RNA–Protein interactions for RNA: ENST00000528302.5

SF3B2-206, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 5 BASIC

Gene SF3B2, Length 3,254 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-206ENST00000528302 PDIA3P30101 505 aaKnown RBP11.47□□□□□ -0.57
SF3B2-206ENST00000528302 SYNE3Q6ZMZ3 975 aa11.47□□□□□ -0.57
SF3B2-206ENST00000528302 KCTD17Q8N5Z5 321 aa11.47□□□□□ -0.57
SF3B2-206ENST00000528302 ZNF396Q96N95 335 aaPredicted RBP11.47□□□□□ -0.57
SF3B2-206ENST00000528302 INCENPQ9NQS7 918 aa11.47□□□□□ -0.57
SF3B2-206ENST00000528302 SLU7O95391 586 aaKnown RBP11.46□□□□□ -0.57
SF3B2-206ENST00000528302 HSPD1P10809 573 aaKnown RBP11.46□□□□□ -0.57
SF3B2-206ENST00000528302 ARMCX5Q6P1M9 558 aa11.46□□□□□ -0.57
SF3B2-206ENST00000528302 KRT222Q8N1A0 295 aa11.46□□□□□ -0.57
SF3B2-206ENST00000528302 CHMP4CQ96CF2 233 aa11.46□□□□□ -0.57
SF3B2-206ENST00000528302 CLIC6Q96NY7 704 aa11.46□□□□□ -0.57
SF3B2-206ENST00000528302 FEZ1Q99689 392 aa11.46□□□□□ -0.57
SF3B2-206ENST00000528302 UTP14AQ9BVJ6 771 aaKnown RBP11.46□□□□□ -0.57
SF3B2-206ENST00000528302 HDAC5Q9UQL6 1122 aa11.46□□□□□ -0.57
SF3B2-206ENST00000528302 NWD1Q149M9 1564 aa11.46□□□□□ -0.58
SF3B2-206ENST00000528302 M0R2C6 588 aa11.46□□□□□ -0.58
SF3B2-206ENST00000528302 ATP5JP18859 108 aa11.46□□□□□ -0.58
SF3B2-206ENST00000528302 E4F1Q66K89 784 aaPredicted RBP11.46□□□□□ -0.58
SF3B2-206ENST00000528302 ARHGAP30Q7Z6I6 1101 aaPredicted RBP11.46□□□□□ -0.58
SF3B2-206ENST00000528302 NBPF11Q86T75 865 aa11.46□□□□□ -0.58
SF3B2-206ENST00000528302 DPF2Q92785 391 aa11.46□□□□□ -0.58
SF3B2-206ENST00000528302 PHKBQ93100 1093 aa11.46□□□□□ -0.58
SF3B2-206ENST00000528302 CCDC34Q96HJ3 373 aa11.46□□□□□ -0.58
SF3B2-206ENST00000528302 RCOR1Q9UKL0 485 aa11.46□□□□□ -0.58
SF3B2-206ENST00000528302 FAM208AQ9UK61 1670 aaKnown RBP11.45□□□□□ -0.58
SF3B2-206ENST00000528302 RBM6P78332 1123 aaKnown RBP11.45□□□□□ -0.58
SF3B2-206ENST00000528302 ZNF397Q8NF99 534 aaPredicted RBP11.45□□□□□ -0.58
SF3B2-206ENST00000528302 PFKFB2O60825 505 aa11.45□□□□□ -0.58
SF3B2-206ENST00000528302 FDPSP14324 419 aaKnown RBP11.45□□□□□ -0.58
SF3B2-206ENST00000528302 TTLL7Q6ZT98 887 aa11.45□□□□□ -0.58
SF3B2-206ENST00000528302 PPP1R13BQ96KQ4 1090 aa11.45□□□□□ -0.58
SF3B2-206ENST00000528302 METTL22Q9BUU2 404 aaPredicted RBP11.45□□□□□ -0.58
SF3B2-206ENST00000528302 NAT10Q9H0A0 1025 aaKnown RBP11.45□□□□□ -0.58
SF3B2-206ENST00000528302 ZCCHC17Q9NP64 241 aaKnown RBP11.45□□□□□ -0.58
SF3B2-206ENST00000528302 BABAM1Q9NWV8 329 aa11.45□□□□□ -0.58
SF3B2-206ENST00000528302 MTMR7Q9Y216 660 aa11.45□□□□□ -0.58
SF3B2-206ENST00000528302 TMEM232C9JQI7 657 aa11.45□□□□□ -0.58
SF3B2-206ENST00000528302 HOXB7P09629 217 aa11.45□□□□□ -0.58
SF3B2-206ENST00000528302 ADORA1P30542 326 aa11.45□□□□□ -0.58
SF3B2-206ENST00000528302 GYS2P54840 703 aa11.45□□□□□ -0.58
SF3B2-206ENST00000528302 PNOCQ13519 176 aa11.45□□□□□ -0.58
SF3B2-206ENST00000528302 ZNF827Q17R98 1081 aa11.45□□□□□ -0.58
SF3B2-206ENST00000528302 RBM43Q6ZSC3 357 aaKnown RBP11.45□□□□□ -0.58
SF3B2-206ENST00000528302 MICU3Q86XE3 530 aa11.45□□□□□ -0.58
SF3B2-206ENST00000528302 KBTBD3Q8NAB2 608 aa11.45□□□□□ -0.58
SF3B2-206ENST00000528302 TOMM22Q9NS69 142 aa11.45□□□□□ -0.58
SF3B2-206ENST00000528302 KIF28PB7ZC32 967 aa11.44□□□□□ -0.58
SF3B2-206ENST00000528302 ZNF202O95125 648 aa11.44□□□□□ -0.58
SF3B2-206ENST00000528302 KIF20AO95235 890 aa11.44□□□□□ -0.58
SF3B2-206ENST00000528302 A1BGP04217 495 aa11.44□□□□□ -0.58
SF3B2-206ENST00000528302 SLFN14P0C7P3 912 aa11.44□□□□□ -0.58
SF3B2-206ENST00000528302 MNS1Q8NEH6 495 aa11.44□□□□□ -0.58
SF3B2-206ENST00000528302 OSBP2Q969R2 916 aa11.44□□□□□ -0.58
SF3B2-206ENST00000528302 MRFAP1L1Q96HT8 127 aa11.44□□□□□ -0.58
SF3B2-206ENST00000528302 ZNF446Q9NWS9 450 aa11.44□□□□□ -0.58
SF3B2-206ENST00000528302 TUBGCP6Q96RT7 1819 aa11.44□□□□□ -0.58
SF3B2-206ENST00000528302 SPTLC2O15270 562 aa11.44□□□□□ -0.58
SF3B2-206ENST00000528302 COBLO75128 1261 aa11.44□□□□□ -0.58
SF3B2-206ENST00000528302 AMOTQ4VCS5 1084 aa11.44□□□□□ -0.58
SF3B2-206ENST00000528302 SECISBP2LQ93073 1101 aaKnown RBP11.44□□□□□ -0.58
SF3B2-206ENST00000528302 KIAA1468Q9P260 1216 aa11.44□□□□□ -0.58
SF3B2-206ENST00000528302 SKIDA1Q1XH10 827 aa11.43□□□□□ -0.58
SF3B2-206ENST00000528302 TEX2Q8IWB9 1127 aa11.43□□□□□ -0.58
SF3B2-206ENST00000528302 CMTR1Q8N1G2 835 aaKnown RBP11.43□□□□□ -0.58
SF3B2-206ENST00000528302 CPLX3Q8WVH0 158 aa11.43□□□□□ -0.58
SF3B2-206ENST00000528302 HAUS7Q99871 368 aa11.43□□□□□ -0.58
SF3B2-206ENST00000528302 CARD6Q9BX69 1037 aa11.43□□□□□ -0.58
SF3B2-206ENST00000528302 MAST3O60307 1309 aa11.43□□□□□ -0.58
SF3B2-206ENST00000528302 PRC1O43663 620 aa11.43□□□□□ -0.58
SF3B2-206ENST00000528302 TATP17735 454 aaPredicted RBP11.43□□□□□ -0.58
SF3B2-206ENST00000528302 NYAP1Q6ZVC0 841 aa11.43□□□□□ -0.58
SF3B2-206ENST00000528302 TRMT44Q8IYL2 757 aaKnown RBP11.43□□□□□ -0.58
SF3B2-206ENST00000528302 ENGASEQ8NFI3 743 aa11.43□□□□□ -0.58
SF3B2-206ENST00000528302 NKX2-3Q8TAU0 364 aa11.43□□□□□ -0.58
SF3B2-206ENST00000528302 BBXQ8WY36 941 aaPredicted RBP11.43□□□□□ -0.58
SF3B2-206ENST00000528302 CARMIL3Q8ND23 1372 aa11.43□□□□□ -0.58
SF3B2-206ENST00000528302 PXDNLA1KZ92 1463 aa11.43□□□□□ -0.58
SF3B2-206ENST00000528302 A0A1B0GUL7 405 aa11.43□□□□□ -0.58
SF3B2-206ENST00000528302 FOXN1O15353 648 aa11.43□□□□□ -0.58
SF3B2-206ENST00000528302 UBASH3AP57075 661 aa11.43□□□□□ -0.58
SF3B2-206ENST00000528302 KARSQ15046 597 aaKnown RBP11.43□□□□□ -0.58
SF3B2-206ENST00000528302 TERF2Q15554 542 aa11.43□□□□□ -0.58
SF3B2-206ENST00000528302 TEX35Q5T0J7 233 aa11.43□□□□□ -0.58
SF3B2-206ENST00000528302 RALYLQ86SE5 291 aaKnown RBP11.43□□□□□ -0.58
SF3B2-206ENST00000528302 FMR1NBQ8N0W7 255 aaPredicted RBP11.43□□□□□ -0.58
SF3B2-206ENST00000528302 DESI2Q9BSY9 194 aa11.43□□□□□ -0.58
SF3B2-206ENST00000528302 GOLGB1Q14789 3259 aaKnown RBP11.42□□□□□ -0.58
SF3B2-206ENST00000528302 PFKFB1P16118 471 aa11.42□□□□□ -0.58
SF3B2-206ENST00000528302 RFX5P48382 616 aaPredicted RBP11.42□□□□□ -0.58
SF3B2-206ENST00000528302 CLCN6P51797 869 aa11.42□□□□□ -0.58
SF3B2-206ENST00000528302 FANCCQ00597 558 aa11.42□□□□□ -0.58
SF3B2-206ENST00000528302 SCARF1Q14162 830 aa11.42□□□□□ -0.58
SF3B2-206ENST00000528302 SYNE4Q8N205 404 aa11.42□□□□□ -0.58
SF3B2-206ENST00000528302 NEK11Q8NG66 645 aa11.42□□□□□ -0.58
SF3B2-206ENST00000528302 SMARCC2Q8TAQ2 1214 aa11.42□□□□□ -0.58
SF3B2-206ENST00000528302 UBXN4Q92575 508 aa11.42□□□□□ -0.58
SF3B2-206ENST00000528302 SENP2Q9HC62 589 aa11.42□□□□□ -0.58
SF3B2-206ENST00000528302 ERBB3P21860 1342 aa11.42□□□□□ -0.58
SF3B2-206ENST00000528302 ANKARQ7Z5J8 1434 aa11.42□□□□□ -0.58
SF3B2-206ENST00000528302 CTAGE5O15320 804 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms