENST00000528429 PLSCR1O15162 318 aa9.18□□□□□ -0.94
SOX6-211ENST00000528429 ST5P78524 1137 aa9.18□□□□□ -0.94
SOX6-211ENST00000528429 RPGRQ92834 1020 aaKnown RBP9.18□□□□□ -0.94
SOX6-211ENST00000528429 CYP46A1Q9Y6A2 500 aa9.18□□□□□ -0.94
SOX6-211ENST00000528429 C4AP0C0L4 1744 aa9.18□□□□□ -0.94
SOX6-211ENST00000528429 ZFYP08048 801 aaPredicted RBP9.18□□□□□ -0.94
SOX6-211ENST00000528429 MCM2P49736 904 aa9.18□□□□□ -0.94
SOX6-211ENST00000528429 AK2P54819 239 aa9.18□□□□□ -0.94
SOX6-211ENST00000528429 DDR1Q08345 913 aa9.18□□□□□ -0.94
SOX6-211ENST00000528429 COL9A3Q14050 684 aaPredicted RBP9.18□□□□□ -0.94
SOX6-211ENST00000528429 TTF1Q15361 905 aaPredicted RBP9.18□□□□□ -0.94
SOX6-211ENST00000528429 PUS7LQ9H0K6 701 aaKnown RBP9.18□□□□□ -0.94
SOX6-211ENST00000528429 U3KPZ7 1027 aaPredicted RBP9.18□□□□□ -0.94
SOX6-211ENST00000528429 TAF1P21675 1872 aa9.18□□□□□ -0.94
SOX6-211ENST00000528429 SPEF2Q9C093 1822 aa9.18□□□□□ -0.94
SOX6-211ENST00000528429 SETQ01105 290 aaPredicted RBP9.18□□□□□ -0.94
SOX6-211ENST00000528429 MSL1Q68DK7 614 aa9.18□□□□□ -0.94
SOX6-211ENST00000528429 COL23A1Q86Y22 540 aaPredicted RBP9.18□□□□□ -0.94
SOX6-211ENST00000528429 APPBP2Q92624 585 aa9.18□□□□□ -0.94
SOX6-211ENST00000528429 ZNF512BQ96KM6 892 aaPredicted RBP9.18□□□□□ -0.94
SOX6-211ENST00000528429 ANKIB1Q9P2G1 1089 aa9.18□□□□□ -0.94
SOX6-211ENST00000528429 ABCF2Q9UG63 623 aa9.18□□□□□ -0.94
SOX6-211ENST00000528429 WWC3Q9ULE0 1092 aa9.18□□□□□ -0.94
SOX6-211ENST00000528429 HSPD1P10809 573 aaKnown RBP9.17□□□□□ -0.94
SOX6-211ENST00000528429 KLRK1P26718 216 aa9.17□□□□□ -0.94
SOX6-211ENST00000528429 TM4SF1P30408 202 aa9.17□□□□□ -0.94
SOX6-211ENST00000528429 UBE4AQ14139 1066 aa9.17□□□□□ -0.94
SOX6-211ENST00000528429 CAVIN4Q5BKX8 364 aa9.17□□□□□ -0.94
SOX6-211ENST00000528429 MPNDQ8N594 471 aa9.17□□□□□ -0.94
SOX6-211ENST00000528429 PDRG1Q9NUG6 133 aa9.17□□□□□ -0.94
SOX6-211ENST00000528429 ZNF532Q9HCE3 1301 aa9.17□□□□□ -0.94
SOX6-211ENST00000528429 CYP21A2P08686 494 aa9.17□□□□□ -0.94
SOX6-211ENST00000528429 PDE6AP16499 860 aa9.17□□□□□ -0.94
SOX6-211ENST00000528429 PSMA5P28066 241 aa9.17□□□□□ -0.94
SOX6-211ENST00000528429 TTLL5Q6EMB2 1281 aa9.17□□□□□ -0.94
SOX6-211ENST00000528429 ZSCAN25Q6NSZ9 544 aa9.17□□□□□ -0.94
SOX6-211ENST00000528429 BLOC1S2Q6QNY1 142 aa9.17□□□□□ -0.94
SOX6-211ENST00000528429 IL17RAQ96F46 866 aa9.17□□□□□ -0.94
SOX6-211ENST00000528429 GNL3LQ9NVN8 582 aaKnown RBP9.17□□□□□ -0.94
SOX6-211ENST00000528429 LRP2BPQ9P2M1 347 aa9.17□□□□□ -0.94
SOX6-211ENST00000528429 LAMB2P55268 1798 aa9.17□□□□□ -0.94
SOX6-211ENST00000528429 A0A0G2JLW4 131 aa9.16□□□□□ -0.94
SOX6-211ENST00000528429 GPAA1O43292 621 aa9.16□□□□□ -0.94
SOX6-211ENST00000528429 ADD2P35612 726 aa9.16□□□□□ -0.94
SOX6-211ENST00000528429 EN1Q05925 392 aaPredicted RBP9.16□□□□□ -0.94
SOX6-211ENST00000528429 MAP3K12Q12852 859 aa9.16□□□□□ -0.94
SOX6-211ENST00000528429 RUFY3Q7L099 469 aa9.16□□□□□ -0.94
SOX6-211ENST00000528429 MAGEB6Q8N7X4 407 aa9.16□□□□□ -0.94
SOX6-211ENST00000528429 FBXO41Q8TF61 875 aa9.16□□□□□ -0.94
SOX6-211ENST00000528429 TTC14Q96N46 770 aa9.16□□□□□ -0.94
SOX6-211ENST00000528429 ZSWIM6Q9HCJ5 1215 aa9.16□□□□□ -0.94
SOX6-211ENST00000528429 UBR3Q6ZT12 1888 aa9.16□□□□□ -0.94
SOX6-211ENST00000528429 POLRMTO00411 1230 aaKnown RBP9.16□□□□□ -0.94
SOX6-211ENST00000528429 DTNBO60941 627 aa9.16□□□□□ -0.94
SOX6-211ENST00000528429 DDIT3P35638 169 aa9.16□□□□□ -0.94
SOX6-211ENST00000528429 HAND2P61296 217 aa9.16□□□□□ -0.94
SOX6-211ENST00000528429 GRAPQ13588 217 aa9.16□□□□□ -0.94
SOX6-211ENST00000528429 GRAPLQ8TC17 118 aaPredicted RBP9.16□□□□□ -0.94
SOX6-211ENST00000528429 KCNB2Q92953 911 aa9.16□□□□□ -0.94
SOX6-211ENST00000528429 AKT1S1Q96B36 256 aa9.16□□□□□ -0.94
SOX6-211ENST00000528429 DSCC1Q9BVC3 393 aa9.16□□□□□ -0.94
SOX6-211ENST00000528429 JAG2Q9Y219 1238 aa9.16□□□□□ -0.94
SOX6-211ENST00000528429 COL24A1Q17RW2 1714 aa9.15□□□□□ -0.94
SOX6-211ENST00000528429 HMGB2P26583 209 aaKnown RBP9.15□□□□□ -0.94
SOX6-211ENST00000528429 CHAF1AQ13111 956 aaPredicted RBP9.15□□□□□ -0.94
SOX6-211ENST00000528429 FAM84BQ96KN1 310 aaPredicted RBP9.15□□□□□ -0.94
SOX6-211ENST00000528429 TM6SF1Q9BZW5 370 aa9.15□□□□□ -0.94
SOX6-211ENST00000528429 ANKRD2Q9GZV1 360 aa9.15□□□□□ -0.94
SOX6-211ENST00000528429 CIZ1Q9ULV3 898 aaPredicted RBP9.15□□□□□ -0.94
SOX6-211ENST00000528429 LIMCH1Q9UPQ0 1083 aa9.15□□□□□ -0.94
SOX6-211ENST00000528429 GOLGB1Q14789 3259 aaKnown RBP9.15□□□□□ -0.94
SOX6-211ENST00000528429 MMP10P09238 476 aa9.15□□□□□ -0.95
SOX6-211ENST00000528429 PSEN1P49768 467 aa9.15□□□□□ -0.95
SOX6-211ENST00000528429 PKP1Q13835 747 aa9.15□□□□□ -0.95
SOX6-211ENST00000528429 KRT32Q14532 448 aa9.15□□□□□ -0.95
SOX6-211ENST00000528429 GSE1Q14687 1217 aa9.15□□□□□ -0.95
SOX6-211ENST00000528429 EZH2Q15910 746 aaKnown RBP9.15□□□□□ -0.95
SOX6-211ENST00000528429 NLGN1Q8N2Q7 840 aa9.15□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms