RNA–Protein interactions for RNA: ENST00000525284.5

LRRK1-202, Transcript of leucine rich repeat kinase 1, humanhuman

TSL 1 (best)

Gene LRRK1, Length 6,494 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK1-202ENST00000525284 AP1ARQ63HQ0 302 aa15.38■□□□□ 0.05
LRRK1-202ENST00000525284 CCDC117Q8IWD4 279 aaPredicted RBP15.38■□□□□ 0.05
LRRK1-202ENST00000525284 ZC4H2Q9NQZ6 224 aa15.38■□□□□ 0.05
LRRK1-202ENST00000525284 GOLGA6AQ9NYA3 693 aa15.38■□□□□ 0.05
LRRK1-202ENST00000525284 WDR97A6NE52 1622 aa15.38■□□□□ 0.05
LRRK1-202ENST00000525284 EVCP57679 992 aa15.37■□□□□ 0.05
LRRK1-202ENST00000525284 FAM200AQ8TCP9 573 aa15.37■□□□□ 0.05
LRRK1-202ENST00000525284 CABP5Q9NP86 173 aa15.37■□□□□ 0.05
LRRK1-202ENST00000525284 TUBB4BP68371 445 aa15.37■□□□□ 0.05
LRRK1-202ENST00000525284 UTP14CQ5TAP6 766 aaKnown RBP15.37■□□□□ 0.05
LRRK1-202ENST00000525284 HHATQ5VTY9 493 aa15.37■□□□□ 0.05
LRRK1-202ENST00000525284 LRCH2Q5VUJ6 765 aa15.37■□□□□ 0.05
LRRK1-202ENST00000525284 MSANTD4Q8NCY6 345 aa15.37■□□□□ 0.05
LRRK1-202ENST00000525284 IFIT5Q13325 482 aaKnown RBP15.37■□□□□ 0.05
LRRK1-202ENST00000525284 TRIM6Q9C030 488 aaPredicted RBP15.37■□□□□ 0.05
LRRK1-202ENST00000525284 PDE4BQ07343 736 aa15.37■□□□□ 0.05
LRRK1-202ENST00000525284 NEK1Q96PY6 1258 aa15.37■□□□□ 0.05
LRRK1-202ENST00000525284 MYOM3Q5VTT5 1437 aa15.37■□□□□ 0.05
LRRK1-202ENST00000525284 NECAB1Q8N987 351 aa15.37■□□□□ 0.05
LRRK1-202ENST00000525284 CABS1Q96KC9 395 aa15.37■□□□□ 0.05
LRRK1-202ENST00000525284 STARD3NLO95772 234 aa15.37■□□□□ 0.05
LRRK1-202ENST00000525284 TUBB4AP04350 444 aa15.37■□□□□ 0.05
LRRK1-202ENST00000525284 SLF2Q8IX21 1173 aa15.37■□□□□ 0.05
LRRK1-202ENST00000525284 MPHOSPH6Q99547 160 aaKnown RBP15.37■□□□□ 0.05
LRRK1-202ENST00000525284 ZSCAN16Q9H4T2 348 aaPredicted RBP15.37■□□□□ 0.05
LRRK1-202ENST00000525284 GABPAQ06546 454 aa15.36■□□□□ 0.05
LRRK1-202ENST00000525284 ZKSCAN5Q9Y2L8 839 aa15.36■□□□□ 0.05
LRRK1-202ENST00000525284 HEATR3Q7Z4Q2 680 aa15.36■□□□□ 0.05
LRRK1-202ENST00000525284 JPH4Q96JJ6 628 aa15.36■□□□□ 0.05
LRRK1-202ENST00000525284 RILPQ96NA2 401 aa15.36■□□□□ 0.05
LRRK1-202ENST00000525284 TRIM31Q9BZY9 425 aa15.36■□□□□ 0.05
LRRK1-202ENST00000525284 CALM1P0DP23 149 aa15.36■□□□□ 0.05
LRRK1-202ENST00000525284 CALM2P0DP24 149 aa15.36■□□□□ 0.05
LRRK1-202ENST00000525284 CALM3P0DP25 149 aa15.36■□□□□ 0.05
LRRK1-202ENST00000525284 ZSCAN22P10073 491 aaPredicted RBP15.36■□□□□ 0.05
LRRK1-202ENST00000525284 KRT9P35527 623 aa15.36■□□□□ 0.05
LRRK1-202ENST00000525284 USP48Q86UV5 1035 aa15.36■□□□□ 0.05
LRRK1-202ENST00000525284 ZPR1O75312 459 aa15.35■□□□□ 0.05
LRRK1-202ENST00000525284 MCM10Q7L590 875 aa15.35■□□□□ 0.05
LRRK1-202ENST00000525284 SMAP1Q8IYB5 467 aaPredicted RBP15.35■□□□□ 0.05
LRRK1-202ENST00000525284 NCOA7Q8NI08 942 aa15.35■□□□□ 0.05
LRRK1-202ENST00000525284 MRPS27Q92552 414 aaKnown RBP15.35■□□□□ 0.05
LRRK1-202ENST00000525284 I3L4J1 428 aa15.35■□□□□ 0.05
LRRK1-202ENST00000525284 NCOA2Q15596 1464 aa15.35■□□□□ 0.05
LRRK1-202ENST00000525284 FRMD3A2A2Y4 597 aa15.35■□□□□ 0.05
LRRK1-202ENST00000525284 PTCD1O75127 700 aaKnown RBP15.35■□□□□ 0.05
LRRK1-202ENST00000525284 BAG2O95816 211 aa15.35■□□□□ 0.05
LRRK1-202ENST00000525284 KRT5P13647 590 aa15.35■□□□□ 0.05
LRRK1-202ENST00000525284 MAN1A1P33908 653 aa15.35■□□□□ 0.05
LRRK1-202ENST00000525284 ARHGAP25P42331 645 aa15.35■□□□□ 0.05
LRRK1-202ENST00000525284 RBBP5Q15291 538 aaKnown RBP15.35■□□□□ 0.05
LRRK1-202ENST00000525284 TSGA10Q9BZW7 698 aa15.35■□□□□ 0.05
LRRK1-202ENST00000525284 DACT1Q9NYF0 836 aa15.35■□□□□ 0.05
LRRK1-202ENST00000525284 ZNF652Q9Y2D9 606 aa15.35■□□□□ 0.05
LRRK1-202ENST00000525284 UTP11Q9Y3A2 253 aaKnown RBP15.35■□□□□ 0.05
LRRK1-202ENST00000525284 CUX1P39880 1505 aa15.34■□□□□ 0.05
LRRK1-202ENST00000525284 RNF34Q969K3 372 aa15.34■□□□□ 0.05
LRRK1-202ENST00000525284 SNRKQ9NRH2 765 aa15.34■□□□□ 0.05
LRRK1-202ENST00000525284 ANKRD30BQ9BXX2 1392 aa15.34■□□□□ 0.05
LRRK1-202ENST00000525284 SPOPO43791 374 aa15.34■□□□□ 0.05
LRRK1-202ENST00000525284 ALG1Q9BT22 464 aa15.34■□□□□ 0.05
LRRK1-202ENST00000525284 ARHGAP42A6NI28 874 aa15.34■□□□□ 0.05
LRRK1-202ENST00000525284 PDZD8Q8NEN9 1154 aa15.34■□□□□ 0.05
LRRK1-202ENST00000525284 TRIM4Q9C037 500 aa15.34■□□□□ 0.05
LRRK1-202ENST00000525284 STX8Q9UNK0 236 aa15.34■□□□□ 0.05
LRRK1-202ENST00000525284 SEC23IPQ9Y6Y8 1000 aaKnown RBP15.34■□□□□ 0.05
LRRK1-202ENST00000525284 KCNG4Q8TDN1 519 aa15.34■□□□□ 0.05
LRRK1-202ENST00000525284 RRS1Q15050 365 aaKnown RBP15.34■□□□□ 0.05
LRRK1-202ENST00000525284 DCAF17Q5H9S7 520 aaPredicted RBP15.34■□□□□ 0.05
LRRK1-202ENST00000525284 C8orf74Q6P047 294 aa15.34■□□□□ 0.05
LRRK1-202ENST00000525284 SMARCC2Q8TAQ2 1214 aa15.34■□□□□ 0.05
LRRK1-202ENST00000525284 CSRNP2Q9H175 543 aa15.34■□□□□ 0.05
LRRK1-202ENST00000525284 IFNKQ9P0W0 207 aa15.34■□□□□ 0.05
LRRK1-202ENST00000525284 GAPVD1Q14C86 1478 aa15.33■□□□□ 0.05
LRRK1-202ENST00000525284 PHEXP78562 749 aa15.33■□□□□ 0.05
LRRK1-202ENST00000525284 EVI5LQ96CN4 794 aa15.33■□□□□ 0.05
LRRK1-202ENST00000525284 KLF18A0A0U1RQI7 1052 aa15.33■□□□□ 0.04
LRRK1-202ENST00000525284 DUSP27Q5VZP5 1158 aa15.33■□□□□ 0.04
LRRK1-202ENST00000525284 RPAINQ86UA6 219 aa15.33■□□□□ 0.04
LRRK1-202ENST00000525284 RFX1P22670 979 aa15.33■□□□□ 0.04
LRRK1-202ENST00000525284 SESN3P58005 492 aa15.33■□□□□ 0.04
LRRK1-202ENST00000525284 SBDSQ9Y3A5 250 aaKnown RBP eCLIP15.33■□□□□ 0.04
LRRK1-202ENST00000525284 MGARPQ8TDB4 240 aa15.33■□□□□ 0.04
LRRK1-202ENST00000525284 LRRC2Q9BYS8 371 aa15.33■□□□□ 0.04
LRRK1-202ENST00000525284 TAOK1Q7L7X3 1001 aa15.33■□□□□ 0.04
LRRK1-202ENST00000525284 PSPC1Q8WXF1 523 aaKnown RBP15.33■□□□□ 0.04
LRRK1-202ENST00000525284 ATXN8OSP0DMR3 200 aa15.32■□□□□ 0.04
LRRK1-202ENST00000525284 ANKRD20A3Q5VUR7 823 aa15.32■□□□□ 0.04
LRRK1-202ENST00000525284 RPGRQ92834 1020 aaKnown RBP15.32■□□□□ 0.04
LRRK1-202ENST00000525284 RTL1A6NKG5 1358 aa15.32■□□□□ 0.04
LRRK1-202ENST00000525284 ERICH3Q5RHP9 1530 aa15.32■□□□□ 0.04
LRRK1-202ENST00000525284 PPP1R12AO14974 1030 aaPredicted RBP15.32■□□□□ 0.04
LRRK1-202ENST00000525284 ACTN4O43707 911 aaKnown RBP15.32■□□□□ 0.04
LRRK1-202ENST00000525284 NCBP1Q09161 790 aaKnown RBP15.32■□□□□ 0.04
LRRK1-202ENST00000525284 RILPL1Q5EBL4 403 aa15.32■□□□□ 0.04
LRRK1-202ENST00000525284 ABTB1Q969K4 478 aaPredicted RBP15.32■□□□□ 0.04
LRRK1-202ENST00000525284 WWC3Q9ULE0 1092 aa15.32■□□□□ 0.04
LRRK1-202ENST00000525284 ZBTB21Q9ULJ3 1066 aa15.32■□□□□ 0.04
LRRK1-202ENST00000525284 CCDC184Q52MB2 194 aa15.32■□□□□ 0.04
LRRK1-202ENST00000525284 SPDL1Q96EA4 605 aa15.32■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms