RNA–Protein interactions for RNA: ENST00000526772.5

CTNND1-214, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 4,966 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-214ENST00000526772 PYM1Q9BRP8 204 aaKnown RBP7.38□□□□□ -1.23
CTNND1-214ENST00000526772 C1orf115Q9H7X2 142 aa7.38□□□□□ -1.23
CTNND1-214ENST00000526772 HOMER3Q9NSC5 361 aa7.38□□□□□ -1.23
CTNND1-214ENST00000526772 GJA8P48165 433 aa7.38□□□□□ -1.23
CTNND1-214ENST00000526772 TMED10P49755 219 aaKnown RBP7.38□□□□□ -1.23
CTNND1-214ENST00000526772 HNRNPMP52272 730 aaKnown RBP eCLIP7.38□□□□□ -1.235e-7■■■■□ 21
CTNND1-214ENST00000526772 CHMP4BP1P59074 171 aa7.38□□□□□ -1.23
CTNND1-214ENST00000526772 CFAP157Q5JU67 520 aa7.38□□□□□ -1.23
CTNND1-214ENST00000526772 ZNF148Q9UQR1 794 aa7.38□□□□□ -1.23
CTNND1-214ENST00000526772 GLRX3O76003 335 aaKnown RBP7.38□□□□□ -1.23
CTNND1-214ENST00000526772 KRT75O95678 551 aa7.38□□□□□ -1.23
CTNND1-214ENST00000526772 TRIM27P14373 513 aa7.38□□□□□ -1.23
CTNND1-214ENST00000526772 CDC25BP30305 580 aa7.38□□□□□ -1.23
CTNND1-214ENST00000526772 GNGT1P63211 74 aa7.38□□□□□ -1.23
CTNND1-214ENST00000526772 NOP14P78316 857 aaKnown RBP7.38□□□□□ -1.23
CTNND1-214ENST00000526772 APBA1Q02410 837 aa7.38□□□□□ -1.23
CTNND1-214ENST00000526772 SAFB2Q14151 953 aaKnown RBP eCLIP7.38□□□□□ -1.23
CTNND1-214ENST00000526772 ATP2B3Q16720 1220 aa7.38□□□□□ -1.23
CTNND1-214ENST00000526772 HOOK3Q86VS8 718 aa7.38□□□□□ -1.23
CTNND1-214ENST00000526772 CCDC63Q8NA47 563 aa7.38□□□□□ -1.23
CTNND1-214ENST00000526772 SEPT8Q92599 483 aa7.38□□□□□ -1.23
CTNND1-214ENST00000526772 RRP36Q96EU6 259 aaKnown RBP7.38□□□□□ -1.23
CTNND1-214ENST00000526772 CNGB3Q9NQW8 809 aa7.38□□□□□ -1.23
CTNND1-214ENST00000526772 ARHGEF12Q9NZN5 1544 aa7.38□□□□□ -1.23
CTNND1-214ENST00000526772 RPGRIP1LQ68CZ1 1315 aa7.37□□□□□ -1.23
CTNND1-214ENST00000526772 PRR16Q569H4 304 aa7.37□□□□□ -1.23
CTNND1-214ENST00000526772 SSH1Q8WYL5 1049 aa7.37□□□□□ -1.23
CTNND1-214ENST00000526772 TSR2Q969E8 191 aaKnown RBP7.37□□□□□ -1.23
CTNND1-214ENST00000526772 TRAK1Q9UPV9 953 aa7.37□□□□□ -1.23
CTNND1-214ENST00000526772 ASXL1Q8IXJ9 1541 aa7.37□□□□□ -1.23
CTNND1-214ENST00000526772 OPHN1O60890 802 aa7.37□□□□□ -1.23
CTNND1-214ENST00000526772 TBCAO75347 108 aaKnown RBP7.37□□□□□ -1.23
CTNND1-214ENST00000526772 CCT5P48643 541 aa7.37□□□□□ -1.23
CTNND1-214ENST00000526772 E2F5Q15329 346 aa7.37□□□□□ -1.23
CTNND1-214ENST00000526772 NAIF1Q69YI7 327 aaPredicted RBP7.37□□□□□ -1.23
CTNND1-214ENST00000526772 PRPF31Q8WWY3 499 aaKnown RBP7.37□□□□□ -1.23
CTNND1-214ENST00000526772 ATP2A3Q93084 1043 aa7.37□□□□□ -1.23
CTNND1-214ENST00000526772 BHMTQ93088 406 aa7.37□□□□□ -1.23
CTNND1-214ENST00000526772 RPGRIP1Q96KN7 1286 aa7.37□□□□□ -1.23
CTNND1-214ENST00000526772 OLFM3Q96PB7 478 aa7.37□□□□□ -1.23
CTNND1-214ENST00000526772 HMG20BQ9P0W2 317 aa7.37□□□□□ -1.23
CTNND1-214ENST00000526772 PCDHB15Q9Y5E8 787 aa7.37□□□□□ -1.23
CTNND1-214ENST00000526772 PTPRCP08575 1304 aa7.37□□□□□ -1.23
CTNND1-214ENST00000526772 TMEM232C9JQI7 657 aa7.37□□□□□ -1.23
CTNND1-214ENST00000526772 H0YC42 278 aa7.37□□□□□ -1.23
CTNND1-214ENST00000526772 KRT4P19013 534 aa7.37□□□□□ -1.23
CTNND1-214ENST00000526772 ATP5DP30049 168 aa7.37□□□□□ -1.23
CTNND1-214ENST00000526772 TPD52P55327 224 aaPredicted RBP7.37□□□□□ -1.23
CTNND1-214ENST00000526772 SF3B2Q13435 895 aaKnown RBP7.37□□□□□ -1.23
CTNND1-214ENST00000526772 TEX9Q8N6V9 391 aa7.37□□□□□ -1.23
CTNND1-214ENST00000526772 CNNM3Q8NE01 707 aa7.37□□□□□ -1.23
CTNND1-214ENST00000526772 TRIM11Q96F44 468 aa7.37□□□□□ -1.23
CTNND1-214ENST00000526772 NEK1Q96PY6 1258 aa7.37□□□□□ -1.23
CTNND1-214ENST00000526772 NRDE2Q9H7Z3 1164 aa7.37□□□□□ -1.23
CTNND1-214ENST00000526772 PHAXQ9H814 394 aaKnown RBP7.37□□□□□ -1.23
CTNND1-214ENST00000526772 TSPYL4Q9UJ04 414 aa7.37□□□□□ -1.23
CTNND1-214ENST00000526772 EIF2AK4Q9P2K8 1649 aaKnown RBP7.37□□□□□ -1.23
CTNND1-214ENST00000526772 SEC24BO95487 1268 aa7.37□□□□□ -1.23
CTNND1-214ENST00000526772 CSB-PGBD3P0DP91 1061 aa7.37□□□□□ -1.23
CTNND1-214ENST00000526772 SYT1P21579 422 aa7.37□□□□□ -1.23
CTNND1-214ENST00000526772 MAP3K21Q5TCX8 1036 aa7.37□□□□□ -1.23
CTNND1-214ENST00000526772 MAP7D3Q8IWC1 876 aa7.37□□□□□ -1.23
CTNND1-214ENST00000526772 FSIP1Q8NA03 581 aa7.37□□□□□ -1.23
CTNND1-214ENST00000526772 MSANTD4Q8NCY6 345 aa7.37□□□□□ -1.23
CTNND1-214ENST00000526772 CTNNA3Q9UI47 895 aa7.37□□□□□ -1.23
CTNND1-214ENST00000526772 CNPY2Q9Y2B0 182 aa7.37□□□□□ -1.23
CTNND1-214ENST00000526772 TMPOP42166 694 aaKnown RBP7.36□□□□□ -1.23
CTNND1-214ENST00000526772 MMP14P50281 582 aa7.36□□□□□ -1.23
CTNND1-214ENST00000526772 NEK2P51955 445 aa7.36□□□□□ -1.23
CTNND1-214ENST00000526772 KIF5AQ12840 1032 aa7.36□□□□□ -1.23
CTNND1-214ENST00000526772 OLFML1Q6UWY5 402 aa7.36□□□□□ -1.23
CTNND1-214ENST00000526772 FBXO41Q8TF61 875 aa7.36□□□□□ -1.23
CTNND1-214ENST00000526772 BICD1Q96G01 975 aa7.36□□□□□ -1.23
CTNND1-214ENST00000526772 CCDC77Q9BR77 488 aa7.36□□□□□ -1.23
CTNND1-214ENST00000526772 DDX23Q9BUQ8 820 aaKnown RBP7.36□□□□□ -1.23
CTNND1-214ENST00000526772 MARCH6O60337 910 aa7.36□□□□□ -1.23
CTNND1-214ENST00000526772 WDHD1O75717 1129 aaPredicted RBP7.36□□□□□ -1.23
CTNND1-214ENST00000526772 SPAG1Q07617 926 aa7.36□□□□□ -1.23
CTNND1-214ENST00000526772 GNPTABQ3T906 1256 aa7.36□□□□□ -1.23
CTNND1-214ENST00000526772 CCDC144CPQ8IYA2 1237 aa7.36□□□□□ -1.23
CTNND1-214ENST00000526772 ST13P4Q8IZP2 240 aaPredicted RBP7.36□□□□□ -1.23
CTNND1-214ENST00000526772 HELLSQ9NRZ9 838 aa7.36□□□□□ -1.23
CTNND1-214ENST00000526772 PDS5BQ9NTI5 1447 aa7.36□□□□□ -1.23
CTNND1-214ENST00000526772 MGEA5O60502 916 aa7.36□□□□□ -1.23
CTNND1-214ENST00000526772 TMCC1O94876 653 aa7.36□□□□□ -1.23
CTNND1-214ENST00000526772 SASH1O94885 1247 aa7.36□□□□□ -1.23
CTNND1-214ENST00000526772 UBASH3AP57075 661 aa7.36□□□□□ -1.23
CTNND1-214ENST00000526772 PSMC1P62191 440 aaKnown RBP7.36□□□□□ -1.23
CTNND1-214ENST00000526772 ZBTB16Q05516 673 aa7.36□□□□□ -1.23
CTNND1-214ENST00000526772 TRPC3Q13507 836 aa7.36□□□□□ -1.23
CTNND1-214ENST00000526772 TMCO4Q5TGY1 634 aa7.36□□□□□ -1.23
CTNND1-214ENST00000526772 UBE2Q1Q7Z7E8 422 aa7.36□□□□□ -1.23
CTNND1-214ENST00000526772 SUGP1Q8IWZ8 645 aaKnown RBP7.36□□□□□ -1.23
CTNND1-214ENST00000526772 RNF217Q8TC41 542 aa7.36□□□□□ -1.23
CTNND1-214ENST00000526772 FGD4Q96M96 766 aa7.36□□□□□ -1.23
CTNND1-214ENST00000526772 MAN1A2O60476 641 aa7.36□□□□□ -1.23
CTNND1-214ENST00000526772 TRIM22Q8IYM9 498 aa7.36□□□□□ -1.23
CTNND1-214ENST00000526772 IQCDQ96DY2 449 aa7.36□□□□□ -1.23
CTNND1-214ENST00000526772 KIF1BPQ96EK5 621 aa7.36□□□□□ -1.23
CTNND1-214ENST00000526772 TTC1Q99614 292 aa7.36□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms