RNA–Protein interactions for RNA: ENST00000527323.5

CAPN1-208, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,086 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-208ENST00000527323 BICDL1Q6ZP65 573 aa14.61□□□□□ -0.07
CAPN1-208ENST00000527323 SDF4Q9BRK5 362 aa14.61□□□□□ -0.07
CAPN1-208ENST00000527323 APOBRQ0VD83 1088 aa14.6□□□□□ -0.07
CAPN1-208ENST00000527323 FSIP1Q8NA03 581 aa14.6□□□□□ -0.07
CAPN1-208ENST00000527323 MRFAP1L1Q96HT8 127 aa14.6□□□□□ -0.07
CAPN1-208ENST00000527323 ZNF396Q96N95 335 aaPredicted RBP14.6□□□□□ -0.07
CAPN1-208ENST00000527323 ANO10Q9NW15 660 aa14.6□□□□□ -0.07
CAPN1-208ENST00000527323 NPHP1O15259 732 aa14.6□□□□□ -0.07
CAPN1-208ENST00000527323 TNNI3KQ59H18 835 aa14.6□□□□□ -0.07
CAPN1-208ENST00000527323 RCOR1Q9UKL0 485 aa14.6□□□□□ -0.07
CAPN1-208ENST00000527323 FPGT-TNNI3KV9GXZ4 949 aa14.6□□□□□ -0.07
CAPN1-208ENST00000527323 HEG1Q9ULI3 1381 aa14.6□□□□□ -0.07
CAPN1-208ENST00000527323 NEURL1BA8MQ27 555 aa14.6□□□□□ -0.07
CAPN1-208ENST00000527323 GCKRQ14397 625 aa14.6□□□□□ -0.07
CAPN1-208ENST00000527323 CEP57L1Q8IYX8 460 aa14.6□□□□□ -0.07
CAPN1-208ENST00000527323 USP28Q96RU2 1077 aa14.6□□□□□ -0.07
CAPN1-208ENST00000527323 GOLPH3LQ9H4A5 285 aa14.6□□□□□ -0.07
CAPN1-208ENST00000527323 PTPDC1A2A3K4 754 aa14.59□□□□□ -0.07
CAPN1-208ENST00000527323 UTYO14607 1347 aa14.59□□□□□ -0.07
CAPN1-208ENST00000527323 SARM1Q6SZW1 724 aa14.59□□□□□ -0.07
CAPN1-208ENST00000527323 AOPEPQ8N6M6 819 aa14.59□□□□□ -0.07
CAPN1-208ENST00000527323 DBNDD2Q9BQY9 259 aa14.59□□□□□ -0.07
CAPN1-208ENST00000527323 ZNF215Q9UL58 517 aaPredicted RBP14.59□□□□□ -0.07
CAPN1-208ENST00000527323 ITPK1Q13572 414 aa14.59□□□□□ -0.07
CAPN1-208ENST00000527323 NKX1-1Q15270 411 aaPredicted RBP14.59□□□□□ -0.07
CAPN1-208ENST00000527323 SEPT12Q8IYM1 358 aa14.59□□□□□ -0.07
CAPN1-208ENST00000527323 NEUROD6Q96NK8 337 aa14.59□□□□□ -0.07
CAPN1-208ENST00000527323 NCOA5Q9HCD5 579 aaKnown RBP14.59□□□□□ -0.07
CAPN1-208ENST00000527323 A0A087WZG4 1122 aa14.58□□□□□ -0.07
CAPN1-208ENST00000527323 SF3A1Q15459 793 aaKnown RBP14.58□□□□□ -0.07
CAPN1-208ENST00000527323 DHX32Q7L7V1 743 aaKnown RBP14.58□□□□□ -0.07
CAPN1-208ENST00000527323 NSUN7Q8NE18 718 aaKnown RBP14.58□□□□□ -0.07
CAPN1-208ENST00000527323 FAM89AQ96GI7 184 aa14.58□□□□□ -0.07
CAPN1-208ENST00000527323 LLPHQ9BRT6 129 aaKnown RBP14.58□□□□□ -0.07
CAPN1-208ENST00000527323 NAT10Q9H0A0 1025 aaKnown RBP14.58□□□□□ -0.07
CAPN1-208ENST00000527323 N4BP2Q86UW6 1770 aaPredicted RBP14.58□□□□□ -0.08
CAPN1-208ENST00000527323 PFKFB2O60825 505 aa14.58□□□□□ -0.08
CAPN1-208ENST00000527323 SAMD1Q6SPF0 538 aaPredicted RBP14.58□□□□□ -0.08
CAPN1-208ENST00000527323 GJD4Q96KN9 370 aaPredicted RBP14.58□□□□□ -0.08
CAPN1-208ENST00000527323 SCN11AQ9UI33 1791 aa14.58□□□□□ -0.08
CAPN1-208ENST00000527323 ADD1P35611 737 aaKnown RBP14.57□□□□□ -0.08
CAPN1-208ENST00000527323 FAM160A1Q05DH4 1040 aa14.57□□□□□ -0.08
CAPN1-208ENST00000527323 NAA16Q6N069 864 aaPredicted RBP14.57□□□□□ -0.08
CAPN1-208ENST00000527323 CHST3Q7LGC8 479 aa14.57□□□□□ -0.08
CAPN1-208ENST00000527323 KIF18AQ8NI77 898 aa14.57□□□□□ -0.08
CAPN1-208ENST00000527323 DDX41Q9UJV9 622 aaKnown RBP14.57□□□□□ -0.08
CAPN1-208ENST00000527323 COL15A1P39059 1388 aa14.57□□□□□ -0.08
CAPN1-208ENST00000527323 HMGB1P09429 215 aaKnown RBP14.57□□□□□ -0.08
CAPN1-208ENST00000527323 RBM6P78332 1123 aaKnown RBP14.57□□□□□ -0.08
CAPN1-208ENST00000527323 LRP10Q7Z4F1 713 aa14.57□□□□□ -0.08
CAPN1-208ENST00000527323 SMARCC2Q8TAQ2 1214 aa14.57□□□□□ -0.08
CAPN1-208ENST00000527323 SLFNL1Q499Z3 407 aa14.57□□□□□ -0.08
CAPN1-208ENST00000527323 STOX1Q6ZVD7 989 aa14.57□□□□□ -0.08
CAPN1-208ENST00000527323 C5P01031 1676 aa14.57□□□□□ -0.08
CAPN1-208ENST00000527323 SMC2O95347 1197 aa14.56□□□□□ -0.08
CAPN1-208ENST00000527323 SNW1Q13573 536 aaKnown RBP14.56□□□□□ -0.08
CAPN1-208ENST00000527323 AMIGO3Q86WK7 504 aa14.56□□□□□ -0.08
CAPN1-208ENST00000527323 DHX40Q8IX18 779 aaKnown RBP14.56□□□□□ -0.08
CAPN1-208ENST00000527323 ZNF594Q96JF6 807 aaPredicted RBP14.56□□□□□ -0.08
CAPN1-208ENST00000527323 METTL22Q9BUU2 404 aaPredicted RBP14.56□□□□□ -0.08
CAPN1-208ENST00000527323 COPRSQ9NQ92 184 aa14.56□□□□□ -0.08
CAPN1-208ENST00000527323 GOLIM4O00461 696 aa14.56□□□□□ -0.08
CAPN1-208ENST00000527323 TRIM37O94972 964 aa14.56□□□□□ -0.08
CAPN1-208ENST00000527323 PTPN12Q05209 780 aaKnown RBP14.56□□□□□ -0.08
CAPN1-208ENST00000527323 FBXO3Q9UK99 471 aa14.56□□□□□ -0.08
CAPN1-208ENST00000527323 LOC102724428A0A0B4J2F2 783 aa14.55□□□□□ -0.08
CAPN1-208ENST00000527323 A0A1B0GVL5 298 aa14.55□□□□□ -0.08
CAPN1-208ENST00000527323 SIK1P57059 783 aa14.55□□□□□ -0.08
CAPN1-208ENST00000527323 CCAR2Q8N163 923 aaKnown RBP14.55□□□□□ -0.08
CAPN1-208ENST00000527323 ZNF397Q8NF99 534 aaPredicted RBP14.55□□□□□ -0.08
CAPN1-208ENST00000527323 ZNF609O15014 1411 aa14.55□□□□□ -0.08
CAPN1-208ENST00000527323 PLCH1Q4KWH8 1693 aa14.55□□□□□ -0.08
CAPN1-208ENST00000527323 CTDNEP1O95476 244 aa14.55□□□□□ -0.08
CAPN1-208ENST00000527323 VPS72Q15906 364 aa14.55□□□□□ -0.08
CAPN1-208ENST00000527323 FNBP4Q8N3X1 1017 aaPredicted RBP14.55□□□□□ -0.08
CAPN1-208ENST00000527323 HAUS7Q99871 368 aa14.55□□□□□ -0.08
CAPN1-208ENST00000527323 KDM3BQ7LBC6 1761 aa14.55□□□□□ -0.08
CAPN1-208ENST00000527323 CCZ1BP86790 482 aa14.55□□□□□ -0.08
CAPN1-208ENST00000527323 CCZ1P86791 482 aaPredicted RBP14.55□□□□□ -0.08
CAPN1-208ENST00000527323 ELF2Q15723 593 aa14.55□□□□□ -0.08
CAPN1-208ENST00000527323 COL14A1Q05707 1796 aaKnown RBP14.54□□□□□ -0.08
CAPN1-208ENST00000527323 GSDMDP57764 484 aa14.54□□□□□ -0.08
CAPN1-208ENST00000527323 STK38Q15208 465 aa14.54□□□□□ -0.08
CAPN1-208ENST00000527323 NYAP1Q6ZVC0 841 aa14.54□□□□□ -0.08
CAPN1-208ENST00000527323 MRPS27Q92552 414 aaKnown RBP14.54□□□□□ -0.08
CAPN1-208ENST00000527323 BIN1O00499 593 aa14.54□□□□□ -0.08
CAPN1-208ENST00000527323 KMT5BQ4FZB7 885 aa14.54□□□□□ -0.08
CAPN1-208ENST00000527323 OTUD7BQ6GQQ9 843 aa14.54□□□□□ -0.08
CAPN1-208ENST00000527323 KRT222Q8N1A0 295 aa14.54□□□□□ -0.08
CAPN1-208ENST00000527323 KBTBD3Q8NAB2 608 aa14.54□□□□□ -0.08
CAPN1-208ENST00000527323 ENGASEQ8NFI3 743 aa14.54□□□□□ -0.08
CAPN1-208ENST00000527323 ERO1AQ96HE7 468 aa14.54□□□□□ -0.08
CAPN1-208ENST00000527323 PCDHA7Q9UN72 937 aa14.54□□□□□ -0.08
CAPN1-208ENST00000527323 MORC2Q9Y6X9 1032 aaPredicted RBP14.54□□□□□ -0.08
CAPN1-208ENST00000527323 SLIT2O94813 1529 aa14.54□□□□□ -0.08
CAPN1-208ENST00000527323 DISP2A7MBM2 1401 aa14.54□□□□□ -0.08
CAPN1-208ENST00000527323 SLU7O95391 586 aaKnown RBP14.53□□□□□ -0.08
CAPN1-208ENST00000527323 POLR3DP05423 398 aaPredicted RBP14.53□□□□□ -0.08
CAPN1-208ENST00000527323 TMC6Q7Z403 805 aa14.53□□□□□ -0.08
CAPN1-208ENST00000527323 TOGARAM1Q9Y4F4 1720 aa14.53□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms