RNA–Protein interactions for RNA: ENST00000525359.1

CLNS1A-203, Transcript of chloride nucleotide-sensitive channel 1A, humanhuman

TSL 2

Gene CLNS1A, Length 283 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1A-203ENST00000525359 GPR182O15218 404 aa4.98□□□□□ -1.61
CLNS1A-203ENST00000525359 ADAM23O75077 832 aa4.98□□□□□ -1.61
CLNS1A-203ENST00000525359 H2AFB1P0C5Y9 115 aa4.98□□□□□ -1.61
CLNS1A-203ENST00000525359 H2AFB2P0C5Z0 115 aa4.98□□□□□ -1.61
CLNS1A-203ENST00000525359 NOS3P29474 1203 aa4.98□□□□□ -1.61
CLNS1A-203ENST00000525359 ATP2B2Q01814 1243 aa4.98□□□□□ -1.61
CLNS1A-203ENST00000525359 KIAA0319Q5VV43 1072 aa4.98□□□□□ -1.61
CLNS1A-203ENST00000525359 PEAR1Q5VY43 1037 aaPredicted RBP4.98□□□□□ -1.61
CLNS1A-203ENST00000525359 TMC7Q7Z402 723 aa4.98□□□□□ -1.61
CLNS1A-203ENST00000525359 CCNJLQ8IV13 435 aa4.98□□□□□ -1.61
CLNS1A-203ENST00000525359 GALNT11Q8NCW6 608 aa4.98□□□□□ -1.61
CLNS1A-203ENST00000525359 CLEC4MQ9H2X3 399 aaPredicted RBP4.98□□□□□ -1.61
CLNS1A-203ENST00000525359 SEMA6BQ9H3T3 888 aa4.98□□□□□ -1.61
CLNS1A-203ENST00000525359 SOX17Q9H6I2 414 aaPredicted RBP4.98□□□□□ -1.61
CLNS1A-203ENST00000525359 NPHS2Q9NP85 383 aa4.98□□□□□ -1.61
CLNS1A-203ENST00000525359 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP4.98□□□□□ -1.61
CLNS1A-203ENST00000525359 A0A096LPE4 126 aa4.97□□□□□ -1.61
CLNS1A-203ENST00000525359 A0A1W2PPZ6 126 aa4.97□□□□□ -1.61
CLNS1A-203ENST00000525359 SART1O43290 800 aaKnown RBP4.97□□□□□ -1.61
CLNS1A-203ENST00000525359 FGD1P98174 961 aa4.97□□□□□ -1.61
CLNS1A-203ENST00000525359 ZC3HAV1Q7Z2W4 902 aaKnown RBP4.97□□□□□ -1.61
CLNS1A-203ENST00000525359 KLHDC7BQ96G42 594 aa4.97□□□□□ -1.61
CLNS1A-203ENST00000525359 RNF208Q9H0X6 261 aa4.97□□□□□ -1.61
CLNS1A-203ENST00000525359 TREHO43280 583 aa4.96□□□□□ -1.62
CLNS1A-203ENST00000525359 CYP11A1P05108 521 aa4.96□□□□□ -1.62
CLNS1A-203ENST00000525359 NLRP12P59046 1061 aa4.96□□□□□ -1.62
CLNS1A-203ENST00000525359 GSTM4Q03013 218 aa4.96□□□□□ -1.62
CLNS1A-203ENST00000525359 PCDH1Q08174 1060 aa4.96□□□□□ -1.62
CLNS1A-203ENST00000525359 UVSSAQ2YD98 709 aa4.96□□□□□ -1.62
CLNS1A-203ENST00000525359 FOXD4L6Q3SYB3 417 aaPredicted RBP4.96□□□□□ -1.62
CLNS1A-203ENST00000525359 USPL1Q5W0Q7 1092 aa4.96□□□□□ -1.62
CLNS1A-203ENST00000525359 ANKRD34AQ69YU3 496 aa4.96□□□□□ -1.62
CLNS1A-203ENST00000525359 FDX2Q6P4F2 183 aa4.96□□□□□ -1.62
CLNS1A-203ENST00000525359 FOXD4L3Q6VB84 417 aaPredicted RBP4.96□□□□□ -1.62
CLNS1A-203ENST00000525359 VN1R5Q7Z5H4 357 aa4.96□□□□□ -1.62
CLNS1A-203ENST00000525359 ASB16Q96NS5 453 aa4.96□□□□□ -1.62
CLNS1A-203ENST00000525359 RUSC1Q9BVN2 902 aa4.96□□□□□ -1.62
CLNS1A-203ENST00000525359 USP26Q9BXU7 913 aa4.96□□□□□ -1.62
CLNS1A-203ENST00000525359 PNMA6FA0A0J9YX94 578 aa4.95□□□□□ -1.62
CLNS1A-203ENST00000525359 SOX1O00570 391 aaPredicted RBP4.95□□□□□ -1.62
CLNS1A-203ENST00000525359 DHX15O43143 795 aaKnown RBP4.95□□□□□ -1.62
CLNS1A-203ENST00000525359 ALX3O95076 343 aa4.95□□□□□ -1.62
CLNS1A-203ENST00000525359 ESRRAP11474 423 aaPredicted RBP4.95□□□□□ -1.62
CLNS1A-203ENST00000525359 XRCC5P13010 732 aaKnown RBP4.95□□□□□ -1.62
CLNS1A-203ENST00000525359 MAPK8P45983 427 aa4.95□□□□□ -1.62
CLNS1A-203ENST00000525359 PTPN12Q05209 780 aaKnown RBP4.95□□□□□ -1.62
CLNS1A-203ENST00000525359 RSPO4Q2I0M5 234 aaPredicted RBP4.95□□□□□ -1.62
CLNS1A-203ENST00000525359 NUTM2GQ5VZR2 741 aa4.95□□□□□ -1.62
CLNS1A-203ENST00000525359 AGGF1Q8N302 714 aaeCLIP4.95□□□□□ -1.62
CLNS1A-203ENST00000525359 FBF1Q8TES7 1133 aa4.95□□□□□ -1.62
CLNS1A-203ENST00000525359 TCF12Q99081 682 aa4.95□□□□□ -1.62
CLNS1A-203ENST00000525359 CYP4F12Q9HCS2 524 aa4.95□□□□□ -1.62
CLNS1A-203ENST00000525359 METTL12A8MUP2 240 aa4.94□□□□□ -1.62
CLNS1A-203ENST00000525359 DDX3YO15523 660 aaKnown RBP4.94□□□□□ -1.62
CLNS1A-203ENST00000525359 DYRK3O43781 588 aa4.94□□□□□ -1.62
CLNS1A-203ENST00000525359 GAS2O43903 313 aaKnown RBP4.94□□□□□ -1.62
CLNS1A-203ENST00000525359 GRIA4P48058 902 aa4.94□□□□□ -1.62
CLNS1A-203ENST00000525359 ENOX2Q16206 610 aaKnown RBP4.94□□□□□ -1.62
CLNS1A-203ENST00000525359 RPS26P11Q5JNZ5 115 aaPredicted RBP4.94□□□□□ -1.62
CLNS1A-203ENST00000525359 NKAPLQ5M9Q1 402 aa4.94□□□□□ -1.62
CLNS1A-203ENST00000525359 ALG1LQ6GMV1 187 aa4.94□□□□□ -1.62
CLNS1A-203ENST00000525359 PRPF40BQ6NWY9 871 aaKnown RBP4.94□□□□□ -1.62
CLNS1A-203ENST00000525359 ADAMTSL4Q6UY14 1074 aa4.94□□□□□ -1.62
CLNS1A-203ENST00000525359 DTHD1Q6ZMT9 781 aa4.94□□□□□ -1.62
CLNS1A-203ENST00000525359 Q6ZS46 218 aa4.94□□□□□ -1.62
CLNS1A-203ENST00000525359 KIAA1211Q6ZU35 1233 aa4.94□□□□□ -1.62
CLNS1A-203ENST00000525359 SND1Q7KZF4 910 aaKnown RBP eCLIP4.94□□□□□ -1.62
CLNS1A-203ENST00000525359 SLC51AQ86UW1 340 aa4.94□□□□□ -1.62
CLNS1A-203ENST00000525359 DZIP1LQ8IYY4 767 aaKnown RBP4.94□□□□□ -1.62
CLNS1A-203ENST00000525359 UBASH3BQ8TF42 649 aa4.94□□□□□ -1.62
CLNS1A-203ENST00000525359 FOXD4L4Q8WXT5 416 aaPredicted RBP4.94□□□□□ -1.62
CLNS1A-203ENST00000525359 UTP4Q969X6 686 aaKnown RBP4.94□□□□□ -1.62
CLNS1A-203ENST00000525359 MEGF10Q96KG7 1140 aa4.94□□□□□ -1.62
CLNS1A-203ENST00000525359 SSBP4Q9BWG4 385 aaPredicted RBP4.94□□□□□ -1.62
CLNS1A-203ENST00000525359 KCNK4Q9NYG8 393 aa4.94□□□□□ -1.62
CLNS1A-203ENST00000525359 TMEM238LA0A1B0GVL6 79 aa4.93□□□□□ -1.62
CLNS1A-203ENST00000525359 GIPC1O14908 333 aa4.93□□□□□ -1.62
CLNS1A-203ENST00000525359 GSC2O15499 205 aa4.93□□□□□ -1.62
CLNS1A-203ENST00000525359 ADAM11O75078 769 aa4.93□□□□□ -1.62
CLNS1A-203ENST00000525359 WISP1O95388 367 aa4.93□□□□□ -1.62
CLNS1A-203ENST00000525359 IGHA2P01877 340 aa4.93□□□□□ -1.62
CLNS1A-203ENST00000525359 ITPKAP23677 461 aa4.93□□□□□ -1.62
CLNS1A-203ENST00000525359 PPP2R3AQ06190 1150 aa4.93□□□□□ -1.62
CLNS1A-203ENST00000525359 AP3B2Q13367 1082 aa4.93□□□□□ -1.62
CLNS1A-203ENST00000525359 DSC3Q14574 896 aa4.93□□□□□ -1.62
CLNS1A-203ENST00000525359 SPRED3Q2MJR0 410 aa4.93□□□□□ -1.62
CLNS1A-203ENST00000525359 EPS8L3Q8TE67 593 aaKnown RBP4.93□□□□□ -1.62
CLNS1A-203ENST00000525359 CORO1BQ9BR76 489 aa4.93□□□□□ -1.62
CLNS1A-203ENST00000525359 SRCIN1Q9C0H9 1055 aa4.93□□□□□ -1.62
CLNS1A-203ENST00000525359 SPG7Q9UQ90 795 aa4.93□□□□□ -1.62
CLNS1A-203ENST00000525359 MEGF11A6BM72 1044 aa4.92□□□□□ -1.62
CLNS1A-203ENST00000525359 B3GALT4O96024 378 aa4.92□□□□□ -1.62
CLNS1A-203ENST00000525359 FCGRTP55899 365 aa4.92□□□□□ -1.62
CLNS1A-203ENST00000525359 GRM2Q14416 872 aa4.92□□□□□ -1.62
CLNS1A-203ENST00000525359 POU4F3Q15319 338 aa4.92□□□□□ -1.62
CLNS1A-203ENST00000525359 LARP7Q4G0J3 582 aaKnown RBP eCLIP4.92□□□□□ -1.62
CLNS1A-203ENST00000525359 EXOSC6Q5RKV6 272 aaKnown RBP4.92□□□□□ -1.62
CLNS1A-203ENST00000525359 PRR23CQ6ZRP0 262 aa4.92□□□□□ -1.62
CLNS1A-203ENST00000525359 C12orf50Q8NA57 414 aaPredicted RBP4.92□□□□□ -1.62
CLNS1A-203ENST00000525359 YIPF2Q9BWQ6 316 aa4.92□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms