RNA–Protein interactions for RNA: ENST00000527389.2

ATM-211, Transcript of ATM serine/threonine kinase, humanhuman

TSL 4

Gene ATM, Length 401 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-211ENST00000527389 KLHL23Q8NBE8 558 aa9.81□□□□□ -0.84
ATM-211ENST00000527389 GALNT11Q8NCW6 608 aa9.81□□□□□ -0.84
ATM-211ENST00000527389 OSGEPQ9NPF4 335 aa9.81□□□□□ -0.84
ATM-211ENST00000527389 C1QTNF9BB2RNN3 333 aa9.8□□□□□ -0.84
ATM-211ENST00000527389 ATP2B2Q01814 1243 aa9.8□□□□□ -0.84
ATM-211ENST00000527389 WWC3Q9ULE0 1092 aa9.8□□□□□ -0.84
ATM-211ENST00000527389 SPRED3Q2MJR0 410 aa9.79□□□□□ -0.84
ATM-211ENST00000527389 LARP7Q4G0J3 582 aaKnown RBP eCLIP9.79□□□□□ -0.84
ATM-211ENST00000527389 SHISA2Q6UWI4 295 aa9.79□□□□□ -0.84
ATM-211ENST00000527389 SETDB2Q96T68 719 aa9.79□□□□□ -0.84
ATM-211ENST00000527389 SOX17Q9H6I2 414 aaPredicted RBP9.79□□□□□ -0.84
ATM-211ENST00000527389 SEC31BQ9NQW1 1179 aa9.79□□□□□ -0.84
ATM-211ENST00000527389 LDHBP07195 334 aaKnown RBP9.78□□□□□ -0.84
ATM-211ENST00000527389 ESRRAP11474 423 aaPredicted RBP9.78□□□□□ -0.84
ATM-211ENST00000527389 CDC25BP30305 580 aa9.78□□□□□ -0.84
ATM-211ENST00000527389 FGD1P98174 961 aa9.78□□□□□ -0.84
ATM-211ENST00000527389 NRG1Q02297 640 aaPredicted RBP9.78□□□□□ -0.84
ATM-211ENST00000527389 IKBKEQ14164 716 aa9.78□□□□□ -0.84
ATM-211ENST00000527389 ADGRE1Q14246 886 aa9.78□□□□□ -0.84
ATM-211ENST00000527389 FOXD4L6Q3SYB3 417 aaPredicted RBP9.78□□□□□ -0.84
ATM-211ENST00000527389 TMCO4Q5TGY1 634 aa9.78□□□□□ -0.84
ATM-211ENST00000527389 FOXD4L3Q6VB84 417 aaPredicted RBP9.78□□□□□ -0.84
ATM-211ENST00000527389 BCO2Q9BYV7 579 aa9.78□□□□□ -0.84
ATM-211ENST00000527389 CLEC4MQ9H2X3 399 aaPredicted RBP9.78□□□□□ -0.84
ATM-211ENST00000527389 ZNF576Q9H609 170 aa9.78□□□□□ -0.84
ATM-211ENST00000527389 TMEM238LA0A1B0GVL6 79 aa9.77□□□□□ -0.85
ATM-211ENST00000527389 SOX1O00570 391 aaPredicted RBP9.77□□□□□ -0.85
ATM-211ENST00000527389 CD68P34810 354 aaPredicted RBP9.77□□□□□ -0.85
ATM-211ENST00000527389 EAPPQ56P03 285 aaPredicted RBP9.77□□□□□ -0.85
ATM-211ENST00000527389 CARD10Q9BWT7 1032 aa9.77□□□□□ -0.85
ATM-211ENST00000527389 GIPC1O14908 333 aa9.76□□□□□ -0.85
ATM-211ENST00000527389 PRPF40AO75400 957 aaKnown RBP9.76□□□□□ -0.85
ATM-211ENST00000527389 IGHA1P01876 353 aa9.76□□□□□ -0.85
ATM-211ENST00000527389 TRIM26Q12899 539 aaPredicted RBP9.76□□□□□ -0.85
ATM-211ENST00000527389 MBTPS1Q14703 1052 aa9.76□□□□□ -0.85
ATM-211ENST00000527389 SUZ12Q15022 739 aaKnown RBP9.76□□□□□ -0.85
ATM-211ENST00000527389 KLHDC7BQ96G42 594 aa9.76□□□□□ -0.85
ATM-211ENST00000527389 SRCIN1Q9C0H9 1055 aa9.76□□□□□ -0.85
ATM-211ENST00000527389 MRPL18Q9H0U6 180 aaKnown RBP9.76□□□□□ -0.85
ATM-211ENST00000527389 PROCP04070 461 aa9.75□□□□□ -0.85
ATM-211ENST00000527389 PCDH1Q08174 1060 aa9.75□□□□□ -0.85
ATM-211ENST00000527389 C19orf57Q0VDD7 668 aa9.75□□□□□ -0.85
ATM-211ENST00000527389 RPS26P11Q5JNZ5 115 aaPredicted RBP9.75□□□□□ -0.85
ATM-211ENST00000527389 FBXO33Q7Z6M2 555 aa9.75□□□□□ -0.85
ATM-211ENST00000527389 TMEM130Q8N3G9 435 aa9.75□□□□□ -0.85
ATM-211ENST00000527389 FRMD6Q96NE9 622 aa9.75□□□□□ -0.85
ATM-211ENST00000527389 EIF4EBP3O60516 100 aaPredicted RBP9.74□□□□□ -0.85
ATM-211ENST00000527389 XRCC5P13010 732 aaKnown RBP9.74□□□□□ -0.85
ATM-211ENST00000527389 ARL4DP49703 201 aa9.74□□□□□ -0.85
ATM-211ENST00000527389 HGSNATQ68CP4 663 aa9.74□□□□□ -0.85
ATM-211ENST00000527389 NXPE4Q6UWF7 544 aa9.74□□□□□ -0.85
ATM-211ENST00000527389 SLC7A3Q8WY07 619 aa9.74□□□□□ -0.85
ATM-211ENST00000527389 OSBPL7Q9BZF2 842 aa9.74□□□□□ -0.85
ATM-211ENST00000527389 PPP4R2Q9NY27 417 aa9.74□□□□□ -0.85
ATM-211ENST00000527389 KCNK4Q9NYG8 393 aa9.74□□□□□ -0.85
ATM-211ENST00000527389 SPG7Q9UQ90 795 aa9.74□□□□□ -0.85
ATM-211ENST00000527389 ADAM11O75078 769 aa9.73□□□□□ -0.85
ATM-211ENST00000527389 B3GALT4O96024 378 aa9.73□□□□□ -0.85
ATM-211ENST00000527389 ZNF423Q2M1K9 1284 aa9.73□□□□□ -0.85
ATM-211ENST00000527389 GPAT2Q6NUI2 795 aa9.73□□□□□ -0.85
ATM-211ENST00000527389 TXNRD3Q86VQ6 643 aa9.73□□□□□ -0.85
ATM-211ENST00000527389 FOXD4L4Q8WXT5 416 aaPredicted RBP9.73□□□□□ -0.85
ATM-211ENST00000527389 SPOCK3Q9BQ16 436 aa9.73□□□□□ -0.85
ATM-211ENST00000527389 ZFYVE1Q9HBF4 777 aa9.73□□□□□ -0.85
ATM-211ENST00000527389 USP21Q9UK80 565 aa9.73□□□□□ -0.85
ATM-211ENST00000527389 MSTNO14793 375 aa9.72□□□□□ -0.85
ATM-211ENST00000527389 GNA15P30679 374 aa9.72□□□□□ -0.85
ATM-211ENST00000527389 FCGRTP55899 365 aa9.72□□□□□ -0.85
ATM-211ENST00000527389 ZC3HAV1Q7Z2W4 902 aaKnown RBP9.72□□□□□ -0.85
ATM-211ENST00000527389 C3orf58Q8NDZ4 430 aa9.72□□□□□ -0.85
ATM-211ENST00000527389 F8W735 103 aaPredicted RBP9.71□□□□□ -0.86
ATM-211ENST00000527389 WISP1O95388 367 aa9.71□□□□□ -0.86
ATM-211ENST00000527389 GATA4P43694 442 aa9.71□□□□□ -0.86
ATM-211ENST00000527389 NRSN2Q9GZP1 204 aa9.71□□□□□ -0.86
ATM-211ENST00000527389 C12orf49Q9H741 205 aa9.71□□□□□ -0.86
ATM-211ENST00000527389 DDX3YO15523 660 aaKnown RBP9.7□□□□□ -0.86
ATM-211ENST00000527389 GSTT1P30711 240 aa9.7□□□□□ -0.86
ATM-211ENST00000527389 MFAP1P55081 439 aaKnown RBP9.7□□□□□ -0.86
ATM-211ENST00000527389 DTHD1Q6ZMT9 781 aa9.7□□□□□ -0.86
ATM-211ENST00000527389 Q6ZS46 218 aa9.7□□□□□ -0.86
ATM-211ENST00000527389 ANKRD24Q8TF21 1146 aa9.7□□□□□ -0.86
ATM-211ENST00000527389 WFDC12Q8WWY7 111 aa9.7□□□□□ -0.86
ATM-211ENST00000527389 DUSP9Q99956 384 aaKnown RBP9.7□□□□□ -0.86
ATM-211ENST00000527389 NOS3P29474 1203 aa9.69□□□□□ -0.86
ATM-211ENST00000527389 FAAP100Q0VG06 881 aa9.69□□□□□ -0.86
ATM-211ENST00000527389 AKTIPQ9H8T0 292 aa9.69□□□□□ -0.86
ATM-211ENST00000527389 FAM8A1Q9UBU6 413 aa9.69□□□□□ -0.86
ATM-211ENST00000527389 NLRP12P59046 1061 aa9.68□□□□□ -0.86
ATM-211ENST00000527389 DUOXA2Q1HG44 320 aa9.68□□□□□ -0.86
ATM-211ENST00000527389 KIAA1211Q6ZU35 1233 aa9.68□□□□□ -0.86
ATM-211ENST00000527389 ACAD11Q709F0 780 aa9.68□□□□□ -0.86
ATM-211ENST00000527389 UBASH3BQ8TF42 649 aa9.68□□□□□ -0.86
ATM-211ENST00000527389 SSBP4Q9BWG4 385 aaPredicted RBP9.68□□□□□ -0.86
ATM-211ENST00000527389 GSTM4Q03013 218 aa9.67□□□□□ -0.86
ATM-211ENST00000527389 DDX54Q8TDD1 881 aaKnown RBP9.67□□□□□ -0.86
ATM-211ENST00000527389 TRIM56Q9BRZ2 755 aaKnown RBP9.67□□□□□ -0.86
ATM-211ENST00000527389 RNF19AQ9NV58 838 aa9.67□□□□□ -0.86
ATM-211ENST00000527389 PPM1HQ9ULR3 514 aa9.67□□□□□ -0.86
ATM-211ENST00000527389 IREB2P48200 963 aaKnown RBP9.66□□□□□ -0.86
ATM-211ENST00000527389 DAB2P98082 770 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 77 ms