RNA–Protein interactions for RNA: ENST00000525508.1

CHD7-203, Transcript of chromodomain helicase DNA binding protein 7, humanhuman

TSL 5 BASIC

Gene CHD7, Length 4,777 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7-203ENST00000525508 PHKBQ93100 1093 aa9.5□□□□□ -0.89
CHD7-203ENST00000525508 NYXQ9GZU5 481 aa9.5□□□□□ -0.89
CHD7-203ENST00000525508 GPCPD1Q9NPB8 672 aa9.5□□□□□ -0.89
CHD7-203ENST00000525508 YEATS2Q9ULM3 1422 aa9.5□□□□□ -0.89
CHD7-203ENST00000525508 CASQ1P31415 396 aa9.5□□□□□ -0.89
CHD7-203ENST00000525508 AMPD3Q01432 767 aa9.5□□□□□ -0.89
CHD7-203ENST00000525508 ZNF174Q15697 407 aa9.5□□□□□ -0.89
CHD7-203ENST00000525508 MSL1Q68DK7 614 aa9.5□□□□□ -0.89
CHD7-203ENST00000525508 TMCO3Q6UWJ1 677 aa9.5□□□□□ -0.89
CHD7-203ENST00000525508 CRACR2AQ9BSW2 395 aa9.5□□□□□ -0.89
CHD7-203ENST00000525508 EXOC1Q9NV70 894 aa9.5□□□□□ -0.89
CHD7-203ENST00000525508 EIF4G3O43432 1585 aaKnown RBP9.5□□□□□ -0.89
CHD7-203ENST00000525508 FCHSD1Q86WN1 690 aa9.5□□□□□ -0.89
CHD7-203ENST00000525508 SMARCC2Q8TAQ2 1214 aa9.5□□□□□ -0.89
CHD7-203ENST00000525508 JDP2Q8WYK2 163 aa9.5□□□□□ -0.89
CHD7-203ENST00000525508 GSTTP1A0A1W2PQM5 241 aa9.49□□□□□ -0.89
CHD7-203ENST00000525508 FAM170AA1A519 330 aa9.49□□□□□ -0.89
CHD7-203ENST00000525508 VWA3AA6NCI4 1184 aa9.49□□□□□ -0.89
CHD7-203ENST00000525508 SKILP12757 684 aa9.49□□□□□ -0.89
CHD7-203ENST00000525508 CTDSPL2Q05D32 466 aa9.49□□□□□ -0.89
CHD7-203ENST00000525508 HLTFQ14527 1009 aaKnown RBP eCLIP9.49□□□□□ -0.891e-6■□□□□ 8.3
CHD7-203ENST00000525508 PROSER3Q2NL68 480 aa9.49□□□□□ -0.89
CHD7-203ENST00000525508 VPS36Q86VN1 386 aa9.49□□□□□ -0.89
CHD7-203ENST00000525508 BICD1Q96G01 975 aa9.49□□□□□ -0.89
CHD7-203ENST00000525508 SPAG5Q96R06 1193 aa9.49□□□□□ -0.89
CHD7-203ENST00000525508 TCHPQ9BT92 498 aa9.49□□□□□ -0.89
CHD7-203ENST00000525508 GOPCQ9HD26 462 aa9.49□□□□□ -0.89
CHD7-203ENST00000525508 JADE2Q9NQC1 790 aa9.49□□□□□ -0.89
CHD7-203ENST00000525508 TBCAO75347 108 aaKnown RBP9.49□□□□□ -0.89
CHD7-203ENST00000525508 GIGYF1O75420 1035 aaPredicted RBP9.49□□□□□ -0.89
CHD7-203ENST00000525508 NEBLO76041 1014 aa9.49□□□□□ -0.89
CHD7-203ENST00000525508 HIBADHP31937 336 aaKnown RBP9.49□□□□□ -0.89
CHD7-203ENST00000525508 LETM2Q2VYF4 491 aa9.49□□□□□ -0.89
CHD7-203ENST00000525508 CCDC191Q8NCU4 936 aa9.49□□□□□ -0.89
CHD7-203ENST00000525508 TRERF1Q96PN7 1200 aa9.49□□□□□ -0.89
CHD7-203ENST00000525508 TRPM2O94759 1503 aa9.49□□□□□ -0.89
CHD7-203ENST00000525508 SLC27A2O14975 620 aa9.49□□□□□ -0.89
CHD7-203ENST00000525508 EDC4Q6P2E9 1401 aaKnown RBP9.49□□□□□ -0.89
CHD7-203ENST00000525508 CMTR1Q8N1G2 835 aaKnown RBP9.49□□□□□ -0.89
CHD7-203ENST00000525508 SNX21Q969T3 373 aa9.49□□□□□ -0.89
CHD7-203ENST00000525508 BCCIPQ9P287 314 aaKnown RBP eCLIP9.49□□□□□ -0.89
CHD7-203ENST00000525508 V9GY48 417 aaPredicted RBP9.49□□□□□ -0.89
CHD7-203ENST00000525508 SPDYE4A6NLX3 237 aa9.48□□□□□ -0.89
CHD7-203ENST00000525508 JAK2O60674 1132 aa9.48□□□□□ -0.89
CHD7-203ENST00000525508 TYRO3Q06418 890 aa9.48□□□□□ -0.89
CHD7-203ENST00000525508 SNX14Q9Y5W7 946 aa9.48□□□□□ -0.89
CHD7-203ENST00000525508 SNW1Q13573 536 aaKnown RBP9.48□□□□□ -0.89
CHD7-203ENST00000525508 TXLNBQ8N3L3 684 aa9.48□□□□□ -0.89
CHD7-203ENST00000525508 FAM200AQ8TCP9 573 aa9.48□□□□□ -0.89
CHD7-203ENST00000525508 STAMQ92783 540 aa9.48□□□□□ -0.89
CHD7-203ENST00000525508 EAF2Q96CJ1 260 aaPredicted RBP9.48□□□□□ -0.89
CHD7-203ENST00000525508 HDAC9Q9UKV0 1011 aa9.48□□□□□ -0.89
CHD7-203ENST00000525508 PLEKHG3A1L390 1219 aa9.48□□□□□ -0.89
CHD7-203ENST00000525508 SGSM2O43147 1006 aa9.48□□□□□ -0.89
CHD7-203ENST00000525508 PAFAH1B1P43034 410 aa9.48□□□□□ -0.89
CHD7-203ENST00000525508 PDE8AO60658 829 aa9.48□□□□□ -0.89
CHD7-203ENST00000525508 USO1O60763 962 aaKnown RBP9.48□□□□□ -0.89
CHD7-203ENST00000525508 EIF3JO75822 258 aaKnown RBP9.48□□□□□ -0.89
CHD7-203ENST00000525508 RGS22Q8NE09 1264 aa9.48□□□□□ -0.89
CHD7-203ENST00000525508 DNAI1Q9UI46 699 aa9.48□□□□□ -0.89
CHD7-203ENST00000525508 ASAP1Q9ULH1 1129 aa9.48□□□□□ -0.89
CHD7-203ENST00000525508 ZFYVE9O95405 1425 aa9.48□□□□□ -0.89
CHD7-203ENST00000525508 WDHD1O75717 1129 aaPredicted RBP9.47□□□□□ -0.89
CHD7-203ENST00000525508 FGFR1OPO95684 399 aaKnown RBP9.47□□□□□ -0.89
CHD7-203ENST00000525508 JAKMIP3Q5VZ66 844 aa9.47□□□□□ -0.89
CHD7-203ENST00000525508 METP08581 1390 aa9.47□□□□□ -0.89
CHD7-203ENST00000525508 TMEM2Q9UHN6 1383 aa9.47□□□□□ -0.89
CHD7-203ENST00000525508 CTTNBP2Q8WZ74 1663 aa9.47□□□□□ -0.89
CHD7-203ENST00000525508 SPDYE3A6NKU9 549 aa9.47□□□□□ -0.89
CHD7-203ENST00000525508 POTEJP0CG39 1038 aa9.47□□□□□ -0.89
CHD7-203ENST00000525508 HMGB2P26583 209 aaKnown RBP9.47□□□□□ -0.89
CHD7-203ENST00000525508 PUM3Q15397 648 aaKnown RBP9.47□□□□□ -0.89
CHD7-203ENST00000525508 MAPKAPK5Q8IW41 473 aa9.47□□□□□ -0.89
CHD7-203ENST00000525508 ZNF408Q9H9D4 720 aa9.47□□□□□ -0.89
CHD7-203ENST00000525508 RTL1A6NKG5 1358 aa9.47□□□□□ -0.89
CHD7-203ENST00000525508 KIF21AQ7Z4S6 1674 aa9.47□□□□□ -0.89
CHD7-203ENST00000525508 NEURL1BA8MQ27 555 aa9.47□□□□□ -0.89
CHD7-203ENST00000525508 KIF20AO95235 890 aa9.47□□□□□ -0.89
CHD7-203ENST00000525508 GNAQP50148 359 aa9.47□□□□□ -0.89
CHD7-203ENST00000525508 CETN1Q12798 172 aa9.47□□□□□ -0.89
CHD7-203ENST00000525508 FAM212AQ96EL1 285 aa9.47□□□□□ -0.89
CHD7-203ENST00000525508 PLCD4Q9BRC7 762 aa9.47□□□□□ -0.89
CHD7-203ENST00000525508 CCDC87Q9NVE4 849 aa9.47□□□□□ -0.89
CHD7-203ENST00000525508 GYG1P46976 350 aa9.47□□□□□ -0.89
CHD7-203ENST00000525508 LRRC24Q50LG9 513 aa9.47□□□□□ -0.89
CHD7-203ENST00000525508 USP21Q9UK80 565 aa9.47□□□□□ -0.89
CHD7-203ENST00000525508 FAM47AQ5JRC9 791 aa9.46□□□□□ -0.89
CHD7-203ENST00000525508 KANK3Q6NY19 840 aa9.46□□□□□ -0.89
CHD7-203ENST00000525508 DPH6Q7L8W6 267 aa9.46□□□□□ -0.89
CHD7-203ENST00000525508 KBTBD3Q8NAB2 608 aa9.46□□□□□ -0.89
CHD7-203ENST00000525508 ZNF532Q9HCE3 1301 aa9.46□□□□□ -0.89
CHD7-203ENST00000525508 CPXCR1Q8N123 301 aa9.46□□□□□ -0.89
CHD7-203ENST00000525508 APPBP2Q92624 585 aa9.46□□□□□ -0.89
CHD7-203ENST00000525508 C6orf50Q9HD87 102 aa9.46□□□□□ -0.89
CHD7-203ENST00000525508 ATP10AO60312 1499 aa9.46□□□□□ -0.9
CHD7-203ENST00000525508 RPS6KB1P23443 525 aa9.46□□□□□ -0.9
CHD7-203ENST00000525508 CTNNA2P26232 953 aa9.46□□□□□ -0.9
CHD7-203ENST00000525508 RAD51AP2Q09MP3 1159 aa9.46□□□□□ -0.9
CHD7-203ENST00000525508 RRP36Q96EU6 259 aaKnown RBP9.46□□□□□ -0.9
CHD7-203ENST00000525508 EHMT1Q9H9B1 1298 aa9.46□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms