RNA–Protein interactions for RNA: ENST00000527299.1

CLNS1A-209, Transcript of chloride nucleotide-sensitive channel 1A, humanhuman

TSL 2

Gene CLNS1A, Length 387 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1A-209ENST00000527299 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP5.99□□□□□ -1.45
CLNS1A-209ENST00000527299 ZBTB39O15060 712 aa5.98□□□□□ -1.45
CLNS1A-209ENST00000527299 RXRBP28702 533 aa5.98□□□□□ -1.45
CLNS1A-209ENST00000527299 FAM69CQ0P6D2 419 aa5.98□□□□□ -1.45
CLNS1A-209ENST00000527299 CAPN12Q6ZSI9 719 aa5.98□□□□□ -1.45
CLNS1A-209ENST00000527299 SUGCTQ9HAC7 445 aa5.98□□□□□ -1.45
CLNS1A-209ENST00000527299 DZANK1Q9NVP4 752 aa5.98□□□□□ -1.45
CLNS1A-209ENST00000527299 BSDC1Q9NW68 430 aaPredicted RBP5.98□□□□□ -1.45
CLNS1A-209ENST00000527299 CNTN3Q9P232 1028 aa5.98□□□□□ -1.45
CLNS1A-209ENST00000527299 KANSL3Q9P2N6 904 aa5.98□□□□□ -1.45
CLNS1A-209ENST00000527299 SOX13Q9UN79 622 aa5.98□□□□□ -1.45
CLNS1A-209ENST00000527299 FAM95CA0A1B0GW59 222 aa5.97□□□□□ -1.45
CLNS1A-209ENST00000527299 ACPPP15309 386 aa5.97□□□□□ -1.45
CLNS1A-209ENST00000527299 RFX1P22670 979 aa5.97□□□□□ -1.45
CLNS1A-209ENST00000527299 ARL4DP49703 201 aa5.97□□□□□ -1.45
CLNS1A-209ENST00000527299 C19orf57Q0VDD7 668 aa5.97□□□□□ -1.45
CLNS1A-209ENST00000527299 NAA30Q147X3 362 aaPredicted RBP5.97□□□□□ -1.45
CLNS1A-209ENST00000527299 CDCA8Q53HL2 280 aa5.97□□□□□ -1.45
CLNS1A-209ENST00000527299 LCE4AQ5TA78 99 aa5.97□□□□□ -1.45
CLNS1A-209ENST00000527299 NUTM2GQ5VZR2 741 aa5.97□□□□□ -1.45
CLNS1A-209ENST00000527299 HGSNATQ68CP4 663 aa5.97□□□□□ -1.45
CLNS1A-209ENST00000527299 C12orf50Q8NA57 414 aaPredicted RBP5.97□□□□□ -1.45
CLNS1A-209ENST00000527299 CYP4F12Q9HCS2 524 aa5.97□□□□□ -1.45
CLNS1A-209ENST00000527299 STIM2Q9P246 746 aa5.97□□□□□ -1.45
CLNS1A-209ENST00000527299 PDE2AO00408 941 aaPredicted RBP5.96□□□□□ -1.46
CLNS1A-209ENST00000527299 SOX1O00570 391 aaPredicted RBP5.96□□□□□ -1.46
CLNS1A-209ENST00000527299 CYP26A1O43174 497 aa5.96□□□□□ -1.46
CLNS1A-209ENST00000527299 NFKBIBQ15653 356 aa5.96□□□□□ -1.46
CLNS1A-209ENST00000527299 PAOXQ6QHF9 649 aa5.96□□□□□ -1.46
CLNS1A-209ENST00000527299 MKNK1Q9BUB5 465 aa5.96□□□□□ -1.46
CLNS1A-209ENST00000527299 ADMP35318 185 aa5.95□□□□□ -1.46
CLNS1A-209ENST00000527299 ELOAQ14241 798 aaKnown RBP5.95□□□□□ -1.46
CLNS1A-209ENST00000527299 CDPF1Q6NVV7 123 aa5.95□□□□□ -1.46
CLNS1A-209ENST00000527299 XKR5Q6UX68 686 aa5.95□□□□□ -1.46
CLNS1A-209ENST00000527299 ZNF438Q7Z4V0 828 aa5.95□□□□□ -1.46
CLNS1A-209ENST00000527299 ABTB2Q8N961 1025 aa5.95□□□□□ -1.46
CLNS1A-209ENST00000527299 AGBL5Q8NDL9 886 aa5.95□□□□□ -1.46
CLNS1A-209ENST00000527299 EZH1Q92800 747 aaPredicted RBP5.95□□□□□ -1.46
CLNS1A-209ENST00000527299 HHIPQ96QV1 700 aa5.95□□□□□ -1.46
CLNS1A-209ENST00000527299 PAK6Q9NQU5 681 aaPredicted RBP5.95□□□□□ -1.46
CLNS1A-209ENST00000527299 CXXC1Q9P0U4 656 aaPredicted RBP5.95□□□□□ -1.46
CLNS1A-209ENST00000527299 ZMIZ1Q9ULJ6 1067 aa5.95□□□□□ -1.46
CLNS1A-209ENST00000527299 LOC100289279A0A1B0GTE1 492 aa5.94□□□□□ -1.46
CLNS1A-209ENST00000527299 TRPA1O75762 1119 aa5.94□□□□□ -1.46
CLNS1A-209ENST00000527299 DLGAP3O95886 979 aa5.94□□□□□ -1.46
CLNS1A-209ENST00000527299 CES1P23141 567 aa5.94□□□□□ -1.46
CLNS1A-209ENST00000527299 VN1R5Q7Z5H4 357 aa5.94□□□□□ -1.46
CLNS1A-209ENST00000527299 ZAR1Q86SH2 424 aa5.94□□□□□ -1.46
CLNS1A-209ENST00000527299 C1orf127Q8N9H9 656 aa5.94□□□□□ -1.46
CLNS1A-209ENST00000527299 TMEM102Q8N9M5 508 aaPredicted RBP5.94□□□□□ -1.46
CLNS1A-209ENST00000527299 FBLIM1Q8WUP2 373 aa5.94□□□□□ -1.46
CLNS1A-209ENST00000527299 NUDT16Q96DE0 195 aaKnown RBP5.94□□□□□ -1.46
CLNS1A-209ENST00000527299 TBC1D32Q96NH3 1257 aa5.94□□□□□ -1.46
CLNS1A-209ENST00000527299 PRKAG2Q9UGJ0 569 aa5.94□□□□□ -1.46
CLNS1A-209ENST00000527299 PAPLNO95428 1278 aa5.93□□□□□ -1.46
CLNS1A-209ENST00000527299 DRD2P14416 443 aa5.93□□□□□ -1.46
CLNS1A-209ENST00000527299 EXOSC6Q5RKV6 272 aaKnown RBP5.93□□□□□ -1.46
CLNS1A-209ENST00000527299 FLCNQ8NFG4 579 aa5.93□□□□□ -1.46
CLNS1A-209ENST00000527299 BSNDQ8WZ55 320 aa5.93□□□□□ -1.46
CLNS1A-209ENST00000527299 GATA6Q92908 595 aa5.93□□□□□ -1.46
CLNS1A-209ENST00000527299 SOX17Q9H6I2 414 aaPredicted RBP5.93□□□□□ -1.46
CLNS1A-209ENST00000527299 RPLP1P05386 114 aaKnown RBP5.92□□□□□ -1.46
CLNS1A-209ENST00000527299 USP11P51784 963 aa5.92□□□□□ -1.46
CLNS1A-209ENST00000527299 IKBKEQ14164 716 aa5.92□□□□□ -1.46
CLNS1A-209ENST00000527299 C2CD4AQ8NCU7 369 aaPredicted RBP5.92□□□□□ -1.46
CLNS1A-209ENST00000527299 NXPE3Q969Y0 559 aa5.92□□□□□ -1.46
CLNS1A-209ENST00000527299 USP26Q9BXU7 913 aa5.92□□□□□ -1.46
CLNS1A-209ENST00000527299 BCL11AQ9H165 835 aa5.92□□□□□ -1.46
CLNS1A-209ENST00000527299 FAM170BA6NMN3 283 aa5.91□□□□□ -1.46
CLNS1A-209ENST00000527299 SOX4Q06945 474 aaPredicted RBP5.91□□□□□ -1.46
CLNS1A-209ENST00000527299 STK32AQ8WU08 396 aa5.91□□□□□ -1.46
CLNS1A-209ENST00000527299 PMEPA1Q969W9 287 aa5.91□□□□□ -1.46
CLNS1A-209ENST00000527299 CHRDQ9H2X0 955 aa5.91□□□□□ -1.46
CLNS1A-209ENST00000527299 ZC3H7BQ9UGR2 993 aaKnown RBP5.91□□□□□ -1.46
CLNS1A-209ENST00000527299 FBLN7Q53RD9 439 aa5.9□□□□□ -1.46
CLNS1A-209ENST00000527299 ZNF648Q5T619 568 aaPredicted RBP5.9□□□□□ -1.46
CLNS1A-209ENST00000527299 OSMRQ99650 979 aa5.9□□□□□ -1.46
CLNS1A-209ENST00000527299 YIPF2Q9BWQ6 316 aa5.9□□□□□ -1.46
CLNS1A-209ENST00000527299 DBX1A6NMT0 343 aa5.89□□□□□ -1.47
CLNS1A-209ENST00000527299 DUSP27Q5VZP5 1158 aa5.89□□□□□ -1.47
CLNS1A-209ENST00000527299 ATCAYQ86WG3 371 aa5.89□□□□□ -1.47
CLNS1A-209ENST00000527299 ZKSCAN3Q9BRR0 538 aa5.89□□□□□ -1.47
CLNS1A-209ENST00000527299 GGNBP2Q9H3C7 697 aa5.89□□□□□ -1.47
CLNS1A-209ENST00000527299 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.89□□□□□ -1.47
CLNS1A-209ENST00000527299 CARMIL2Q6F5E8 1435 aa5.89□□□□□ -1.47
CLNS1A-209ENST00000527299 ESRRAP11474 423 aaPredicted RBP5.88□□□□□ -1.47
CLNS1A-209ENST00000527299 CYP27A1Q02318 531 aa5.88□□□□□ -1.47
CLNS1A-209ENST00000527299 SPOCD1Q6ZMY3 1216 aa5.88□□□□□ -1.47
CLNS1A-209ENST00000527299 WFDC3Q8IUB2 231 aa5.88□□□□□ -1.47
CLNS1A-209ENST00000527299 EDEM1Q92611 657 aa5.88□□□□□ -1.47
CLNS1A-209ENST00000527299 KRTAP4-11Q9BYQ6 195 aa5.88□□□□□ -1.47
CLNS1A-209ENST00000527299 NRSN2Q9GZP1 204 aa5.88□□□□□ -1.47
CLNS1A-209ENST00000527299 ADH5P11766 374 aa5.87□□□□□ -1.47
CLNS1A-209ENST00000527299 MAP7Q14244 749 aa5.87□□□□□ -1.47
CLNS1A-209ENST00000527299 ZNF124Q15973 351 aa5.87□□□□□ -1.47
CLNS1A-209ENST00000527299 ZNF765Q7L2R6 523 aa5.87□□□□□ -1.47
CLNS1A-209ENST00000527299 BCL7CQ8WUZ0 217 aaPredicted RBP5.87□□□□□ -1.47
CLNS1A-209ENST00000527299 CLP1Q92989 425 aaKnown RBP5.87□□□□□ -1.47
CLNS1A-209ENST00000527299 LRRC4CQ9HCJ2 640 aa5.87□□□□□ -1.47
CLNS1A-209ENST00000527299 SLC5A6Q9Y289 635 aa5.87□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms