RNA–Protein interactions for RNA: ENST00000527584.5

PUF60-210, Transcript of poly(U) binding splicing factor 60, human

TSL 2

Gene PUF60, Length 547 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PUF60-210	ENST00000527584	SLAIN1	Q8ND83	568 aa		11.26	□□□□□ -0.61
PUF60-210	ENST00000527584	ASB2	Q96Q27	587 aa		11.26	□□□□□ -0.61
PUF60-210	ENST00000527584	UHRF1	Q96T88	793 aa	Predicted RBP	11.26	□□□□□ -0.61
PUF60-210	ENST00000527584	ZBTB3	Q9H5J0	574 aa		11.26	□□□□□ -0.61
PUF60-210	ENST00000527584	OTOF	Q9HC10	1997 aa		11.26	□□□□□ -0.61
PUF60-210	ENST00000527584	MYPN	Q86TC9	1320 aa		11.26	□□□□□ -0.61
PUF60-210	ENST00000527584	SASH1	O94885	1247 aa		11.25	□□□□□ -0.61
PUF60-210	ENST00000527584	MRE11	P49959	708 aa		11.25	□□□□□ -0.61
PUF60-210	ENST00000527584	MMP14	P50281	582 aa		11.25	□□□□□ -0.61
PUF60-210	ENST00000527584	GTF2A2	P52657	109 aa		11.25	□□□□□ -0.61
PUF60-210	ENST00000527584	BIN2	Q9UBW5	565 aa	Predicted RBP	11.25	□□□□□ -0.61
PUF60-210	ENST00000527584	ADGRA2	Q96PE1	1338 aa		11.25	□□□□□ -0.61
PUF60-210	ENST00000527584	IREB2	P48200	963 aa	Known RBP	11.24	□□□□□ -0.61
PUF60-210	ENST00000527584	PODN	Q7Z5L7	613 aa		11.24	□□□□□ -0.61
PUF60-210	ENST00000527584	OGFOD1	Q8N543	542 aa		11.24	□□□□□ -0.61
PUF60-210	ENST00000527584	PPP2R3B	Q9Y5P8	575 aa		11.24	□□□□□ -0.61
PUF60-210	ENST00000527584	MDM2	Q00987	491 aa	Predicted RBP	11.23	□□□□□ -0.61
PUF60-210	ENST00000527584	PRKCZ	Q05513	592 aa		11.23	□□□□□ -0.61
PUF60-210	ENST00000527584	DACT2	Q5SW24	774 aa		11.23	□□□□□ -0.61
PUF60-210	ENST00000527584	GAS2L2	Q8NHY3	880 aa		11.23	□□□□□ -0.61
PUF60-210	ENST00000527584	ELP3	Q9H9T3	547 aa		11.23	□□□□□ -0.61
PUF60-210	ENST00000527584		G3V3G9	751 aa		11.22	□□□□□ -0.61
PUF60-210	ENST00000527584	MGAM	O43451	1857 aa		11.22	□□□□□ -0.61
PUF60-210	ENST00000527584	WDHD1	O75717	1129 aa	Predicted RBP	11.22	□□□□□ -0.61
PUF60-210	ENST00000527584	SUPT20HL1	Q3ZLR7	823 aa		11.22	□□□□□ -0.61
PUF60-210	ENST00000527584	NBPF12	Q5TAG4	269 aa	Predicted RBP	11.22	□□□□□ -0.61
PUF60-210	ENST00000527584	DCAF8	Q5TAQ9	597 aa		11.22	□□□□□ -0.61
PUF60-210	ENST00000527584	PXYLP1	Q8TE99	480 aa		11.22	□□□□□ -0.61
PUF60-210	ENST00000527584	MXD3	Q9BW11	206 aa		11.22	□□□□□ -0.61
PUF60-210	ENST00000527584	NBPF3	Q9H094	633 aa		11.22	□□□□□ -0.61
PUF60-210	ENST00000527584	XIRP2	A4UGR9	3374 aa		11.22	□□□□□ -0.61
PUF60-210	ENST00000527584	BTBD19	C9JJ37	291 aa		11.21	□□□□□ -0.61
PUF60-210	ENST00000527584	FMNL1	O95466	1100 aa	Predicted RBP	11.21	□□□□□ -0.61
PUF60-210	ENST00000527584	INHA	P05111	366 aa		11.21	□□□□□ -0.61
PUF60-210	ENST00000527584	SF3B3	Q15393	1217 aa	Known RBP	11.21	□□□□□ -0.61
PUF60-210	ENST00000527584	PPP1R3F	Q6ZSY5	799 aa	Predicted RBP	11.21	□□□□□ -0.61
PUF60-210	ENST00000527584	GABRQ	Q9UN88	632 aa		11.21	□□□□□ -0.61
PUF60-210	ENST00000527584	DDX60L	Q5H9U9	1706 aa	Known RBP	11.21	□□□□□ -0.62
PUF60-210	ENST00000527584	ZNF804B	A4D1E1	1349 aa		11.2	□□□□□ -0.62
PUF60-210	ENST00000527584	MYO3B	Q8WXR4	1341 aa		11.2	□□□□□ -0.62
PUF60-210	ENST00000527584	ADCY3	O60266	1144 aa		11.2	□□□□□ -0.62
PUF60-210	ENST00000527584	SMAD3	P84022	425 aa	Known RBP	11.2	□□□□□ -0.62
PUF60-210	ENST00000527584	NLRP10	Q86W26	655 aa		11.2	□□□□□ -0.62
PUF60-210	ENST00000527584	EPHX3	Q9H6B9	360 aa		11.2	□□□□□ -0.62
PUF60-210	ENST00000527584	C11orf49	Q9H6J7	331 aa		11.2	□□□□□ -0.62
PUF60-210	ENST00000527584	CPA4	Q9UI42	421 aa		11.2	□□□□□ -0.62
PUF60-210	ENST00000527584	ECM29	Q5VYK3	1845 aa		11.19	□□□□□ -0.62
PUF60-210	ENST00000527584	PFAS	O15067	1338 aa		11.19	□□□□□ -0.62
PUF60-210	ENST00000527584	SH3TC1	Q8TE82	1336 aa		11.19	□□□□□ -0.62
PUF60-210	ENST00000527584	UFL1	O94874	794 aa		11.19	□□□□□ -0.62
PUF60-210	ENST00000527584	MRPS5	P82675	430 aa	Known RBP	11.19	□□□□□ -0.62
PUF60-210	ENST00000527584	LRP10	Q7Z4F1	713 aa		11.19	□□□□□ -0.62
PUF60-210	ENST00000527584	MTMR14	Q8NCE2	650 aa		11.19	□□□□□ -0.62
PUF60-210	ENST00000527584	C11orf16	Q9NQ32	467 aa		11.19	□□□□□ -0.62
PUF60-210	ENST00000527584	RRP7A	Q9Y3A4	280 aa	Known RBP	11.19	□□□□□ -0.62
PUF60-210	ENST00000527584	TCF20	Q9UGU0	1960 aa	Known RBP	11.18	□□□□□ -0.62
PUF60-210	ENST00000527584	GPR37L1	O60883	481 aa		11.18	□□□□□ -0.62
PUF60-210	ENST00000527584	ELN	P15502	786 aa		11.18	□□□□□ -0.62
PUF60-210	ENST00000527584	RPS8	P62241	208 aa	Known RBP	11.18	□□□□□ -0.62
PUF60-210	ENST00000527584	IRF5	Q13568	498 aa		11.18	□□□□□ -0.62
PUF60-210	ENST00000527584	TMEM31	Q5JXX7	168 aa		11.18	□□□□□ -0.62
PUF60-210	ENST00000527584	STRIP1	Q5VSL9	837 aa		11.18	□□□□□ -0.62
PUF60-210	ENST00000527584	THEG	Q9P2T0	379 aa		11.18	□□□□□ -0.62
PUF60-210	ENST00000527584	GGA1	Q9UJY5	639 aa		11.18	□□□□□ -0.62
PUF60-210	ENST00000527584	CETP	P11597	493 aa		11.17	□□□□□ -0.62
PUF60-210	ENST00000527584	MYL6B	P14649	208 aa		11.17	□□□□□ -0.62
PUF60-210	ENST00000527584	MORC1	Q86VD1	984 aa		11.17	□□□□□ -0.62
PUF60-210	ENST00000527584	NECAB3	Q96P71	396 aa	Predicted RBP	11.17	□□□□□ -0.62
PUF60-210	ENST00000527584	USP34	Q70CQ2	3546 aa		11.17	□□□□□ -0.62
PUF60-210	ENST00000527584	DOCK3	Q8IZD9	2030 aa		11.16	□□□□□ -0.62
PUF60-210	ENST00000527584	COL6A1	P12109	1028 aa		11.16	□□□□□ -0.62
PUF60-210	ENST00000527584	FLT3LG	P49771	235 aa		11.16	□□□□□ -0.62
PUF60-210	ENST00000527584	FCGRT	P55899	365 aa		11.16	□□□□□ -0.62
PUF60-210	ENST00000527584	FOXK2	Q01167	660 aa		11.16	□□□□□ -0.62
PUF60-210	ENST00000527584	VGLL4	Q14135	290 aa		11.16	□□□□□ -0.62
PUF60-210	ENST00000527584	GRIN2C	Q14957	1233 aa		11.16	□□□□□ -0.62
PUF60-210	ENST00000527584	XRN2	Q9H0D6	950 aa	Known RBP eCLIP	11.16	□□□□□ -0.62	2e-7	■■□□□ 13.6
PUF60-210	ENST00000527584	TRMT112	Q9UI30	125 aa	Known RBP	11.16	□□□□□ -0.62
PUF60-210	ENST00000527584	SPDYE5	A6NIY4	337 aa		11.15	□□□□□ -0.62
PUF60-210	ENST00000527584	BCR	P11274	1271 aa		11.15	□□□□□ -0.62
PUF60-210	ENST00000527584	BMP1	P13497	986 aa		11.15	□□□□□ -0.62
PUF60-210	ENST00000527584	SHH	Q15465	462 aa		11.15	□□□□□ -0.62
PUF60-210	ENST00000527584	DDX55	Q8NHQ9	600 aa	Known RBP eCLIP	11.15	□□□□□ -0.62
PUF60-210	ENST00000527584	ANKIB1	Q9P2G1	1089 aa		11.15	□□□□□ -0.62
PUF60-210	ENST00000527584	OGDHL	Q9ULD0	1010 aa		11.15	□□□□□ -0.62
PUF60-210	ENST00000527584	DNAH12	Q6ZR08	3092 aa		11.15	□□□□□ -0.62
PUF60-210	ENST00000527584	MAP3K9	P80192	1104 aa		11.14	□□□□□ -0.63
PUF60-210	ENST00000527584	KIAA0825	Q8IV33	1275 aa		11.14	□□□□□ -0.63
PUF60-210	ENST00000527584	ZDBF2	Q9HCK1	2354 aa		11.14	□□□□□ -0.63
PUF60-210	ENST00000527584	IRF6	O14896	467 aa		11.13	□□□□□ -0.63
PUF60-210	ENST00000527584	DIAPH1	O60610	1272 aa	Known RBP	11.13	□□□□□ -0.63
PUF60-210	ENST00000527584	RASA3	Q14644	834 aa		11.13	□□□□□ -0.63
PUF60-210	ENST00000527584	LRRC26	Q2I0M4	334 aa		11.13	□□□□□ -0.63
PUF60-210	ENST00000527584	HSP90AB3P	Q58FF7	597 aa		11.13	□□□□□ -0.63
PUF60-210	ENST00000527584	C9orf50	Q5SZB4	431 aa		11.13	□□□□□ -0.63
PUF60-210	ENST00000527584	PCDHAC2	Q9Y5I4	1007 aa		11.13	□□□□□ -0.63
PUF60-210	ENST00000527584	LTBP2	Q14767	1821 aa		11.13	□□□□□ -0.63
PUF60-210	ENST00000527584	WDFY4	Q6ZS81	3184 aa		11.13	□□□□□ -0.63
PUF60-210	ENST00000527584	CFAP54	Q96N23	3096 aa		11.12	□□□□□ -0.63
PUF60-210	ENST00000527584	MYO9B	Q13459	2157 aa		11.12	□□□□□ -0.63

Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms