RNA–Protein interactions for RNA: ENST00000525209.5

CD44-213, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 4

Gene CD44, Length 574 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-213ENST00000525209 OSBPL7Q9BZF2 842 aa5.57□□□□□ -1.52
CD44-213ENST00000525209 CDH19Q9H159 772 aa5.57□□□□□ -1.52
CD44-213ENST00000525209 DNAJC25Q9H1X3 360 aa5.57□□□□□ -1.52
CD44-213ENST00000525209 MAP10Q9P2G4 905 aa5.57□□□□□ -1.52
CD44-213ENST00000525209 NOL7Q9UMY1 257 aaKnown RBP5.57□□□□□ -1.52
CD44-213ENST00000525209 CLSPNQ9HAW4 1339 aa5.56□□□□□ -1.52
CD44-213ENST00000525209 DYTNA2CJ06 578 aa5.56□□□□□ -1.52
CD44-213ENST00000525209 ZBTB39O15060 712 aa5.56□□□□□ -1.52
CD44-213ENST00000525209 SMAD7O15105 426 aaKnown RBP5.56□□□□□ -1.52
CD44-213ENST00000525209 AXIN1O15169 862 aa5.56□□□□□ -1.52
CD44-213ENST00000525209 RAPGEF3O95398 923 aa5.56□□□□□ -1.52
CD44-213ENST00000525209 AVPP01185 164 aa5.56□□□□□ -1.52
CD44-213ENST00000525209 SRGNP10124 158 aa5.56□□□□□ -1.52
CD44-213ENST00000525209 MYCLP1P12525 358 aaPredicted RBP5.56□□□□□ -1.52
CD44-213ENST00000525209 SOX5P35711 763 aa5.56□□□□□ -1.52
CD44-213ENST00000525209 HTR3AP46098 478 aa5.56□□□□□ -1.52
CD44-213ENST00000525209 GUCY2FP51841 1108 aa5.56□□□□□ -1.52
CD44-213ENST00000525209 PURAQ00577 322 aaKnown RBP5.56□□□□□ -1.52
CD44-213ENST00000525209 MLC1Q15049 377 aa5.56□□□□□ -1.52
CD44-213ENST00000525209 CCDC96Q2M329 555 aa5.56□□□□□ -1.52
CD44-213ENST00000525209 LARP7Q4G0J3 582 aaKnown RBP eCLIP5.56□□□□□ -1.52
CD44-213ENST00000525209 CCDC93Q567U6 631 aa5.56□□□□□ -1.52
CD44-213ENST00000525209 TNNI3KQ59H18 835 aa5.56□□□□□ -1.52
CD44-213ENST00000525209 KANK3Q6NY19 840 aa5.56□□□□□ -1.52
CD44-213ENST00000525209 SNIP1Q8TAD8 396 aaKnown RBP5.56□□□□□ -1.52
CD44-213ENST00000525209 MFSD3Q96ES6 412 aa5.56□□□□□ -1.52
CD44-213ENST00000525209 RSRP1Q9BUV0 290 aa5.56□□□□□ -1.52
CD44-213ENST00000525209 SRRTQ9BXP5 876 aaKnown RBP5.56□□□□□ -1.52
CD44-213ENST00000525209 NGRNQ9NPE2 291 aaKnown RBP5.56□□□□□ -1.52
CD44-213ENST00000525209 LUZP4Q9P127 313 aa5.56□□□□□ -1.52
CD44-213ENST00000525209 FAM8A1Q9UBU6 413 aa5.56□□□□□ -1.52
CD44-213ENST00000525209 POLG2Q9UHN1 485 aa5.56□□□□□ -1.52
CD44-213ENST00000525209 ASAP1Q9ULH1 1129 aa5.56□□□□□ -1.52
CD44-213ENST00000525209 NUB1Q9Y5A7 615 aa5.56□□□□□ -1.52
CD44-213ENST00000525209 PTCH2Q9Y6C5 1203 aa5.56□□□□□ -1.52
CD44-213ENST00000525209 ATAD2Q6PL18 1390 aa5.55□□□□□ -1.52
CD44-213ENST00000525209 A0A087X0B3 334 aa5.55□□□□□ -1.52
CD44-213ENST00000525209 GOLGA6CA6NDK9 693 aa5.55□□□□□ -1.52
CD44-213ENST00000525209 GOLGA6BA6NDN3 693 aa5.55□□□□□ -1.52
CD44-213ENST00000525209 DHX16O60231 1041 aaKnown RBP5.55□□□□□ -1.52
CD44-213ENST00000525209 HIP1RO75146 1068 aa5.55□□□□□ -1.52
CD44-213ENST00000525209 CCNYL3P0C7X3 344 aa5.55□□□□□ -1.52
CD44-213ENST00000525209 GOLGA6DP0CG33 693 aa5.55□□□□□ -1.52
CD44-213ENST00000525209 POLD1P28340 1107 aa5.55□□□□□ -1.52
CD44-213ENST00000525209 GFOD2Q3B7J2 385 aa5.55□□□□□ -1.52
CD44-213ENST00000525209 LINC01559Q495D7 138 aa5.55□□□□□ -1.52
CD44-213ENST00000525209 CT47A1Q5JQC4 288 aaPredicted RBP5.55□□□□□ -1.52
CD44-213ENST00000525209 FAM102BQ5T8I3 360 aa5.55□□□□□ -1.52
CD44-213ENST00000525209 CC2D1AQ6P1N0 951 aaPredicted RBP5.55□□□□□ -1.52
CD44-213ENST00000525209 ATCAYQ86WG3 371 aa5.55□□□□□ -1.52
CD44-213ENST00000525209 CPXCR1Q8N123 301 aa5.55□□□□□ -1.52
CD44-213ENST00000525209 TTC30BQ8N4P2 665 aa5.55□□□□□ -1.52
CD44-213ENST00000525209 HPS1Q92902 700 aa5.55□□□□□ -1.52
CD44-213ENST00000525209 NINJ1Q92982 152 aa5.55□□□□□ -1.52
CD44-213ENST00000525209 NUDT16Q96DE0 195 aaKnown RBP5.55□□□□□ -1.52
CD44-213ENST00000525209 ERP27Q96DN0 273 aa5.55□□□□□ -1.52
CD44-213ENST00000525209 CAMKK2Q96RR4 588 aa5.55□□□□□ -1.52
CD44-213ENST00000525209 ZNF358Q9NW07 568 aa5.55□□□□□ -1.52
CD44-213ENST00000525209 GOLGA6AQ9NYA3 693 aa5.55□□□□□ -1.52
CD44-213ENST00000525209 CLIC5Q9NZA1 410 aa5.55□□□□□ -1.52
CD44-213ENST00000525209 GMPR2Q9P2T1 348 aaKnown RBP5.55□□□□□ -1.52
CD44-213ENST00000525209 GTF2A1LQ9UNN4 478 aa5.55□□□□□ -1.52
CD44-213ENST00000525209 DAAM1Q9Y4D1 1078 aa5.55□□□□□ -1.52
CD44-213ENST00000525209 CTDP1Q9Y5B0 961 aaPredicted RBP5.55□□□□□ -1.52
CD44-213ENST00000525209 E2F8A0AVK6 867 aa5.54□□□□□ -1.52
CD44-213ENST00000525209 KATNA1O75449 491 aa5.54□□□□□ -1.52
CD44-213ENST00000525209 ALDH1A1P00352 501 aa5.54□□□□□ -1.52
CD44-213ENST00000525209 USP17L7P0C7H9 530 aa5.54□□□□□ -1.52
CD44-213ENST00000525209 TRIM27P14373 513 aa5.54□□□□□ -1.52
CD44-213ENST00000525209 TERF1P54274 439 aa5.54□□□□□ -1.52
CD44-213ENST00000525209 PIN1Q13526 163 aaPredicted RBP5.54□□□□□ -1.52
CD44-213ENST00000525209 C21orf62-AS1Q17RA5 79 aa5.54□□□□□ -1.52
CD44-213ENST00000525209 LONRF1Q17RB8 773 aa5.54□□□□□ -1.52
CD44-213ENST00000525209 AKAP4Q5JQC9 854 aa5.54□□□□□ -1.52
CD44-213ENST00000525209 KRT77Q7Z794 578 aa5.54□□□□□ -1.52
CD44-213ENST00000525209 RNF180Q86T96 592 aa5.54□□□□□ -1.52
CD44-213ENST00000525209 SUGP1Q8IWZ8 645 aaKnown RBP5.54□□□□□ -1.52
CD44-213ENST00000525209 NIM1KQ8IY84 436 aa5.54□□□□□ -1.52
CD44-213ENST00000525209 STK11IPQ8N1F8 1099 aa5.54□□□□□ -1.52
CD44-213ENST00000525209 CRIPAKQ8N1N5 446 aa5.54□□□□□ -1.52
CD44-213ENST00000525209 MAGEB6Q8N7X4 407 aa5.54□□□□□ -1.52
CD44-213ENST00000525209 ENAHQ8N8S7 591 aaPredicted RBP5.54□□□□□ -1.52
CD44-213ENST00000525209 ANKRD42Q8N9B4 389 aa5.54□□□□□ -1.52
CD44-213ENST00000525209 ARMC2Q8NEN0 867 aa5.54□□□□□ -1.52
CD44-213ENST00000525209 SHDQ96IW2 340 aa5.54□□□□□ -1.52
CD44-213ENST00000525209 TSPAN18Q96SJ8 248 aa5.54□□□□□ -1.52
CD44-213ENST00000525209 NOC4LQ9BVI4 516 aaKnown RBP5.54□□□□□ -1.52
CD44-213ENST00000525209 NT5C1AQ9BXI3 368 aa5.54□□□□□ -1.52
CD44-213ENST00000525209 RTFDC1Q9BY42 306 aaPredicted RBP5.54□□□□□ -1.52
CD44-213ENST00000525209 ST7Q9NRC1 585 aa5.54□□□□□ -1.52
CD44-213ENST00000525209 NAP1L2Q9ULW6 460 aaPredicted RBP5.54□□□□□ -1.52
CD44-213ENST00000525209 AKAP2Q9Y2D5 859 aa5.54□□□□□ -1.52
CD44-213ENST00000525209 PDGFAP04085 211 aa5.53□□□□□ -1.52
CD44-213ENST00000525209 EIF4A3P38919 411 aaKnown RBP5.53□□□□□ -1.52
CD44-213ENST00000525209 SARSP49591 514 aaKnown RBP5.53□□□□□ -1.52
CD44-213ENST00000525209 PPM1FP49593 454 aaPredicted RBP5.53□□□□□ -1.52
CD44-213ENST00000525209 WNT7BP56706 349 aa5.53□□□□□ -1.52
CD44-213ENST00000525209 GEMIN4P57678 1058 aaKnown RBP5.53□□□□□ -1.52
CD44-213ENST00000525209 SH3BP2P78314 561 aa5.53□□□□□ -1.52
CD44-213ENST00000525209 APOBRQ0VD83 1088 aa5.53□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms