RNA–Protein interactions for RNA: ENST00000527821.2

SSH3-205, Transcript of slingshot protein phosphatase 3, humanhuman

TSL 3

Gene SSH3, Length 656 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH3-205ENST00000527821 ARAP2Q8WZ64 1704 aa20.41■□□□□ 0.86
SSH3-205ENST00000527821 USP17L8P0C7I0 530 aa20.41■□□□□ 0.86
SSH3-205ENST00000527821 CHAF1AQ13111 956 aaPredicted RBP20.41■□□□□ 0.86
SSH3-205ENST00000527821 TBC1D10BQ4KMP7 808 aaPredicted RBP20.41■□□□□ 0.86
SSH3-205ENST00000527821 RBM26Q5T8P6 1007 aaKnown RBP20.41■□□□□ 0.86
SSH3-205ENST00000527821 SAMD7Q7Z3H4 446 aa20.41■□□□□ 0.86
SSH3-205ENST00000527821 TRPM4Q8TD43 1214 aa20.41■□□□□ 0.86
SSH3-205ENST00000527821 FAM205AQ6ZU69 1335 aa20.41■□□□□ 0.86
SSH3-205ENST00000527821 ADORA1P30542 326 aa20.4■□□□□ 0.86
SSH3-205ENST00000527821 HSP90AB4PQ58FF6 505 aa20.4■□□□□ 0.86
SSH3-205ENST00000527821 KIAA0825Q8IV33 1275 aa20.4■□□□□ 0.86
SSH3-205ENST00000527821 OGFOD1Q8N543 542 aa20.4■□□□□ 0.86
SSH3-205ENST00000527821 ADAMTSL1Q8N6G6 1762 aa20.4■□□□□ 0.86
SSH3-205ENST00000527821 GNL3LQ9NVN8 582 aaKnown RBP20.4■□□□□ 0.86
SSH3-205ENST00000527821 MYH13Q9UKX3 1938 aa20.39■□□□□ 0.86
SSH3-205ENST00000527821 FKBP1AP62942 108 aaKnown RBP20.39■□□□□ 0.85
SSH3-205ENST00000527821 GORABQ5T7V8 394 aa20.39■□□□□ 0.85
SSH3-205ENST00000527821 ERC1Q8IUD2 1116 aa20.39■□□□□ 0.85
SSH3-205ENST00000527821 XAGE2Q96GT9 111 aa20.39■□□□□ 0.85
SSH3-205ENST00000527821 PHKA1P46020 1223 aa20.38■□□□□ 0.85
SSH3-205ENST00000527821 HIRAP54198 1017 aaPredicted RBP20.38■□□□□ 0.85
SSH3-205ENST00000527821 ZNF280AP59817 542 aaPredicted RBP20.38■□□□□ 0.85
SSH3-205ENST00000527821 KIF4BQ2VIQ3 1234 aa20.38■□□□□ 0.85
SSH3-205ENST00000527821 MFSD14BQ5SR56 506 aa20.38■□□□□ 0.85
SSH3-205ENST00000527821 CCDC102BQ68D86 513 aa20.38■□□□□ 0.85
SSH3-205ENST00000527821 CERS5Q8N5B7 392 aa20.38■□□□□ 0.85
SSH3-205ENST00000527821 GPR108Q9NPR9 543 aa20.38■□□□□ 0.85
SSH3-205ENST00000527821 HDAC9Q9UKV0 1011 aa20.38■□□□□ 0.85
SSH3-205ENST00000527821 F8W031 263 aaPredicted RBP20.37■□□□□ 0.85
SSH3-205ENST00000527821 EGFRP00533 1210 aa20.37■□□□□ 0.85
SSH3-205ENST00000527821 TNNI3KQ59H18 835 aa20.37■□□□□ 0.85
SSH3-205ENST00000527821 MAP1SQ66K74 1059 aaPredicted RBP20.37■□□□□ 0.85
SSH3-205ENST00000527821 MYOZ2Q9NPC6 264 aa20.37■□□□□ 0.85
SSH3-205ENST00000527821 FPGT-TNNI3KV9GXZ4 949 aa20.37■□□□□ 0.85
SSH3-205ENST00000527821 APBB1O00213 710 aa20.36■□□□□ 0.85
SSH3-205ENST00000527821 TBC1D22AQ8WUA7 517 aa20.36■□□□□ 0.85
SSH3-205ENST00000527821 MMP14P50281 582 aa20.35■□□□□ 0.85
SSH3-205ENST00000527821 CNTROBQ8N137 903 aa20.35■□□□□ 0.85
SSH3-205ENST00000527821 RHPN1Q8TCX5 695 aa20.35■□□□□ 0.85
SSH3-205ENST00000527821 ZC3H15Q8WU90 426 aaKnown RBP20.35■□□□□ 0.85
SSH3-205ENST00000527821 DENND2AQ9ULE3 1009 aa20.35■□□□□ 0.85
SSH3-205ENST00000527821 SEMA3EO15041 775 aa20.34■□□□□ 0.85
SSH3-205ENST00000527821 RAB11FIP3O75154 756 aa20.34■□□□□ 0.85
SSH3-205ENST00000527821 KIF1BPQ96EK5 621 aa20.34■□□□□ 0.85
SSH3-205ENST00000527821 PCDHB15Q9Y5E8 787 aa20.34■□□□□ 0.85
SSH3-205ENST00000527821 WDR66Q8TBY9 1149 aa20.33■□□□□ 0.85
SSH3-205ENST00000527821 DBNDD2Q9BQY9 259 aa20.33■□□□□ 0.85
SSH3-205ENST00000527821 IL1RAPL2Q9NP60 686 aa20.33■□□□□ 0.85
SSH3-205ENST00000527821 COL1A1P02452 1464 aaPredicted RBP20.32■□□□□ 0.84
SSH3-205ENST00000527821 HSPA6P17066 643 aa20.32■□□□□ 0.84
SSH3-205ENST00000527821 SCARF1Q14162 830 aa20.32■□□□□ 0.84
SSH3-205ENST00000527821 CCDC158Q5M9N0 1113 aa20.32■□□□□ 0.84
SSH3-205ENST00000527821 EAF2Q96CJ1 260 aaPredicted RBP20.32■□□□□ 0.84
SSH3-205ENST00000527821 CCDC8Q9H0W5 538 aaPredicted RBP20.32■□□□□ 0.84
SSH3-205ENST00000527821 BCL11AQ9H165 835 aa20.32■□□□□ 0.84
SSH3-205ENST00000527821 PGAP2Q9UHJ9 254 aa20.32■□□□□ 0.84
SSH3-205ENST00000527821 TTF2Q9UNY4 1162 aaKnown RBP20.32■□□□□ 0.84
SSH3-205ENST00000527821 ITGBL1O95965 494 aaPredicted RBP20.31■□□□□ 0.84
SSH3-205ENST00000527821 RASGRF1Q13972 1273 aa20.31■□□□□ 0.84
SSH3-205ENST00000527821 DLGAP5Q15398 846 aa20.31■□□□□ 0.84
SSH3-205ENST00000527821 TTC39AQ5SRH9 613 aa20.31■□□□□ 0.84
SSH3-205ENST00000527821 AACSQ86V21 672 aa20.31■□□□□ 0.84
SSH3-205ENST00000527821 CLASRPQ8N2M8 674 aaKnown RBP20.31■□□□□ 0.84
SSH3-205ENST00000527821 EXOC6Q8TAG9 804 aa20.31■□□□□ 0.84
SSH3-205ENST00000527821 DCPSQ96C86 337 aaKnown RBP20.31■□□□□ 0.84
SSH3-205ENST00000527821 GGA3Q9NZ52 723 aa20.31■□□□□ 0.84
SSH3-205ENST00000527821 WNT10BO00744 389 aa20.3■□□□□ 0.84
SSH3-205ENST00000527821 UQCRFS1P1P0C7P4 283 aa20.3■□□□□ 0.84
SSH3-205ENST00000527821 RBM5P52756 815 aaKnown RBP eCLIP20.3■□□□□ 0.84
SSH3-205ENST00000527821 AAMPQ13685 434 aa20.3■□□□□ 0.84
SSH3-205ENST00000527821 GRIK5Q16478 980 aa20.3■□□□□ 0.84
SSH3-205ENST00000527821 NBPF9Q3BBW0 867 aa20.3■□□□□ 0.84
SSH3-205ENST00000527821 ASTN2O75129 1339 aaPredicted RBP20.29■□□□□ 0.84
SSH3-205ENST00000527821 ZBTB22O15209 634 aa20.29■□□□□ 0.84
SSH3-205ENST00000527821 ARID4AP29374 1257 aaPredicted RBP20.29■□□□□ 0.84
SSH3-205ENST00000527821 CFAP100Q494V2 611 aa20.29■□□□□ 0.84
SSH3-205ENST00000527821 ANGEL2Q5VTE6 544 aaKnown RBP20.29■□□□□ 0.84
SSH3-205ENST00000527821 CDC37L1Q7L3B6 337 aa20.29■□□□□ 0.84
SSH3-205ENST00000527821 GLIS2Q9BZE0 524 aaPredicted RBP20.29■□□□□ 0.84
SSH3-205ENST00000527821 TLR7Q9NYK1 1049 aaKnown RBP20.29■□□□□ 0.84
SSH3-205ENST00000527821 DBNLQ9UJU6 430 aaKnown RBP20.29■□□□□ 0.84
SSH3-205ENST00000527821 SUGT1Q9Y2Z0 365 aa20.29■□□□□ 0.84
SSH3-205ENST00000527821 MAST3O60307 1309 aa20.28■□□□□ 0.84
SSH3-205ENST00000527821 IRX6P78412 446 aaPredicted RBP20.28■□□□□ 0.84
SSH3-205ENST00000527821 ZGPATQ8N5A5 531 aaKnown RBP20.28■□□□□ 0.84
SSH3-205ENST00000527821 SPATA5Q8NB90 893 aa20.28■□□□□ 0.84
SSH3-205ENST00000527821 LRRCC1Q9C099 1032 aa20.28■□□□□ 0.84
SSH3-205ENST00000527821 DCTPP1Q9H773 170 aa20.28■□□□□ 0.84
SSH3-205ENST00000527821 POLR2AP24928 1970 aaKnown RBP20.28■□□□□ 0.84
SSH3-205ENST00000527821 PDS5AQ29RF7 1337 aaKnown RBP20.27■□□□□ 0.84
SSH3-205ENST00000527821 PASKQ96RG2 1323 aa20.27■□□□□ 0.84
SSH3-205ENST00000527821 SALL1Q9NSC2 1324 aa20.27■□□□□ 0.84
SSH3-205ENST00000527821 TRAF5O00463 557 aa20.27■□□□□ 0.84
SSH3-205ENST00000527821 LDHBP07195 334 aaKnown RBP20.27■□□□□ 0.84
SSH3-205ENST00000527821 IFIT2P09913 472 aaKnown RBP20.27■□□□□ 0.84
SSH3-205ENST00000527821 APLP1P51693 650 aa20.27■□□□□ 0.84
SSH3-205ENST00000527821 KRT26Q7Z3Y9 468 aa20.27■□□□□ 0.84
SSH3-205ENST00000527821 USP48Q86UV5 1035 aa20.27■□□□□ 0.84
SSH3-205ENST00000527821 SULF1Q8IWU6 871 aa20.27■□□□□ 0.84
SSH3-205ENST00000527821 MTMR14Q8NCE2 650 aa20.27■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms