RNA–Protein interactions for RNA: ENST00000526044.5

USP48-211, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 3

Gene USP48, Length 549 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-211ENST00000526044 ZSCAN29Q8IWY8 852 aaPredicted RBP7.16□□□□□ -1.26
USP48-211ENST00000526044 IL22RA1Q8N6P7 574 aa7.16□□□□□ -1.26
USP48-211ENST00000526044 DNAJC25Q9H1X3 360 aa7.16□□□□□ -1.26
USP48-211ENST00000526044 DZANK1Q9NVP4 752 aa7.16□□□□□ -1.26
USP48-211ENST00000526044 TRIM33Q9UPN9 1127 aa7.16□□□□□ -1.26
USP48-211ENST00000526044 RUSC2Q8N2Y8 1516 aa7.16□□□□□ -1.26
USP48-211ENST00000526044 ZNF608Q9ULD9 1512 aaPredicted RBP7.16□□□□□ -1.26
USP48-211ENST00000526044 POLR3DP05423 398 aaPredicted RBP7.15□□□□□ -1.26
USP48-211ENST00000526044 RAC1P63000 192 aa7.15□□□□□ -1.26
USP48-211ENST00000526044 PLCB3Q01970 1234 aa7.15□□□□□ -1.26
USP48-211ENST00000526044 NRG1Q02297 640 aaPredicted RBP7.15□□□□□ -1.26
USP48-211ENST00000526044 ORC1Q13415 861 aa7.15□□□□□ -1.26
USP48-211ENST00000526044 OSMRQ99650 979 aa7.15□□□□□ -1.26
USP48-211ENST00000526044 GAPVD1Q14C86 1478 aa7.15□□□□□ -1.27
USP48-211ENST00000526044 WDR97A6NE52 1622 aa7.15□□□□□ -1.27
USP48-211ENST00000526044 A0A0A0MRY4 1105 aa7.14□□□□□ -1.27
USP48-211ENST00000526044 NFKBIEO00221 500 aa7.14□□□□□ -1.27
USP48-211ENST00000526044 PDE2AO00408 941 aaPredicted RBP7.14□□□□□ -1.27
USP48-211ENST00000526044 EIF1AYO14602 144 aaKnown RBP7.14□□□□□ -1.27
USP48-211ENST00000526044 GALNT12Q8IXK2 581 aa7.14□□□□□ -1.27
USP48-211ENST00000526044 DTWD1Q8N5C7 304 aa7.14□□□□□ -1.27
USP48-211ENST00000526044 ASB16Q96NS5 453 aa7.14□□□□□ -1.27
USP48-211ENST00000526044 POP1Q99575 1024 aaKnown RBP7.14□□□□□ -1.27
USP48-211ENST00000526044 LACRTQ9GZZ8 138 aa7.14□□□□□ -1.27
USP48-211ENST00000526044 MUC3BQ9H195 1237 aa7.14□□□□□ -1.27
USP48-211ENST00000526044 EEA1Q15075 1411 aa7.13□□□□□ -1.27
USP48-211ENST00000526044 FAM177BA6PVY3 158 aa7.13□□□□□ -1.27
USP48-211ENST00000526044 TREHO43280 583 aa7.13□□□□□ -1.27
USP48-211ENST00000526044 HYAL3O43820 417 aaPredicted RBP7.13□□□□□ -1.27
USP48-211ENST00000526044 ACPPP15309 386 aa7.13□□□□□ -1.27
USP48-211ENST00000526044 PTPRAP18433 802 aa7.13□□□□□ -1.27
USP48-211ENST00000526044 CDC27P30260 824 aa7.13□□□□□ -1.27
USP48-211ENST00000526044 DSC3Q14574 896 aa7.13□□□□□ -1.27
USP48-211ENST00000526044 USPL1Q5W0Q7 1092 aa7.13□□□□□ -1.27
USP48-211ENST00000526044 TXNRD3Q86VQ6 643 aa7.13□□□□□ -1.27
USP48-211ENST00000526044 TMEM102Q8N9M5 508 aaPredicted RBP7.13□□□□□ -1.27
USP48-211ENST00000526044 CSRNP1Q96S65 589 aa7.13□□□□□ -1.27
USP48-211ENST00000526044 ZKSCAN3Q9BRR0 538 aa7.13□□□□□ -1.27
USP48-211ENST00000526044 GZF1Q9H116 711 aaPredicted RBP7.13□□□□□ -1.27
USP48-211ENST00000526044 GOLGA2P5Q9HBQ8 144 aa7.13□□□□□ -1.27
USP48-211ENST00000526044 PPME1Q9Y570 386 aa7.13□□□□□ -1.27
USP48-211ENST00000526044 GRIN2BQ13224 1484 aa7.12□□□□□ -1.27
USP48-211ENST00000526044 TRPA1O75762 1119 aa7.12□□□□□ -1.27
USP48-211ENST00000526044 ELNP15502 786 aa7.12□□□□□ -1.27
USP48-211ENST00000526044 ADGRE1Q14246 886 aa7.12□□□□□ -1.27
USP48-211ENST00000526044 PEAR1Q5VY43 1037 aaPredicted RBP7.12□□□□□ -1.27
USP48-211ENST00000526044 FMR1NBQ8N0W7 255 aaPredicted RBP7.12□□□□□ -1.27
USP48-211ENST00000526044 NXPE3Q969Y0 559 aa7.12□□□□□ -1.27
USP48-211ENST00000526044 TP53INP1Q96A56 240 aa7.12□□□□□ -1.27
USP48-211ENST00000526044 ADAM19Q9H013 955 aa7.12□□□□□ -1.27
USP48-211ENST00000526044 LATS2Q9NRM7 1088 aa7.12□□□□□ -1.27
USP48-211ENST00000526044 ABCA5Q8WWZ7 1642 aa7.12□□□□□ -1.27
USP48-211ENST00000526044 MBTPS1Q14703 1052 aa7.11□□□□□ -1.27
USP48-211ENST00000526044 FBXO11Q86XK2 927 aa7.11□□□□□ -1.27
USP48-211ENST00000526044 CCDC74AQ96AQ1 378 aa7.11□□□□□ -1.27
USP48-211ENST00000526044 HHIPQ96QV1 700 aa7.11□□□□□ -1.27
USP48-211ENST00000526044 SRA1Q9HD15 236 aaKnown RBP7.11□□□□□ -1.27
USP48-211ENST00000526044 EIF4G3O43432 1585 aaKnown RBP7.11□□□□□ -1.27
USP48-211ENST00000526044 PBRM1Q86U86 1689 aa7.1□□□□□ -1.27
USP48-211ENST00000526044 A0A1W2PP55 124 aa7.1□□□□□ -1.27
USP48-211ENST00000526044 ZBTB7CA1YPR0 619 aa7.1□□□□□ -1.27
USP48-211ENST00000526044 KIAA0319Q5VV43 1072 aa7.1□□□□□ -1.27
USP48-211ENST00000526044 ADAMTSL4Q6UY14 1074 aa7.1□□□□□ -1.27
USP48-211ENST00000526044 MAP4K3Q8IVH8 894 aa7.1□□□□□ -1.27
USP48-211ENST00000526044 LENG1Q96BZ8 264 aaPredicted RBP7.1□□□□□ -1.27
USP48-211ENST00000526044 SH2B1Q9NRF2 756 aaPredicted RBP7.1□□□□□ -1.27
USP48-211ENST00000526044 ERICH3Q5RHP9 1530 aa7.1□□□□□ -1.27
USP48-211ENST00000526044 CARMIL1Q5VZK9 1371 aa7.09□□□□□ -1.27
USP48-211ENST00000526044 LINC01387J3KSC0 135 aa7.09□□□□□ -1.27
USP48-211ENST00000526044 CABP4P57796 275 aa7.09□□□□□ -1.27
USP48-211ENST00000526044 FAM117BQ6P1L5 589 aa7.09□□□□□ -1.27
USP48-211ENST00000526044 DCAF11Q8TEB1 546 aa7.09□□□□□ -1.27
USP48-211ENST00000526044 BSNDQ8WZ55 320 aa7.09□□□□□ -1.27
USP48-211ENST00000526044 BHLHE41Q9C0J9 482 aaPredicted RBP7.09□□□□□ -1.27
USP48-211ENST00000526044 NPHS2Q9NP85 383 aa7.09□□□□□ -1.27
USP48-211ENST00000526044 USP21Q9UK80 565 aa7.09□□□□□ -1.27
USP48-211ENST00000526044 DEAF1O75398 565 aaPredicted RBP7.08□□□□□ -1.28
USP48-211ENST00000526044 SELPP16109 830 aa7.08□□□□□ -1.28
USP48-211ENST00000526044 EPHA1P21709 976 aa7.08□□□□□ -1.28
USP48-211ENST00000526044 CDC25BP30305 580 aa7.08□□□□□ -1.28
USP48-211ENST00000526044 MAPK8P45983 427 aa7.08□□□□□ -1.28
USP48-211ENST00000526044 FMR1Q06787 632 aaKnown RBP eCLIP7.08□□□□□ -1.28
USP48-211ENST00000526044 SETDB1Q15047 1291 aa7.08□□□□□ -1.28
USP48-211ENST00000526044 ENOX2Q16206 610 aaKnown RBP7.08□□□□□ -1.28
USP48-211ENST00000526044 CCNJLQ8IV13 435 aa7.08□□□□□ -1.28
USP48-211ENST00000526044 ASAP3Q8TDY4 903 aa7.08□□□□□ -1.28
USP48-211ENST00000526044 EHD4Q9H223 541 aa7.08□□□□□ -1.28
USP48-211ENST00000526044 LIN7BQ9HAP6 207 aa7.08□□□□□ -1.28
USP48-211ENST00000526044 NLRP2Q9NX02 1062 aa7.08□□□□□ -1.28
USP48-211ENST00000526044 SNAPC4Q5SXM2 1469 aa7.07□□□□□ -1.28
USP48-211ENST00000526044 MAGI1Q96QZ7 1491 aaPredicted RBP7.07□□□□□ -1.28
USP48-211ENST00000526044 PNMA6FA0A0J9YX94 578 aa7.07□□□□□ -1.28
USP48-211ENST00000526044 LOC105371045A0A1W2PR82 267 aa7.07□□□□□ -1.28
USP48-211ENST00000526044 GADD45BO75293 160 aaPredicted RBP7.07□□□□□ -1.28
USP48-211ENST00000526044 IGF2-ASQ6U949 168 aa7.07□□□□□ -1.28
USP48-211ENST00000526044 TCF12Q99081 682 aa7.07□□□□□ -1.28
USP48-211ENST00000526044 SOX13Q9UN79 622 aa7.07□□□□□ -1.28
USP48-211ENST00000526044 FHAD1B1AJZ9 1412 aa7.07□□□□□ -1.28
USP48-211ENST00000526044 CUL7Q14999 1698 aa7.06□□□□□ -1.28
USP48-211ENST00000526044 H3BRJ5 948 aa7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms