RNA–Protein interactions for RNA: ENST00000527275.5

SMPD1-203, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SMPD1, Length 2,188 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-203ENST00000527275 NBR1Q14596 966 aa22.67■■□□□ 1.22
SMPD1-203ENST00000527275 WASHC4Q2M389 1173 aa22.67■■□□□ 1.22
SMPD1-203ENST00000527275 CCDC93Q567U6 631 aa22.67■■□□□ 1.22
SMPD1-203ENST00000527275 SNX21Q969T3 373 aa22.67■■□□□ 1.22
SMPD1-203ENST00000527275 ZC3H12CQ9C0D7 883 aaKnown RBP22.67■■□□□ 1.22
SMPD1-203ENST00000527275 BCS1LQ9Y276 419 aa22.67■■□□□ 1.22
SMPD1-203ENST00000527275 FRAT2O75474 233 aaPredicted RBP22.66■■□□□ 1.22
SMPD1-203ENST00000527275 CYP2E1P05181 493 aaPredicted RBP22.66■■□□□ 1.22
SMPD1-203ENST00000527275 ZNF804AQ7Z570 1209 aa22.66■■□□□ 1.22
SMPD1-203ENST00000527275 HSCBQ8IWL3 235 aa22.66■■□□□ 1.22
SMPD1-203ENST00000527275 FSD1Q9BTV5 496 aa22.66■■□□□ 1.22
SMPD1-203ENST00000527275 RTFDC1Q9BY42 306 aaPredicted RBP22.66■■□□□ 1.22
SMPD1-203ENST00000527275 RTKN2Q8IZC4 609 aa22.66■■□□□ 1.22
SMPD1-203ENST00000527275 KBTBD3Q8NAB2 608 aa22.65■■□□□ 1.22
SMPD1-203ENST00000527275 COL1A1P02452 1464 aaPredicted RBP22.65■■□□□ 1.22
SMPD1-203ENST00000527275 GRIPAP1Q4V328 841 aa22.65■■□□□ 1.22
SMPD1-203ENST00000527275 SYT17Q9BSW7 474 aa22.65■■□□□ 1.22
SMPD1-203ENST00000527275 CD209Q9NNX6 404 aa22.65■■□□□ 1.22
SMPD1-203ENST00000527275 SOGA3Q5TF21 947 aa22.64■■□□□ 1.21
SMPD1-203ENST00000527275 TDRD7Q8NHU6 1098 aaKnown RBP22.64■■□□□ 1.21
SMPD1-203ENST00000527275 EYA3Q99504 573 aa22.64■■□□□ 1.21
SMPD1-203ENST00000527275 DENND2AQ9ULE3 1009 aa22.64■■□□□ 1.21
SMPD1-203ENST00000527275 SEMA3EO15041 775 aa22.63■■□□□ 1.21
SMPD1-203ENST00000527275 CHGBP05060 677 aa22.62■■□□□ 1.21
SMPD1-203ENST00000527275 PIH1D3Q9NQM4 214 aaKnown RBP22.62■■□□□ 1.21
SMPD1-203ENST00000527275 JAG2Q9Y219 1238 aa22.62■■□□□ 1.21
SMPD1-203ENST00000527275 IL1R1P14778 569 aa22.62■■□□□ 1.21
SMPD1-203ENST00000527275 PSMD1Q99460 953 aa22.62■■□□□ 1.21
SMPD1-203ENST00000527275 SLKQ9H2G2 1235 aaPredicted RBP22.62■■□□□ 1.21
SMPD1-203ENST00000527275 TTF1Q15361 905 aaPredicted RBP22.61■■□□□ 1.21
SMPD1-203ENST00000527275 DOK7Q18PE1 504 aa22.61■■□□□ 1.21
SMPD1-203ENST00000527275 COA1Q9GZY4 146 aa22.61■■□□□ 1.21
SMPD1-203ENST00000527275 CHAF1AQ13111 956 aaPredicted RBP22.6■■□□□ 1.21
SMPD1-203ENST00000527275 CWC27Q6UX04 472 aaKnown RBP22.6■■□□□ 1.21
SMPD1-203ENST00000527275 SUPT20HQ8NEM7 779 aa22.6■■□□□ 1.21
SMPD1-203ENST00000527275 RABEP1Q15276 862 aa22.6■■□□□ 1.21
SMPD1-203ENST00000527275 AOC3Q16853 763 aa22.6■■□□□ 1.21
SMPD1-203ENST00000527275 DIAPH3Q9NSV4 1193 aa22.6■■□□□ 1.21
SMPD1-203ENST00000527275 MYH13Q9UKX3 1938 aa22.6■■□□□ 1.21
SMPD1-203ENST00000527275 MYO5AQ9Y4I1 1855 aaKnown RBP22.59■■□□□ 1.21
SMPD1-203ENST00000527275 ZBTB22O15209 634 aa22.59■■□□□ 1.21
SMPD1-203ENST00000527275 IDH1O75874 414 aaKnown RBP22.59■■□□□ 1.21
SMPD1-203ENST00000527275 KIAA2012Q0VF49 1180 aa22.59■■□□□ 1.21
SMPD1-203ENST00000527275 DBNDD1Q9H9R9 158 aa22.59■■□□□ 1.21
SMPD1-203ENST00000527275 ABCF2Q9UG63 623 aa22.59■■□□□ 1.21
SMPD1-203ENST00000527275 G3V3G9 751 aa22.59■■□□□ 1.21
SMPD1-203ENST00000527275 SLFNL1Q499Z3 407 aa22.59■■□□□ 1.21
SMPD1-203ENST00000527275 DCAF8Q5TAQ9 597 aa22.59■■□□□ 1.21
SMPD1-203ENST00000527275 SPRYD3Q8NCJ5 442 aa22.59■■□□□ 1.21
SMPD1-203ENST00000527275 ZNF277Q9NRM2 450 aaPredicted RBP22.59■■□□□ 1.21
SMPD1-203ENST00000527275 PDS5AQ29RF7 1337 aaKnown RBP22.59■■□□□ 1.21
SMPD1-203ENST00000527275 CHD4Q14839 1912 aa22.58■■□□□ 1.21
SMPD1-203ENST00000527275 PPIP5K2O43314 1243 aa22.58■■□□□ 1.21
SMPD1-203ENST00000527275 FAM227BQ96M60 508 aa22.58■■□□□ 1.21
SMPD1-203ENST00000527275 IL25Q9H293 177 aa22.58■■□□□ 1.21
SMPD1-203ENST00000527275 ANO2Q9NQ90 1003 aa22.58■■□□□ 1.21
SMPD1-203ENST00000527275 HIP1O00291 1037 aa22.57■■□□□ 1.2
SMPD1-203ENST00000527275 LRP2BPQ9P2M1 347 aa22.57■■□□□ 1.2
SMPD1-203ENST00000527275 RFX7Q2KHR2 1363 aa22.56■■□□□ 1.2
SMPD1-203ENST00000527275 NMIQ13287 307 aaPredicted RBP22.56■■□□□ 1.2
SMPD1-203ENST00000527275 SLC9C2Q5TAH2 1124 aa22.56■■□□□ 1.2
SMPD1-203ENST00000527275 DDX24Q9GZR7 859 aaKnown RBP eCLIP22.56■■□□□ 1.2
SMPD1-203ENST00000527275 TAOK3Q9H2K8 898 aa22.56■■□□□ 1.2
SMPD1-203ENST00000527275 FER1L6Q2WGJ9 1857 aa22.56■■□□□ 1.2
SMPD1-203ENST00000527275 NFKBIEO00221 500 aa22.56■■□□□ 1.2
SMPD1-203ENST00000527275 CD2BP2O95400 341 aaKnown RBP22.56■■□□□ 1.2
SMPD1-203ENST00000527275 PODNQ7Z5L7 613 aa22.56■■□□□ 1.2
SMPD1-203ENST00000527275 A0A0D9SFI3 127 aa22.55■■□□□ 1.2
SMPD1-203ENST00000527275 RNF113AO15541 343 aaKnown RBP22.55■■□□□ 1.2
SMPD1-203ENST00000527275 SGSM2O43147 1006 aa22.55■■□□□ 1.2
SMPD1-203ENST00000527275 WDR66Q8TBY9 1149 aa22.55■■□□□ 1.2
SMPD1-203ENST00000527275 ARFGEF1Q9Y6D6 1849 aa22.55■■□□□ 1.2
SMPD1-203ENST00000527275 EPB41L2O43491 1005 aaKnown RBP22.55■■□□□ 1.2
SMPD1-203ENST00000527275 ECE2O60344 883 aa22.55■■□□□ 1.2
SMPD1-203ENST00000527275 MCCP23508 829 aa22.55■■□□□ 1.2
SMPD1-203ENST00000527275 GTF2IP78347 998 aa22.55■■□□□ 1.2
SMPD1-203ENST00000527275 MAP3K12Q12852 859 aa22.55■■□□□ 1.2
SMPD1-203ENST00000527275 TICAM2Q86XR7 235 aa22.55■■□□□ 1.2
SMPD1-203ENST00000527275 KCNQ5Q9NR82 932 aa22.55■■□□□ 1.2
SMPD1-203ENST00000527275 LRRFIP1Q32MZ4 808 aaKnown RBP22.54■■□□□ 1.2
SMPD1-203ENST00000527275 SEC62Q99442 399 aaKnown RBP22.54■■□□□ 1.2
SMPD1-203ENST00000527275 PRDX5P30044 214 aa22.53■■□□□ 1.2
SMPD1-203ENST00000527275 LARGE2Q8N3Y3 721 aa22.53■■□□□ 1.2
SMPD1-203ENST00000527275 RAI14Q9P0K7 980 aa22.53■■□□□ 1.2
SMPD1-203ENST00000527275 DOCK2Q92608 1830 aa22.53■■□□□ 1.2
SMPD1-203ENST00000527275 K7ELQ4 463 aaPredicted RBP22.53■■□□□ 1.2
SMPD1-203ENST00000527275 ZFYP08048 801 aaPredicted RBP22.53■■□□□ 1.2
SMPD1-203ENST00000527275 ADD2P35612 726 aa22.53■■□□□ 1.2
SMPD1-203ENST00000527275 TTLL5Q6EMB2 1281 aa22.53■■□□□ 1.2
SMPD1-203ENST00000527275 RUFY2Q8WXA3 655 aa22.53■■□□□ 1.2
SMPD1-203ENST00000527275 SALL1Q9NSC2 1324 aa22.52■■□□□ 1.2
SMPD1-203ENST00000527275 MYH7P12883 1935 aa22.52■■□□□ 1.2
SMPD1-203ENST00000527275 PDE6AP16499 860 aa22.52■■□□□ 1.2
SMPD1-203ENST00000527275 NFKBIBQ15653 356 aa22.52■■□□□ 1.2
SMPD1-203ENST00000527275 ZSCAN25Q6NSZ9 544 aa22.52■■□□□ 1.2
SMPD1-203ENST00000527275 MAGEB6Q8N7X4 407 aa22.52■■□□□ 1.2
SMPD1-203ENST00000527275 FAM205AQ6ZU69 1335 aa22.52■■□□□ 1.2
SMPD1-203ENST00000527275 IARSP41252 1262 aaKnown RBP22.52■■□□□ 1.2
SMPD1-203ENST00000527275 MFSD14BQ5SR56 506 aa22.52■■□□□ 1.2
SMPD1-203ENST00000527275 ZMYM1Q5SVZ6 1142 aa22.52■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms