RNA–Protein interactions for RNA: ENST00000526913.5

KNL1-203, Transcript of kinetochore scaffold 1, humanhuman

TSL 1 (best)

Gene KNL1, Length 5,584 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNL1-203ENST00000526913 TIMP2P16035 220 aa1.94□□□□□ -2.1
KNL1-203ENST00000526913 APOBRQ0VD83 1088 aa1.94□□□□□ -2.1
KNL1-203ENST00000526913 NYAP1Q6ZVC0 841 aa1.94□□□□□ -2.1
KNL1-203ENST00000526913 DDX42Q86XP3 938 aaKnown RBP eCLIP1.94□□□□□ -2.1
KNL1-203ENST00000526913 RHPN1Q8TCX5 695 aa1.94□□□□□ -2.1
KNL1-203ENST00000526913 UBE2Q2Q8WVN8 375 aa1.94□□□□□ -2.1
KNL1-203ENST00000526913 EXOC2Q96KP1 924 aa1.94□□□□□ -2.1
KNL1-203ENST00000526913 SMAD5Q99717 465 aaKnown RBP1.94□□□□□ -2.1
KNL1-203ENST00000526913 PRR14Q9BWN1 585 aa1.94□□□□□ -2.1
KNL1-203ENST00000526913 RTFDC1Q9BY42 306 aaPredicted RBP1.94□□□□□ -2.1
KNL1-203ENST00000526913 MUC3BQ9H195 1237 aa1.94□□□□□ -2.1
KNL1-203ENST00000526913 RUBCNLQ9H714 662 aa1.94□□□□□ -2.1
KNL1-203ENST00000526913 KDM2BQ8NHM5 1336 aa1.94□□□□□ -2.1
KNL1-203ENST00000526913 TGFBR3LH3BV60 316 aa1.93□□□□□ -2.1
KNL1-203ENST00000526913 PTGIRP43119 386 aa1.93□□□□□ -2.1
KNL1-203ENST00000526913 RAB27AP51159 221 aa1.93□□□□□ -2.1
KNL1-203ENST00000526913 MLLT1Q03111 559 aaPredicted RBP1.93□□□□□ -2.1
KNL1-203ENST00000526913 SFSWAPQ12872 951 aaKnown RBP1.93□□□□□ -2.1
KNL1-203ENST00000526913 FAM196AQ6ZSG2 479 aa1.93□□□□□ -2.1
KNL1-203ENST00000526913 FERMT3Q86UX7 667 aa1.93□□□□□ -2.1
KNL1-203ENST00000526913 GALNT12Q8IXK2 581 aa1.93□□□□□ -2.1
KNL1-203ENST00000526913 GAL3ST3Q96A11 431 aa1.93□□□□□ -2.1
KNL1-203ENST00000526913 TIFAQ96CG3 184 aa1.93□□□□□ -2.1
KNL1-203ENST00000526913 DNAJC25Q9H1X3 360 aa1.93□□□□□ -2.1
KNL1-203ENST00000526913 EHD4Q9H223 541 aa1.93□□□□□ -2.1
KNL1-203ENST00000526913 NOB1Q9ULX3 412 aaKnown RBP1.93□□□□□ -2.1
KNL1-203ENST00000526913 ATP8A1Q9Y2Q0 1164 aa1.93□□□□□ -2.1
KNL1-203ENST00000526913 PDPK1O15530 556 aa1.93□□□□□ -2.1
KNL1-203ENST00000526913 MCM4P33991 863 aa1.93□□□□□ -2.1
KNL1-203ENST00000526913 GNALP38405 381 aa1.93□□□□□ -2.1
KNL1-203ENST00000526913 MCL1Q07820 350 aa1.93□□□□□ -2.1
KNL1-203ENST00000526913 NFE2L2Q16236 605 aa1.93□□□□□ -2.1
KNL1-203ENST00000526913 PPP2R5EQ16537 467 aa1.93□□□□□ -2.1
KNL1-203ENST00000526913 CMIPQ8IY22 773 aa1.93□□□□□ -2.1
KNL1-203ENST00000526913 ZSCAN10Q96SZ4 725 aaPredicted RBP1.93□□□□□ -2.1
KNL1-203ENST00000526913 ZIC5Q96T25 663 aa1.93□□□□□ -2.1
KNL1-203ENST00000526913 ASPSCR1Q9BZE9 553 aa1.93□□□□□ -2.1
KNL1-203ENST00000526913 PKD2L1Q9P0L9 805 aa1.93□□□□□ -2.1
KNL1-203ENST00000526913 ZBTB42B2RXF5 422 aa1.93□□□□□ -2.1
KNL1-203ENST00000526913 TNFRSF10AO00220 468 aa1.93□□□□□ -2.1
KNL1-203ENST00000526913 ALDH1L1O75891 902 aa1.93□□□□□ -2.1
KNL1-203ENST00000526913 USP5P45974 858 aa1.93□□□□□ -2.1
KNL1-203ENST00000526913 ZNF460Q14592 562 aa1.93□□□□□ -2.1
KNL1-203ENST00000526913 SEPT7Q16181 437 aaKnown RBP1.93□□□□□ -2.1
KNL1-203ENST00000526913 SEC16BQ96JE7 1060 aa1.93□□□□□ -2.1
KNL1-203ENST00000526913 TARS2Q9BW92 718 aaKnown RBP1.93□□□□□ -2.1
KNL1-203ENST00000526913 GRIP2Q9C0E4 1043 aa1.93□□□□□ -2.1
KNL1-203ENST00000526913 ABI2Q9NYB9 513 aaPredicted RBP1.93□□□□□ -2.1
KNL1-203ENST00000526913 GTF3C5Q9Y5Q8 519 aaPredicted RBP1.93□□□□□ -2.1
KNL1-203ENST00000526913 SOBPA7XYQ1 873 aa1.93□□□□□ -2.1
KNL1-203ENST00000526913 J3QW42 95 aa1.93□□□□□ -2.1
KNL1-203ENST00000526913 GIPRP48546 466 aa1.93□□□□□ -2.1
KNL1-203ENST00000526913 TTF1Q15361 905 aaPredicted RBP1.93□□□□□ -2.1
KNL1-203ENST00000526913 SF1Q15637 639 aaKnown RBP1.93□□□□□ -2.1
KNL1-203ENST00000526913 TTBK2Q6IQ55 1244 aa1.93□□□□□ -2.1
KNL1-203ENST00000526913 HPS1Q92902 700 aa1.93□□□□□ -2.1
KNL1-203ENST00000526913 SRRTQ9BXP5 876 aaKnown RBP1.93□□□□□ -2.1
KNL1-203ENST00000526913 ZC3H12CQ9C0D7 883 aaKnown RBP1.93□□□□□ -2.1
KNL1-203ENST00000526913 SUV39H2Q9H5I1 410 aa1.93□□□□□ -2.1
KNL1-203ENST00000526913 IL21Q9HBE4 155 aa1.93□□□□□ -2.1
KNL1-203ENST00000526913 VTA1Q9NP79 307 aa1.93□□□□□ -2.1
KNL1-203ENST00000526913 SEC31BQ9NQW1 1179 aa1.93□□□□□ -2.1
KNL1-203ENST00000526913 ZMYM5Q9UJ78 669 aa1.93□□□□□ -2.1
KNL1-203ENST00000526913 PDE8AO60658 829 aa1.93□□□□□ -2.1
KNL1-203ENST00000526913 VIL1P09327 827 aaKnown RBP1.93□□□□□ -2.1
KNL1-203ENST00000526913 BMP6P22004 513 aa1.93□□□□□ -2.1
KNL1-203ENST00000526913 CES1P23141 567 aa1.93□□□□□ -2.1
KNL1-203ENST00000526913 C2orf27AQ580R0 203 aa1.93□□□□□ -2.1
KNL1-203ENST00000526913 C10orf62Q5T681 223 aaPredicted RBP1.93□□□□□ -2.1
KNL1-203ENST00000526913 RNF187Q5TA31 235 aaPredicted RBP1.93□□□□□ -2.1
KNL1-203ENST00000526913 TMEM214Q6NUQ4 689 aaKnown RBP1.93□□□□□ -2.1
KNL1-203ENST00000526913 XKR5Q6UX68 686 aa1.93□□□□□ -2.1
KNL1-203ENST00000526913 APPBP2Q92624 585 aa1.93□□□□□ -2.1
KNL1-203ENST00000526913 RSRP1Q9BUV0 290 aa1.93□□□□□ -2.1
KNL1-203ENST00000526913 NT5C1AQ9BXI3 368 aa1.93□□□□□ -2.1
KNL1-203ENST00000526913 WASHC2CQ9Y4E1 1318 aa1.93□□□□□ -2.1
KNL1-203ENST00000526913 BLACEA4D250 179 aa1.92□□□□□ -2.1
KNL1-203ENST00000526913 PLEKHD1A6NEE1 506 aa1.92□□□□□ -2.1
KNL1-203ENST00000526913 MYCLP1P12525 358 aaPredicted RBP1.92□□□□□ -2.1
KNL1-203ENST00000526913 FOXC1Q12948 553 aa1.92□□□□□ -2.1
KNL1-203ENST00000526913 GALEQ14376 348 aa1.92□□□□□ -2.1
KNL1-203ENST00000526913 MTERF2Q49AM1 385 aa1.92□□□□□ -2.1
KNL1-203ENST00000526913 ZNF697Q5TEC3 545 aa1.92□□□□□ -2.1
KNL1-203ENST00000526913 TRIM67Q6ZTA4 783 aa1.92□□□□□ -2.1
KNL1-203ENST00000526913 WDR89Q96FK6 387 aaPredicted RBP1.92□□□□□ -2.1
KNL1-203ENST00000526913 NOC4LQ9BVI4 516 aaKnown RBP1.92□□□□□ -2.1
KNL1-203ENST00000526913 SENP3-EIF4A1A0A087X0R7 540 aa1.92□□□□□ -2.1
KNL1-203ENST00000526913 DCDC2BA2VCK2 349 aa1.92□□□□□ -2.1
KNL1-203ENST00000526913 CTSBP07858 339 aa1.92□□□□□ -2.1
KNL1-203ENST00000526913 FXR1P51114 621 aaKnown RBP eCLIP1.92□□□□□ -2.1
KNL1-203ENST00000526913 NFE2Q16621 373 aaPredicted RBP1.92□□□□□ -2.1
KNL1-203ENST00000526913 FAM209AQ5JX71 171 aa1.92□□□□□ -2.1
KNL1-203ENST00000526913 SLITRK4Q8IW52 837 aa1.92□□□□□ -2.1
KNL1-203ENST00000526913 RHBDD1Q8TEB9 315 aa1.92□□□□□ -2.1
KNL1-203ENST00000526913 KIFC2Q96AC6 838 aa1.92□□□□□ -2.1
KNL1-203ENST00000526913 MPHOSPH6Q99547 160 aaKnown RBP1.92□□□□□ -2.1
KNL1-203ENST00000526913 SLC30A3Q99726 388 aa1.92□□□□□ -2.1
KNL1-203ENST00000526913 SIRPGQ9P1W8 387 aa1.92□□□□□ -2.1
KNL1-203ENST00000526913 A0A1W2PQH9 124 aa1.92□□□□□ -2.1
KNL1-203ENST00000526913 MYBP10242 640 aa1.92□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms